Trachemys scripta elegans (red-eared slider): 117879253
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Entry
117879253 CDS
T07347
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 12-like isoform X1
KO
K08626
a disintegrin and metalloproteinase with thrombospondin motifs 12 [EC:3.4.24.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117879253
Peptidases and inhibitors [BR:
tst01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117879253
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
TSP1_CCN
TSP1_spondin
ADAMTS_CR_3
Reprolysin_5
Reprolysin_3
Reprolysin_2
Reprolysin_4
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
117879253
NCBI-ProteinID:
XP_034630196
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All DBs
Position
6:complement(21142219..21283736)
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AA seq
1368 aa
AA seq
DB search
MIEYHGSDNVESYILTIINMVTGLFHDPSIGNAIHIVLVRLILLEEEERGLKIVHHADKT
LASFCKWQKSINPKNDVNPIHHDVAVLLTRKDICAGMNRPCETLGLSHLSGMCQPHRSCN
INEDSGLPLAFTIAHELGHSFGIQHDGKENDCEPVGRHPYIMSRQLQYDPSPLTWSPCSK
EYITRFLDRGWGFCLDDIPKKKDLKSPLIAPGVIYDVHHQCQLQYGPTATFCEEVDNICQ
TLWCSVKGSCRSKLDAAADGTRCGEKKWCFNAECITVGKNPEMINGGWGTWSSWSHCTRT
CGAGVQSAERPCNNPEPQFGGKYCTGERKRYRMCNILPCRRDTPTFRQMQCSEFDTVPYK
NEFYQWIPVYNTANLCELHCRPVDGQFSEKMLDAVTDGTPCFEGRNIRDICINGMCKTIG
CDYEINSNATEDRCGVCLGDGSACQTVKMMFNQSEGLGYVDIGLIPKGARDIRVVEVAEA
GNFLAVRSEDPQKYYLNGGFIIQWNGAYKVAGTTFQYERKGDLENLTASGPTNESVWIQL
LFQENNPGIKYEYTIRKEGNLENEVGDPEYFWQYGGWTDCSVTCGRGVQRQTAQCVKRGG
SVIKNSFCDPEMQPNGRQKKCNEKDCPPRWWTGEWQKCSTTCGPTGEKKRTVLCIQTVGS
DEQALAAKDCQHLLKPKTHLSCNRDVLCPSDWTVSNWTECTVTCGGGIRTRKINCAKNND
EPCDMFKRPNSKALCGLQQCPSTRRLLIPPLKPNRGKIIIRKTAINPKRGPSGRIPIPKL
GQRYQTTTKIPESQSTTALGSTSSSPIHSSKKDNMEKRTLQNNSTRSNNDYNYPFVFNGN
RSHQDNTVSNSSSMENIGNVQNVSNIDSASEGGLVQIGGASRTTSLTRNPEVTPGYDYLT
EESDNTDWSIEGNEKTIDISYNAKSSPAIKTRSKTPNIRSHVITTPNISPTFYQHESSTQ
STSSTAAERLSPSTKVNLKRIGVQIDTPVIEKATTKGPVTIKPAMLDNVSRAQFENGTEM
EPSDKIDYTQSTKSPSLEDSPKNHSTVSEGKLPNATEWDYARISSILHGDVYWIVGNWSE
CSTTCGVGAFWRQVECSSKNESDCQHIKKPDPARRCHLRPCANWKTGSWSKCSTNCGGGF
KTHDVHCTDVRNKRVLRPFHCQLLEHKPQLSISCNTEPCLEWRVEPWNKCSKTCGGGLQE
RHVYCPEEDYCDWTKKPNSTAHCNGQPCTRWINGTWSSCTASCGGGLQQRTVKCINTEDN
EAEDQTMCEHELKPPGSQKCNMQECRKSAGLLCHKDKLSINFCQRLKRIGKCLVPSIQTQ
CCFTCNRPQIPNKTRSGNQQRFKEQNYTKPRRKLSPIKKSNSQPPAGH
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatatcatggaagtgacaatgtggaatcctacatcctcactataataaatatg
gtcacaggattgttccatgatccaagcattggcaatgcaatccacatcgtgctcgtccgc
cttattcttcttgaagaggaagagcgaggcttgaaaatagttcatcatgcagacaagaca
ttagccagcttctgcaaatggcagaaaagcatcaatcccaaaaatgatgtcaacccaata
catcacgatgtagctgtacttttaactagaaaggacatctgtgctggcatgaatcgtcct
tgtgaaaccttaggtttgtctcatctgtctggtatgtgccaacctcaccggagctgtaat
attaatgaagattctgggctgcctttggcattcactattgcacatgagcttggacacagt
tttggtatccagcatgatggaaaagagaatgactgtgaacctgttggaagacatccatac
attatgtcccggcagctacagtatgatccttctccactcacctggtccccgtgcagcaag
gaatacatcacacgtttcctagaccgaggatggggattctgtctagatgatatccccaaa
aagaaagatttaaagtcaccacttattgccccaggagttatctatgatgtacatcaccaa
tgccagttgcagtacggccccactgctactttctgtgaagaggtggataatatttgccag
acactctggtgctcagtgaaaggttcctgccgctcaaaactggatgctgccgcagatgga
actagatgtggagaaaagaagtggtgcttcaacgcggagtgcattacagtgggaaagaat
ccagaaatgataaatggtggatggggcacatggtcctcctggtcccattgcacacggaca
tgtggggcaggagttcaaagcgcagaaagaccctgcaataacccagagccacagtttgga
