Trachemys scripta elegans (red-eared slider): 117879239
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Entry
117879239 CDS
T07347
Symbol
RMI1
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117879239 (RMI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117879239 (RMI1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117879239 (RMI1)
FA (Fanconi anemia) pathway
117879239 (RMI1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
117879239
NCBI-ProteinID:
XP_034630170
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All DBs
Position
6:complement(86974196..86979922)
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AA seq
620 aa
AA seq
DB search
MSASSVAGKVETWLSSTWHVKVPLTWLEACINWIQQENGCNLTQAQINKQVFEQWLLTDL
RDLDYPVLPNCILDGPKGELNGFYSIQIDSLVDVSQPAYSQLQKIRGKNTVNEEVTANTQ
ATQKSWEAKPTRMLMLQLTDGIHQIQGMEYQPVPVLHSNLPPGTKITIQGKTAYRLGVLL
LKSENVKLLGGEVDALLEEYAQERVLARLIGEAENPNPVKQHDHKQGILGAVDELGQTLG
PSDEELLASLDENDEFTINHVIPLESGYCSRSNNSDTATHLLLSSNENYSQQGFGIFLPG
ANEEQSVPAVAYVDGDLDDLSLEDDLFLEEEIQEEIQTVQLPVVNKTIDIITQRLSHMPR
SSLSYTSEKDGRVQLDSVSKEKSCGSELSVGDESSTSNFSLHHNVQHSQSFSNFSSLENV
LEQKCNKIDVVKSSQKNCSFSGSRLLNKRPVKKTDSEINKQNYCVQTFSYRTTEKCKSLE
LDSPPFTYISVLLANTPETVTTVKVKAFIVTLTGNLTSCSGFWSIMAKISDGTAYLEVDI
ADEILTSLIGFSVPEMKQLRKDPILHQKLKNGLQKCQRELIDLCCLMTIEFNPFQSKATV
LILQDVDAVDLENLKKRLDK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatctagtgttgcaggaaaagtggaaacctggctttcttctacgtggcatgtt
aaagttcctctgacttggctagaagcttgtattaactggatccaacaagaaaatggttgt
aatttaactcaagctcagattaacaaacaggtatttgagcagtggcttcttacagatctg
agagatttggactatcctgttttgcctaactgcatcttagatggtccaaaaggagaactg
aatggcttttattccatacagattgattcactggtggatgttagccagcctgcgtattcc
cagttgcaaaagataagaggaaaaaatactgtaaatgaagaagtaacagccaacactcag
gcaacccaaaagtcctgggaagcaaagcctactcgaatgctgatgctgcagctaactgat
ggaatacatcaaattcagggtatggaataccaacccgttcctgtcctccatagtaatctt
ccaccaggtacaaaaattacaatacagggtaagactgcatatcgtcttggagttcttttg
ctaaaatcagaaaatgtgaaattgttggggggcgaagtagatgctcttttagaagagtat
gctcaggaaagagtccttgccagattaattggagaagctgagaaccctaatcctgtcaag
cagcatgatcataaacaaggaattttaggagcggttgatgaactaggacaaactctagga
ccttcagatgaagagcttctagcaagtcttgatgaaaatgacgaatttaccataaatcat
gtgattcctttagaaagtggatattgtagcagaagtaataactcagatacagccactcat
ttgctcctttcaagcaatgaaaactactcacaacagggatttgggatcttcttgcctggg
gcaaatgaagaacaaagtgttccagctgtggcatatgttgatggagatttagatgacctc
tcattggaagatgacttgtttttagaagaagagatccaagaagaaattcagacagtgcag
ttaccggtggtaaacaaaaccatagatataattacacaaagactttcacatatgcctaga
tcttcactaagttacacatctgaaaaagatggcagggttcagttggattcagttagcaaa
gaaaaatcctgtgggagtgaactgtctgttggtgatgaaagtagtacaagtaatttttca
ctacaccataatgtacaacactcccagagctttagcaatttctcctccttggaaaatgtt
cttgaacagaagtgtaataaaatagatgtagttaagagcagtcaaaaaaattgtagtttt
tctggcagcagattgttaaacaaaagaccagttaaaaaaactgattcagagataaacaaa
caaaattattgtgtacaaaccttttcttacagaacaacagagaaatgcaaaagtcttgag
ttagattccccaccttttacatatatttctgttctacttgcaaataccccagaaactgtt
acaacagtgaaagttaaagcttttattgtaacccttactggaaatctcacaagctgcagt
ggcttctggagtataatggcaaaaatctctgacggtaccgcttatctagaggtagacatt
gctgatgaaattctaacaagcttaattggattttcagtgcctgaaatgaaacagttaagg
aaagatcccattctacatcaaaagcttaagaatggtttacagaaatgccaaagagaactg
atagatctttgttgtttgatgactattgaatttaacccctttcaatctaaagcaacagta
ctaattttacaagatgttgatgcagtagatctagaaaacttgaagaaacgtttagataaa
taa
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