Trachemys scripta elegans (red-eared slider): 117879272
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Entry
117879272 CDS
T07347
Symbol
SEMA4D
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tst04090
]
117879272 (SEMA4D)
CD molecules [BR:
tst04090
]
Proteins
117879272 (SEMA4D)
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GFIT
Motif
Pfam:
Sema
PSI
ig
Ig_3
I-set
Ig_5
Ig_2
Motif
Other DBs
NCBI-GeneID:
117879272
NCBI-ProteinID:
XP_034630226
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Position
6:80501804..80651336
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AA seq
857 aa
AA seq
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MALSGLYAALGLLFGAAAAFGPVPRITWEHREVQLVHFQEPEVFNYSTLLLSDDKDVLYV
GAREVIFALNSVNIAEKHHELYWKVTEDKKTKCADKGKSKQTECLNYVRVLQPLNDDVLF
VCGTNAFQPVCDHLNLMSFELRGKNEDGKGRCPFDPAQSYTSVMVDGELYSGTSYNFLGS
EPIISRNSHQSPLRTEYAIPWLNEPSFVFADVIRADQNSTEEDDDKVYFFFTEMSVEYEF
VGKLMIPRISRVCKRDQGGLRTLQKKWTSFLKARLICTTPDKNLIFNIINDVFILKSPSL
KEPVIYGVFTPQLNNMGLSAVCAYNLSTVEDVFSKGKYMQSATVEQSHTKWVRYNGEIPK
PRPGACIKKEAGAANYMSSLNLPDKTLQFVKDHPLMDDSVTPIGDRPRLIKRDVRYTQIV
VDRVTVLNGSVYDVMFISTDKGALHKAISYENGMHIIEEIQLFPNFEPVQTLLLSSKKGK
RYLYAGSNSGVVQSPVAFCDKYSTCVDCVLARDPYCAWKSHEASCINILKEDEIERDWIQ
NIGGDASSCPDKVRENSLQHTFKHGSTAELKCSQKSNLAQVVWKFKDDVLKVESPKYRLL
EKALLIFNLSEGDSGIYQCLSEEKVQNKTFSQVVAKHVLELKKIQPSTVGPIQPAAQTEG
NTDVPKMSTVPTEGSTAQTSTTQIIPITTGRIITKPIGPILASASSNPEIFNSVPDGVPE
KTIFLKSNDNFLLIFLFLFFFVLFLSLLSYNCYKGYLPDQCLKFRSAMLLGKKKPKSDFS
DCEQSVKETLVEQGSIQNQTGEQPKPAHDTGYETEPDCGNGQVQHDDVSSQAHKEVKDKP
FDVKCELKYADSDAEGD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggctctctctggtttgtatgcagctttgggtttattgtttggagcagcagcagcattt
ggtccagtaccaagaatcacttgggaacatagagaagtacaactggtccattttcaggag
ccagaagtgtttaactattcaactttattactaagtgatgacaaagacgttttgtatgta
ggagctagagaagtgatctttgcattaaattcagtgaatattgctgaaaaacatcatgag
ttatattggaaggtcactgaagacaaaaaaactaaatgtgcggacaagggcaaatccaaa
cagacagagtgccttaactatgtgcgtgtcttacaaccgctgaatgatgatgtcctcttt
gtgtgtggcacaaatgcatttcagccagtctgtgatcatctgaacttaatgtcatttgaa
ctccgaggtaaaaatgaagatggtaaaggtagatgtccatttgaccctgcccaaagctac
acatcagttatggttgatggagagctttattcaggaacttcctataacttcttgggaagt
gagcctattatttctagaaactctcatcagagcccgttgagaacagaatatgcaatacct
tggcttaatgagcccagttttgtttttgctgatgtgataagagcagatcaaaacagcact
gaagaagacgatgacaaagtgtacttctttttcaccgagatgtctgtggaatatgaattt
gttggaaagctgatgattccaagaataagtagagtgtgcaagagggaccaaggaggatta
aggactttgcagaaaaaatggacctcctttctcaaggccagattgatctgtaccacaccg
gataagaatttaattttcaacattatcaatgatgtttttattctgaagtctccaagtttg
aaggaaccagtgatttatggagtttttaccccacaactgaataatatggggctgtcagca
gtgtgtgcatacaacttgtctactgtggaagacgttttctccaaaggaaagtatatgcag
agtgccacagtagaacagtctcatacaaagtgggtccgatacaatggagagattcctaaa
cctcgacctggagcttgtataaagaaggaggcaggagcagcgaactacatgagttctcta
aatttaccggacaaaacactacagtttgttaaagatcaccctctaatggatgactcggtg
accccgataggggacagacccagattaataaaacgagatgtgaggtatacacagatcgtg
gtagacagagtcacagtgctcaatggcagtgtgtatgatgttatgtttattagtacagat
aaaggagccctgcacaaagctattagctatgaaaatggaatgcatattattgaagaaata
caacttttcccaaattttgagccagttcagacactgttgctttcatcaaaaaagggcaaa
aggtatctctatgcaggttccaattctggtgtggttcagtctcccgttgcattctgtgac
aagtacagcacttgcgttgactgtgttctagctagagatccctactgtgcttggaagtca
catgaagcctcctgtattaatattcttaaagaagatgaaattgaaagggattggattcag
aacataggtggtgatgcttcttcctgccctgataaagtaagagagaattctctgcagcat
acattcaagcatgggagcacagcagaactcaaatgttctcaaaaatccaacctggcccag
gtagtttggaaattcaaagatgatgtattgaaagttgagagccccaagtatcgtcttctg
gagaaagcactgctcatcttcaatttatcagaaggagatagtggcatttatcagtgtttg
tcagaagaaaaagtgcagaataagacattttctcaagtggtggctaaacatgttttggaa
ctgaaaaaaatccagcctagtacagtgggtccaatccaaccagcagcacagacagaaggt
aataccgatgtaccaaaaatgtcaactgtgccaacagaagggtctactgctcaaacttcg
accacccagattataccaataacaacaggaaggataataacaaagccaatcggccccatc
ctagcaagcgcatcctccaaccctgaaatcttcaattctgttcctgatggagtccctgaa
aagacaatattcttaaagtcaaatgataatttccttttaatatttctctttctgttcttt
tttgttctcttcctaagtctgttgtcctacaactgttacaaaggctatttaccagaccag
tgtttaaaattccgctctgctatgttacttggtaagaaaaaacccaaatcagatttttct
gattgtgagcaaagtgtaaaagaaactctagtggagcaaggcagtatccagaatcaaact
ggagagcagccaaagccagctcatgacactggatatgagactgaaccagattgtggaaat
ggccaggttcaacatgatgatgtctcctcgcaggctcacaaagaagtcaaggacaaacct
tttgatgttaagtgtgaactaaaatatgctgactcagatgcagagggtgactga
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