Trachemys scripta elegans (red-eared slider): 117879263
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Entry
117879263 CDS
T07347
Symbol
RIC1
Name
(RefSeq) RAB6A-GEF complex partner protein 1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117879263 (RIC1)
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
117879263 (RIC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_WDR3_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
117879263
NCBI-ProteinID:
XP_034630216
LinkDB
All DBs
Position
6:complement(87575099..87661646)
Genome browser
AA seq
1420 aa
AA seq
DB search
MYFLSGWPKRLRCPLETLEQPLHIQTDPQRAFFAVLSPSQLSIWYSRPSVLIVSYKELSK
PASQFGPYKQAEWRPDSTMIAVSTANGYILFFDIPSSRDKYLYEPVYSKGSPHVKGTPRY
KEEQCAPSLNLEMKKVLDLQASITSLQSMLEDLLVATADGLLHLIHWDGMTNGRKAINLS
TVPFSVDLQSSRAGSFSGFEDVHIRDMEYCATLDGFAAVFNDGRVGFITPISSRFTAEQL
RGVWAQDVFDGTCVAVNNKYRLMAFGCANGSVQVYTIDNSTGAMQLSHKLELTPKQYPDI
WNKTGPVKLMRWSPDNCVVMVTWECGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPLKI
NSMSWGSEGYHLWVIDGNCSLNAGCDIDTKNEAHQLGILQFQFIKSALTANTCMSNQEQV
LLQGEDRLYLNCGDATQAQNPRSASAHSDHKPIRERGPFLEGSLDSQGLSTLLGHRHWHV
VQIHSTYLESNWPIRFSAIDKLGQNVAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTG
GIAWWNDFIVLACYNLSDRQEELRIYLRTSNLDNAFAHVTKVQAETLLLSVFRDIVILFR
ADCSICLYSIERQPDGPNPTASIQVLQEVSMSRYIPHPFLVVSVTLTSVRTETGISLKMP
QQACEAESIMLNLAGQLIMVQRDRSGPQIREKDSSPNQRKLLPFCAPVVLAQSVENVWTT
CRANKQKRHLLEALWLSCGGSGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLF
EDALVLGAVNDTVLYDCLYTHSSARQHLEVLFPFCIVERTSQIYLHHILRQLLVRNLGEQ
ALLLAQSCATLPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVH
CARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLF
NTALEQGKWDLCRHMIRFLKAIGSGESETPPPTPTTQEPSSTGGFEFFRHRSISLSQSAE
NLPANKFNLQKTLSMPSGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEEIRLKDLGCFA
AQLGFELIGWLCKERARAAHVEDFVIALKRLHKDFLWPFPVIPACSVNSPFKNGKYKTAV
GEQLLKSQSADSFLNVEMDTGVSSAPQSHSWLSTINSSQREMDTLSSHGPHMQDAFLSPL
LNKGDECSIGSATDLTETSSIVDGDWTMVDENISTLSLTQSELEHLSLELASKGPHKSQV
QLRYLLHIFMEAGCLDWCIIIGLILRESSIINQVFIIMQSSDADGEIWQNIKTGLHAVDR
WASTDCPGYKPFLNVIKPQLQKLSEISEEQVQPEAFQPVNPCKVTEQASPRAEESRSLTC
HSTSPQSDSGSSSVSRHEEDMSGAEEEDPLQEGSYDCTVS
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcctgagcggctggcccaagaggctgcggtgccctctggagaccctggagcag
ccgctgcacatccagacggacccccagagggctttcttcgcagtgctgtccccgtcccag
ctcagcatctggtatagcagacccagtgtattaattgtaagctacaaggaactatcaaaa
ccagcttctcagtttggaccctataagcaagcagaatggaggcctgacagcaccatgata
gctgtttcaactgcaaatggatacatcttattttttgatattccatcctcaagggacaag
tatctttatgagcctgtgtattccaaaggaagcccacatgtgaaggggacgccacgttat
aaggaagagcaatgtgctccttcgttaaatctagagatgaagaaagtgctggatttgcaa
gcatctatcaccagtttgcagtccatgctggaggacctactggttgctactgctgatgga
ttgctccaccttattcactgggatggcatgacaaatggaaggaaggccatcaacctatct
acagtaccattttctgtagacctgcagtcttctcgagcaggttcattctcgggctttgaa
gatgtacacattagagatatggaatattgtgccacacttgatgggtttgctgctgttttt
aatgatggcagagttggtttcattaccccaatatcaagtagattcacggctgagcagctc
cgtggtgtttgggcacaagatgtttttgatggaacttgtgtggcagtaaataacaaatac
agattaatggcatttggatgtgctaatggctctgtgcaagtttatacaatagataactcc
acaggagccatgcagttgtctcataagttggagctgacaccaaaacagtatcctgatatt
tggaacaaaacaggacctgtaaaactgatgaggtggtctcctgataactgtgttgttatg
gttacgtgggaatgtggaggcttgtccttatggagcgtttttggtgcccagcttatctgt
actttgggaggagattttgcttatcggtctgatggtaccaaaaaagaccctctaaaaatc
