Trachemys scripta elegans (red-eared slider): 117879299
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Entry
117879299 CDS
T07347
Symbol
TBC1D2
Name
(RefSeq) TBC1 domain family member 2A isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117879299 (TBC1D2)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117879299 (TBC1D2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_8
BsuBI_PstI_RE
Rpn13_ADRM1_Pru
Motif
Other DBs
NCBI-GeneID:
117879299
NCBI-ProteinID:
XP_034630279
LinkDB
All DBs
Position
6:complement(128427221..128469959)
Genome browser
AA seq
950 aa
AA seq
DB search
MERRPESGECLLAGIPGKPVESDSDDNSGNAGSAKERAVSSPQRDLGNTQLNPSREGPRK
KLCGYLNKLGVKGPIKAWKSRWFFYDENKCHLLYCRTAQDVNPLGSIDLSSAGFDCKVDA
DEGVFEIRTPSRVFILKAFSRQAMMYWLQQLQMKRWAFCNTQTGLPVDSVTAAALPANES
LLNETIHTEGEGFLPPVKTPTDVVGLKAAFLPAPQLSDALQNISLKHPWTEIQNTIYNIC
GTRQHPGNGRSISGVEGFPAHPGTPVEEQEVEGEAECPVREQAREDTRAGPRLHWPRKAK
WLTSGFPAFPEGLARERSSPDKVAVLQQQVLTLTEEIKSQKELVKLLHKALEAAQQEKRA
SSMYLTAAEDRDRLELVRHKVRQIVELSSRVEALETDKQELEQSVALRDRRVEELQEHVQ
LLMDKNQAKQQVILKLTEQIAQDLSEPVQEADAVAADTLYKQQEEIEHLKHLPSITHYYR
AEDDLDAYRTQNQFLNSEIHQVTKLWRSVAEKEKVLLMKCARLQARSCQVESKYLMMLRR
LQEASPDLARGEAELVKSLIQEALQWDAKEEAAEALQLNPVREYDDYGFMTIPKNEAEDW
KLLAKIQALEIKSNNLLSHTAVEKPLGERWAGMAELSPSAELKGLIRCGIPVEHRQRVWK
WIVTQHLSHHHAANHYESLLRQCERTEHPASRQIELDLPRTLTNNRHFTSPTSQLIPKLR
RVLLAFSWQNPAIGYCQGLNRLAAIALLVLEEEESAFWCLVHIVENLMPADYYSNTLIAS
QVDQRVFKDFLSEKLPRLTAHFEQHRIDVSLITFNWFLVAFVDSLVSDILLRVWDAFLYE
GTKVIFRYALAIFKYNEEEILQIHDSLEVYQYLRFFTHMIGDGRKLMSIAFNDMNPFPMK
VLRNRRATHREELEAELSELERIKAQYVKEQAEQVAWHLDGAVSEEEEEM
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggagacctgaaagtggagagtgtctcctggctggaattccaggcaagccagtt
gagtcagattccgatgataacagcggtaatgcaggctcagcgaaagagagagctgtatcg
tcgcctcagagggacttgggaaacacacagctcaatcctagcagagaaggacccagaaaa
aaactctgtggctatttaaataaacttggggtcaaggggccaatcaaggcctggaagtct
cgttggttcttttatgatgaaaataaatgtcacttactgtactgcaggacagctcaagat
gttaaccctttggggagcattgatctctccagcgctggttttgattgcaaggtggacgca
gatgaaggggtttttgaaatcagaactccaagcagagtgtttatccttaaggcattcagc
cgacaggccatgatgtactggctgcagcagctgcagatgaagcgttgggcgttttgcaat
acccagactgggcttcctgtggacagcgtcactgcggcagccctgcctgcgaatgaatct
ctgctcaatgaaaccattcacactgaaggcgaggggttcttgccccctgtgaaaacccct
acagatgtggtaggtttaaaggcagcctttctgcccgctccccagctgtctgatgccctc
cagaacatctccctcaaacacccttggactgaaatacaaaatacaatctacaatatctgt
ggcaccaggcagcacccgggcaatggcaggagcatctccggtgttgagggattcccggcg
caccctgggactccggtggaagaacaagaggtggaaggggaggcagaatgtccagtcagg
gagcaggcccgagaggacacacgggctgggcccaggttacactggcctaggaaagcgaag
tggctgaccagcggtttccctgccttccctgaagggttggcacgtgagagaagctcccct
gacaaggtggctgttctgcagcagcaggtcctgacgctgacagaggaaatcaagtctcag
aaggagctggttaagcttctccacaaggctctggaggctgcgcagcaggagaagagagca
tccagcatgtacctgactgctgcagaagacagagaccggctggagctggtgcggcacaaa
gtgaggcaaattgtggagctcagcagtcgggtggaagccctggagaccgacaagcaggag
ctggagcagagcgtggctctgagggacaggcgtgtggaggagctgcaggagcacgtgcaa
ctcctgatggacaagaaccaggccaagcagcaagtcatcctgaagctcacggagcagatt
gcccaggatctctctgagccggtgcaagaggctgatgctgttgccgcggataccttgtac
aagcagcaggaggagattgagcatttgaagcatctcccaagcattacgcactattacagg
gcagaggatgacctagatgcctacagaactcagaaccagttcctcaactcagagatccac
caggtcacgaagctctggagaagtgttgccgagaaggagaaagtcctgctgatgaagtgt
gcccgcctgcaagcccgcagctgccaggtggagagcaaatacctgatgatgctgcggagg
ctgcaggaggcctcccctgacctggccagaggtgaggctgagctggtgaagagcctgatc
caggaggcgctacagtgggatgcgaaggaggaagcagcggaggctcttcagctgaaccct
gtcagagagtatgacgactacgggtttatgaccattcccaaaaacgaggctgaggactgg
aagcttctggctaaaatccaagccctagagatcaaatccaacaacctgctgagccacacg
gcggtagagaagcctcttggtgagagatgggccggcatggctgagttgagcccctctgca
gagctgaaaggcttgatccgctgcggcatccccgtggagcaccgccaaagggtctggaaa
tggatagtgacccagcacctgtcccatcaccacgccgccaaccactacgagagcctgctg
cggcagtgtgagcgcacggagcaccctgcctcccggcagatcgagctggacctgccccgc
accctgaccaacaacaggcatttcacatctcccacctcccagctcatccccaagctccga
agggtgctgctggccttctcctggcagaatcccgccattggctactgccaggggctaaac
aggttggcagccattgccctcctggtcctagaagaggaggaaagcgcattctggtgcctg
gttcacattgtggaaaatctgatgccggcggattactatagcaacacattaatagcatca
caggtggatcaaagagtctttaaagacttcttgtcagaaaagctccccaggcttacagct
cactttgagcagcacaggattgacgtttcactgatcaccttcaactggttcctggtggcc
tttgtagacagcctggtcagcgacatcctcctccgggtctgggatgccttcctgtacgaa
ggaacaaaggtgattttccgctatgctcttgccatctttaagtataacgaagaggagatt
ctgcagatccatgacagcctggaggtttaccagtaccttcgctttttcacccacatgatt
ggagatggcaggaagctgatgagcatcgccttcaatgacatgaatcccttcccaatgaaa
gtgctgcggaaccggcgagcaactcaccgggaggagctggaggcggagctgagcgagctg
gagcggatcaaagcgcagtacgtgaaagagcaagcagagcaggtggcctggcacctggac
ggagccgttagcgaagaggaggaggagatgtag
DBGET
integrated database retrieval system
