Trachemys scripta elegans (red-eared slider): 117879298
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Entry
117879298 CDS
T07347
Symbol
ELP1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117879298 (ELP1)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
117879298 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
TPR_IF140-IFT172
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Herpes_UL37_2
Motif
Other DBs
NCBI-GeneID:
117879298
NCBI-ProteinID:
XP_034630275
LinkDB
All DBs
Position
6:128470678..128584313
Genome browser
AA seq
1327 aa
AA seq
DB search
MRNLKLLHTREHGPVQVLGSPQCFCLRADQGTLLIGSEYGILELDPAIRGVTNDISLTVG
GFLPEDGSGHIVGIEDLPDQECVCVATAAGDVLLCNLSAKQLECVGSVDSGLTTMSWSPD
QELVLLVTGQQTLIMMTKDFEPITEREIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAH
RKQMEVPPASSSDDGRPRVTWRGDGQFVAVSAICPQTGARKVRVWSRELVLQSTSEPIPG
LEQALAWKPSGSLIASTQEKPNKHDVVFFEKNGLLHGEFTLPFQKGQAKVNELLWNLDST
ILAVWLEDLKKEKNSETNTYVQLWTVGNYHWYLKQSLHFGSAEKSRLVSLLWDPEIPYRL
HALCRGWHALCYDWHWSTDCSTGDESHLVANVAVIDGDKVLVTAFQHSVVPPPMCTFQLQ
LQQAVNQVAFHTDPTKSADLAVLDASNRISVYRVGGGTVKDPTVTLGGSGFKASVETPHL
EKTYRVEVCCGEGKQVNPLAFRLFTWLQDDTFLAVSQGQLATHSVIHHLTGGPEAEGGCL
HLRLSMPVDGDVISLCCNPKTRAIALQLADGQILKYLWEAPTPALEPWRSSTGSAVRFPS
PCVQTALAMIGGEEAILGLTDRCRFFINDVEVASNVTSFARYDEFLLVTTHSHTCQCVSL
RDTSLKVLQAGFSSFSTPNETLRKVERGSRIVTVVPQDTKLILQMPRGNLETVHHRALVL
AQIRKWLDRLMFKEAFECMRKLRINLNLLYDHNPKVFLENVETFIKQIDSVNYINLFFTE
LKEEDFTKTMYPSPVSSNVQLQQCSDQKKVDLICDAMRAAMENINPQKYCLSILTSHVKK
STPELEIALQKVHELRETVSPAAEGVTAEAALKYLLFLVDVNELYDHSLGTYDFDLVVMV
AEKSQKDPKEYLPFLNTLQKMETNYQHYTIDKYLKRYKKALCHLSKCGTEHFSEFLNLVK
DQNLYNEALKLYPPDTPEHKAVGSAFGEHLNQKHLYEQAGLIFARCGAFERALDAFLSSG
SWQQALCMASRLGYTVDQLASLARSLAGKLIEQRKHAEAAILLEQYAQDYEEAVLLLLEG
TVWEEALRLIHKYSRLDILETNFKPAILEAQRNYLVFLDSQKTTFTRHRKRLLVVRELKE
QARQGLLDNETPNCLEADFISETSSIVTASDMSGKYSHSNSRISARSSKNRRKAERKRHS
LKEGSPLEDLALLEALGENIRTTENMKGEVHSLLKGLVLFGYDELARELQQALEEALQLI
ERSLPEIWTRDLQQNPANPVLGPNSTANSIMAAYQQQRIAAPAVQDAELLIPPKLNKNIQ
WKLNLLQ
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttgaagttactgcacactcgagagcatgggcctgtccaggttttggggagt
cctcagtgtttctgcctccgtgcagaccaagggacactgctcattggctcagaatatggg
atcctggagctcgacccagccattcgaggggtgacgaatgacatttccttgactgtgggt
ggttttctgccagaagatggaagtggccacattgtgggcattgaagatctgccagatcag
gagtgtgtgtgtgttgctacggcagctggagatgttctactgtgcaacctcagcgcaaag
cagctcgaatgtgttgggagtgtggacagtggtctgaccaccatgagctggagtcctgac
caggaacttgtcctgctggttacaggtcagcaaactcttataatgatgacaaaggacttt
gaaccaattactgaaagggagatccatcaggatgactttggggaaggaaagttcatcact
gttggttggggtaaaaaggagacacagttccatggatcagagggcaaacaggcagctcat
cgcaagcaaatggaagtgccacctgcttcatcctctgatgatggccgaccccgagtcacc
tggagaggagatgggcagtttgtagcagtgagcgctatttgtccacagacaggggcccgg
aaggtcagagtatggagcagagagctggtcttacagtcgacaagtgagcctatcccagga
ctagaacaagcactggcctggaagccctctggaagcttgatagcctccacacaggagaag
cccaacaaacatgatgttgtcttctttgagaaaaatggtctccttcatggggaattcacc
ctcccgtttcagaaaggccaagccaaggttaacgagctgctttggaacttagactctacg
atcctggcagtttggttggaagatcttaagaaagaaaagaactccgagacaaacacctat
gttcagctctggacagtagggaactatcactggtatctgaagcagagcctgcattttggc