aactctatgagctggggttcagaaggctatcacctatgggtgatcgatgggaattgttct
ctgaatgcagggtgtgatatagataccaagaacgaagctcatcaacttggtattctgcaa
tttcagttcatcaagagtgcactcactgctaacacttgcatgagtaaccaggagcaggtc
ctcctgcaaggagaagatcgcttgtatttgaactgtggggatgcaacacaggcccagaat
cccagaagtgcttcagcacactctgatcataagcccatcagggaaaggggcccatttttg
gagggcagtttagattctcagggtttaagcactttattaggacataggcattggcatgtt
gtacagattcacagtacatatctagagagcaactggcctataaggttttcagccattgac
aagctggggcagaatgtagctgttgttggcaagtttggttttgcacattattctttactc
accaaaaaatggaagttgtttgggaacattacccaggagcaaaatatgattgtaacaggt
ggcatagcctggtggaatgatttcattgttcttgcatgttataatttaagtgaccgccaa
gaagagctaagaatctacctgcgaacatccaatctggacaatgcatttgcacatgtcacc
aaagtgcaggcagaaacattactactcagtgtcttccgggatatagtaatattgtttaga
gcagattgttctatttgcctttatagtattgaaagacaacctgatggtcctaaccctact
gccagtattcaagttcttcaggaggtatccatgtctcgttacattcctcatcctttcctt
gttgtttctgtaactctgacatcggtgagaacagagactggcatcagcttgaaaatgcca
cagcaggcctgtgaggcagaaagcattatgttaaacttagcaggacaactcatcatggta
caaagggatcggtctggcccccagatacgagagaaggacagcagtcctaaccaaaggaaa
cttctgcctttttgtgctccagttgtgctagcccagtcggttgaaaatgtttggactacc
tgtagggcaaacaaacaaaagcgccacttactggaggcactctggctcagctgtggtggg
tcaggtatgaaagtctggcttcctttgtttcccagggatcaccgcaaaccacattctttt
ttgtcaagacggatcatgctgcctttccacatcaacatataccccttggctgttctgttt
gaagatgccttggttcttggtgctgtcaatgacactgtactctacgactgtttatacact
cacagcagtgctagacaacatttggaggtcctctttcctttctgtattgttgagagaacc
tctcagatctacctccatcacattttgcgccagcttttggtgaggaacctaggagagcaa
gccttgcttttggcccagtcctgtgccacattaccttactttcctcatgtgctagaactg
atgcttcatgaagtgctggaagaagaagctacctcgcgggagcccattcccgaccctctg
cttcccactgtggctaagttcattacagagttcccccttttcctgcagacagttgttcat
tgtgctaggaagacagaatatgccctgtggaattacctttttgctgctgttggaaaccca
aaagacttatttgaggagtgcttaatggcccaggacttagacacagctgcctcttacctt
attatcctacagaacatggaggttccagcagttagtaggcaacatgccactcttctgttc
aacactgccctggagcagggaaagtgggacctttgtcgtcacatgatcagatttcttaaa
gccattggttctggtgaatcagagactccgccaccaacacccacaactcaggaacccagc
tcaactggtggctttgagttcttcagacatcgcagcattagtttatctcaatcagcagag
aatcttcctgctaacaaatttaatctacagaaaacactgagcatgccttccggtccatct
gggaaaaggtggagtaaagacagtgactgtgctgagaatatgtacattgatatgatgctc
tggcgtcatgctcgacgcttgctggaggaaatcaggcttaaagaccttggatgcttcgct
gcgcaactaggctttgagctgattggttggctgtgtaaggagcgagcccgagctgcccat
gtggaggattttgtgattgccttgaagagactacacaaagactttctctggccatttcca
gtcataccagcttgctctgttaattcacctttcaagaatggaaagtacaagacagctgtt
ggagagcagctgctcaagtcccagtctgcagacagctttttaaatgtggaaatggacacg
ggggtctcaagtgcacctcagagtcacagctggcttagcaccatcaattcctcccagaga
gaaatggacacactttcatcccatggacctcacatgcaagatgcattcctctctccttta
ttaaataaaggtgatgaatgcagcattggttcagcaacagacctgacagaaacaagttct
attgtggatggtgactggaccatggtggatgaaaacatctccactctaagtttaacacag
tcagagctggaacatctctctctggaattggctagtaaagggccacacaagtcacaggtc
caactacggtatttgctacacatcttcatggaagcaggatgtctggactggtgcattatc
ataggccttattctcagagaatcttcaataatcaaccaggtttttatcataatgcagtcc
tctgatgccgatggagagatctggcagaatatcaagactgggctacatgctgtagacaga
tgggcttccacagattgccctgggtacaagccatttttaaatgtcatcaagccacagctc
cagaaactaagtgagatatcagaagagcaagtgcagcctgaagcttttcaaccagtgaac
ccttgtaaggttactgaacaagccagcccaagggcagaggaaagccggagtttgacctgc
catagcactagccctcagagtgatagtggaagtagcagtgtgagtcgacatgaagaggac
atgtctggggcagaggaggaggatcctctccaggaaggcagttatgactgcactgtatcc
taa
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integrated database retrieval system
