KEGG   Trachemys scripta elegans (red-eared slider): 117879268
Entry
117879268         CDS       T07347                                 
Symbol
POLR1E
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117879268 (POLR1E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tst03021]
    117879268 (POLR1E)
Transcription machinery [BR:tst03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     117879268 (POLR1E)
SSDB
Motif
Pfam: RNA_pol_I_A49 DALR_1
Other DBs
NCBI-GeneID: 117879268
NCBI-ProteinID: XP_034630225
LinkDB
Position
6:complement(119436590..119465671)
AA seq 414 aa
MAAAARWCYRGDPEEAQSAPLVQFSNGKLQNSENMDFTLYKSKDATNPRKKHQRILTSET
DRLSYVGKNFGSGVLKCNSLCRYFVGVLDKDAGQMEVYNAELFNMQPLLSDDLIDDDPSD
YQNKSYREKVDSCIEAFGTNKQKRALNSRRMHQVGSETLNVAVTKAAENIIETKGVAALV
SDAAQDDLQDVSLFLPPCQEDADSPENVYRFEDLLSPAEYEALQTPAAAFVSITPEEILK
KTEEKSHCSFVLEELKSMPLSEDRADHKARCLWFLDALIKFSFQKVIKKKHAMGPDCPHV
INSKLMKNFTALTYNNGSIQNLISASMKAKITAYVIALALHINNFQTDLTVLQRDMKLRE
NRILEIAKAMRLKISKRKGPSGLTADEDHKLATLSLPLPVYKPAGSQRKRRKMK
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggccgctgccgcccgctggtgctaccggggggaccccgaggaggcccagagcgccccg
ctcgttcaattctcaaatggaaaactgcagaattctgaaaacatggattttactttatac
aaaagcaaagatgctactaatcccagaaagaaacaccaaagaatcttgacttcggagaca
gacaggctttcttatgtgggaaaaaacttcggctcaggtgtcctgaaatgtaactcccta
tgcaggtactttgtcggtgtgttagacaaggacgctggacaaatggaagtctataatgct
gaattattcaacatgcagccgttgttgtcagatgatttaatagatgacgacccatcagat
tatcagaataaatcctacagagagaaggtggattcgtgtattgaagccttcggcaccaac
aagcagaagcgagccctgaactctcgacggatgcaccaagttggcagtgagactttaaat
gtggctgtgacaaaagcggcagaaaacatcatagagacaaaaggtgtcgctgctttagtc
agtgacgccgctcaggatgatttgcaagatgtctccctcttcctacctccctgccaggaa
gatgctgacagcccagagaacgtctacaggtttgaggacctcctctcccctgccgaatat
gaagcgctgcagactccagctgcagctttcgttagcattactcctgaggagatccttaag
aagacagaagagaaaagccattgctccttcgttctagaagaactgaagtccatgccgcta
agtgaggacagagcggaccataaggcgcggtgtctgtggtttctggatgccctcatcaag
ttcagtttccagaaagtgattaagaagaaacatgcaatgggccccgactgtccacacgtc
attaacagcaaactcatgaaaaacttcacggccctgacatacaacaatggcagtatccag
aatttaatctctgcttcgatgaaggctaaaattacagcctacgtcatcgccttagccttg
cacattaacaacttccaaacagacctgactgtgctccagagggacatgaaactccgcgag
aacagaatactggagatcgctaaagccatgaggctgaagatctccaaaaggaaggggcct
tcaggactcacggccgatgaagaccacaagttggccaccctctctctgcccttacccgtg
tacaagccagccgggagccagcggaagcgcaggaagatgaaataa

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