ggaaagtattgcactggagaaaggaaacgctaccgcatgtgtaacattctcccatgtcga
cgagacacaccaacctttcgtcagatgcaatgcagtgaatttgacacagttccctacaag
aatgaattctaccagtggattccagtttataacacagctaatctgtgtgagctccactgc
cgccctgtagatggccaattttcagagaaaatgctggatgcagttactgatgggactcct
tgctttgaaggcagaaacatccgagatatctgtattaatggcatgtgtaagactattggc
tgtgattatgagataaattccaatgcaactgaagatcgatgcggagtttgcctaggagat
ggatctgcttgtcagacagtgaagatgatgttcaatcaaagtgaaggattaggctatgtt
gacattggactgattccaaaaggagcaagggacataagagtagtagaagtggcagaagca
ggaaatttccttgcagtgcggagtgaagacccacaaaagtattacctaaatgggggattt
attatccagtggaatggagcatacaaagtggcaggaacaacatttcaatatgagagaaaa
ggagatctcgaaaacctgacagcatctggacccaccaatgagtcagtgtggatacagcta
ctctttcaggaaaataaccccggaataaagtatgaatacactatacgtaaagaaggaaac
cttgagaatgaagtaggggacccagaatatttttggcaatatggaggctggacggattgc
agtgtaacatgtggaagaggtgttcagcgacagacagcccaatgtgtgaaaaggggggga
agtgtgatcaaaaactccttctgtgacccagaaatgcagccaaatggacgacaaaagaaa
tgcaatgaaaaggattgtccacccaggtggtggacaggagaatggcagaagtgttcaacc
acctgtggcccaacaggagagaagaaacgaactgtcctttgcatccaaacagtgggatct
gatgagcaggcattggctgctaaagactgccagcatctgcttaaaccaaagacccacctt
tcatgcaacagagatgttctatgcccatctgactggacagtgagcaactggactgagtgc
acagttacgtgtggcggtgggatacggactcgtaaaatcaattgtgctaaaaacaatgat
gaaccgtgtgatatgttcaagagaccaaattctaaggctctgtgtggcctccagcagtgt
ccttccaccagacgactattgatacccccactgaaaccaaacagaggaaagatcataatc
aggaagacagcaattaatcccaaaagaggcccatcaggcagaatacccatcccgaaacta
ggccaaagataccagacaacaacaaagatacccgagtcccaaagcacaactgctttgggc
tctacttcctccagtcctatccactcttccaaaaaggacaacatggaaaaaagaacatta
caaaataattctaccagatcaaataatgattataattatccctttgtgtttaatggaaac
aggtcacaccaagataatactgtaagtaatagttcaagtatggaaaatataggaaatgtc
caaaatgtctctaacatagactctgcttcagaagggggccttgttcagataggaggggct
agtcgcaccacctcattaaccagaaatccagaagtaactccaggctatgattatttaact
gaagagtctgacaatactgattggtccatagaaggcaatgaaaaaactattgacatctct
tacaatgccaaaagcagccctgcaatcaaaaccaggagcaaaactccaaacatcaggtct
catgtcattactactcccaacatctcaccaacattttatcaacatgaatcttctacacag
tctactagtagcacagcagcagaaagactgtcaccttcaacaaaagtgaacctaaaacgt
atcggtgtgcaaatagatacacctgtcatagaaaaagccaccacaaaaggaccggttaca
ataaaaccagcaatgttagataacgtatcaagagcccagtttgaaaatggaacagaaatg
gaaccctctgacaagatagattatacccaaagcacaaaatctccaagtcttgaagattct
ccaaagaaccacagtacagtttctgagggaaaattacccaatgccacagaatgggactat
gcaagaatctccagtattttgcatggtgatgtgtactggatagtggggaactggagtgag
tgttctaccacttgtggtgtgggggctttttggagacaggtggaatgtagcagtaagaat
gaatctgactgtcagcacattaaaaaacctgaccctgcaagaagatgtcatctccgtcca
tgtgctaactggaaaacaggatcctggagcaagtgctctacaaactgtggtggtggtttc
aagacccatgatgttcactgtactgatgttcgtaataagcgagttctacggccttttcac
tgccaattattagaacataaaccacaactgagcattagctgtaatacagagccctgcttg
gaatggcgtgtggagccttggaataagtgttcgaaaacatgtggtggtggcctgcaagaa
agacacgtctactgcccagaagaggactattgtgactggacgaaaaagcctaactccacg
gcacactgcaatgggcagccttgtactcggtggataaatgggacgtggagttcgtgcact
gcttcctgtggagggggccttcagcaaagaacagtaaagtgcatcaacacagaagataac
gaagctgaagatcaaactatgtgtgagcacgagctcaagcctccaggatctcagaaatgc
aatatgcaagagtgcaggaaaagtgcaggcctgctgtgccacaaggacaagctgtccatt
aatttctgccagagactgaagcggattggcaaatgtttggtgccatcaatacagactcag
tgctgcttcacctgtaacaggccccaaattcctaacaaaacaagatctggaaatcaacag
cgcttcaaagaacaaaattacaccaaacccagaagaaaattgtctccaatcaaaaaaagc
aacagccaacctcctgctgggcactag
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