KEGG   Trachemys scripta elegans (red-eared slider): 117879265
Entry
117879265         CDS       T07347                                 
Name
(RefSeq) interferon kappa-like
  KO
K05414  interferon alpha
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst04060  Cytokine-cytokine receptor interaction
tst04217  Necroptosis
tst04620  Toll-like receptor signaling pathway
tst04621  NOD-like receptor signaling pathway
tst04622  RIG-I-like receptor signaling pathway
tst04623  Cytosolic DNA-sensing pathway
tst05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tst00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117879265
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    117879265
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117879265
   04621 NOD-like receptor signaling pathway
    117879265
   04622 RIG-I-like receptor signaling pathway
    117879265
   04623 Cytosolic DNA-sensing pathway
    117879265
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117879265
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:tst04052]
    117879265
Cytokines and neuropeptides [BR:tst04052]
 Cytokines
  Interferons
   117879265
SSDB
Motif
Pfam: Interferon OrfB_IS605 DUF4164
Other DBs
NCBI-GeneID: 117879265
NCBI-ProteinID: XP_034630223
LinkDB
Position
6:98613801..98616020
AA seq 187 aa
MTTFCLLQISLVLLCTTKISTLDCNILPLLHNRVIQGNLHLLNKMGQQFPEQCQSEKIHL
KFPEQFLKLRQKENAKVEIQEILQLIFYIFTKNLTLAAWDGRSLERFQNGLNQQIEHLEA
CLTEKMEKKQPFSRSEEIIRLKLKKYFQKIDNFLKDKQYSLCSWEIIRLEMRRCLQFIDK
VIRRLRN
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaccactttttgtttgctgcaaattagtttggtgctgctgtgcaccaccaaaatctca
actctggattgtaatattcttcccctcctgcacaacagagtgatccagggcaatttacac
cttctgaacaaaatgggtcaacaatttcctgagcaatgtcaaagtgaaaaaattcactta
aagttccctgagcagtttctaaagctcagacagaaagagaatgccaaggtggaaatccag
gagatcctgcaactgatcttctatatctttaccaaaaacctaaccttagctgcctgggat
ggaagatctcttgaaagattccagaatggacttaatcagcaaattgagcatctggaggca
tgtttgacagagaagatggagaaaaaacaacccttctcaagaagtgaagaaatcattaga
ctgaaactgaaaaagtacttccaaaagatagataattttttaaaagacaaacaatacagc
ctgtgttcctgggagatcatccgcctggaaatgaggagatgtcttcagtttattgacaaa
gttataagaaggcttagaaactaa

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