agcgctgagaaaagccggcttgtgtcactgctatgggaccctgagatcccatatcgactg
cacgctctctgcagaggatggcacgccctctgctatgactggcactggagcaccgactgc
agcactggggacgagagccaccttgtggccaacgtggccgttatcgatggagataaggtg
ctggtaacggccttccagcattctgtggtgcctccgcccatgtgtaccttccagctccag
ctccagcaggcggtgaaccaggtcgcattccacacagaccccacaaagagtgcagacctt
gctgtcctcgatgccagcaacaggatctccgtttacagagttggtggcggcacagtgaaa
gaccccactgttacattgggaggaagtggatttaaagcttctgtggaaacacctcatctg
gaaaaaacctacagagtcgaggtgtgctgcggcgagggcaagcaggtgaatcctctggcg
ttccggcttttcacctggctgcaggatgacaccttcttggcagtcagccaggggcagctt
gccacgcactctgtcatccaccatctgactggaggtcctgaggcagagggagggtgccta
catctccgtttgtctatgcctgtggatggggatgtgatcagcctgtgctgtaatccgaag
accagagcaatagctctgcagctggctgatgggcagatactgaagtacctctgggaggct
cccactccagccctcgaaccttggaggagcagcactggctctgctgttcggttcccttct
ccttgtgtgcagactgcgctggccatgattggtggagaagaagccatcctgggtctgact
gatagatgccgttttttcataaatgatgtggaggtggcttccaacgttacctcatttgcc
agatatgatgagtttctgctggtgaccacccactcccacacctgccagtgtgtatctttg
agggacacatcgttgaaagttctgcaggcaggcttcagcagcttctctactcccaacgag
acactacgcaaggtggagcggggctcccgcatcgtcaccgttgtaccccaggacaccaag
ctcatcctgcagatgccaagaggaaacttggagactgttcaccaccgagccctcgttctg
gcccagattcggaagtggctggacaggctcatgtttaaagaagcatttgaatgtatgagg
aagctgagaatcaacctcaaccttctttatgatcacaatcccaaggtttttctggaaaat
gtggaaaccttcataaaacaaatagattctgtgaattacatcaacttatttttcaccgag
ttgaaagaagaagacttcacaaagactatgtacccatctccagttagcagcaatgtccag
ctacaacagtgttctgatcagaaaaaagtagaccttatctgtgatgcaatgagagctgcc
atggaaaacatcaatccacaaaaatactgtctttcaatactgacatcccatgtgaagaaa
agcaccccagaactggaaattgcccttcaaaaagtgcacgagctgcgagagactgtttca
ccagcagctgagggggtgactgcagaagcagcgttgaagtatctactcttcctggttgac
gtcaatgaactgtacgatcactccctgggcacatacgactttgatttggttgtcatggtg
gcagagaagtctcagaaggaccctaaggagtacctaccattcttaaacaccctccagaaa
atggaaaccaactatcaacactacactatagacaaatacctgaaaagatacaagaaggca
ctctgccacctcagcaaatgtggtacagagcacttctctgaatttctgaacttggtgaag
gatcagaatttgtataacgaagccctgaagttgtatccccctgatactccagaacacaag
gctgtcggcagtgcctttggcgagcacttgaaccagaagcatctgtatgagcaggctgga
ctgatctttgcccgctgcggtgcatttgagagagccctcgatgcctttctgagcagtggt
agctggcagcaggccctctgcatggcctctcggcttggttacacggtggatcagctggct
agtcttgcaaggagcctggcaggaaaactaattgaacagagaaaacatgctgaggcagcc
atactcctggagcaatatgcacaggactacgaagaggctgtgctcctgctcttggaaggg
accgtctgggaagaagccttaagactaattcacaagtacagcagactagacattctggag
accaacttcaaacctgctatcctagaagctcagagaaattatttggtgtttctggattct
cagaaaacaacgttcactcgccacagaaagcgcctcctggtggttcgagagctgaaggag
caagcccgccaagggctactggacaatgagacacccaactgtctggaggcagactttatt
tccgaaaccagcagcatcgtgacagccagtgacatgagtggcaaatactcgcacagtaac
tcgaggatatctgcccgatcctccaagaaccgtcgcaaggcagagcgcaagcggcacagt
ctgaaggaagggagccctctggaggacctggcccttctagaggccttgggagaaaatatc
cgcactactgagaacatgaagggtgaagtgcacagcttattaaaggggcttgtgctcttt
ggctacgatgaactggccagggagctgcagcaggccctggaagaggctttgcagttgata
gagaggtcactcccggaaatctggaccagagacctgcaacagaatcctgctaacccagtc
ctgggccccaattcaactgcaaatagcattatggccgcctatcaacagcaaagaattgca
gctcctgcagtacaagatgcagaacttcttattcctccaaaactcaataaaaacatccag
tggaaactgaatctcttacagtaa
DBGET
integrated database retrieval system
