Trachemys scripta elegans (red-eared slider): 117879324
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Entry
117879324 CDS
T07347
Symbol
NOL6
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117879324 (NOL6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117879324 (NOL6)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117879324 (NOL6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
117879324
NCBI-ProteinID:
XP_034630315
LinkDB
All DBs
Position
6:3366745..3433569
Genome browser
AA seq
1150 aa
AA seq
DB search
MKMKPRAAAGGGDRAFDDAEGDLEAKEENQDLPKKGKPQGRKRASVPDGVVKPVKLSRAD
LYKPPTNEELNQLKETENLFHSSLLRLQIEELLKEVKLKEKKKQKIDAFLHEINTLLSAV
PETPETDLADQSWLPKDVKVPFLQVPVSVKGKFRFLPPAAVTVVGSYLLGTCIKPEINVD
VAVTMPRAILQDKDNLNQRYHRKRALYLAHIAQHLSKEKLFGNVRFTYMNSNHLKPILLL
KPQGKDEKLVTVRLYVCPASGFFKPIRLYPSKNNVRTAWFLEQGSPGEGAAEPPTPHYNN
SILCDMGLESNLLFLAGAGADFPGMRDGVALLKVWLHQRELDKGLGCLNGFMASMLVAYL
LAKHKISQGMSGYQVLRSVLQFLATTDLSAAGISLLKDTDSSLPTLADFHQAFEVVFVDP
SGLVNLCADMTASKYKQVQFEAKRSMEVLDDRTVDGFQLLLMTPKPLIRTFDHVFHLKHV
SKLQGACKKMQLLNELMDRGGNYIAAALPFVTSLLARGLAERVLLLTHSLPQAPQWPISA
EPPKHKDAGHLSFGLLLTPEFAASILEKGPEADRPEAAEFRKFWGEKSELRRFQDGAICE
AVVWGAETMCQKRLIPEQIVKHLLWLHADIPESSICYSGAVLESVIRAGREPAGTGEEAM
VSIVRSYDDLSRKLWNLEGLPLTVTAVQGTHPALRYTDVFPPTPMKPDYSYHMRIKDKES
LLPLAQKPCPAYIAPMKVVCHMEGSGQWPQDKEAIKRVKAAFHLRLAELLNQQHQLLCRP
AATHTDVYKDGYVFRLQVAYHREPQILKEVVTPEGMLKYRDTEESQQLELETLHLPYLTS
SLHGLQQQHPAFSGTSRLAKRWVRAQLLSDSLSDECVDLLAASLFLHPAPFTPPSSPQVG
FLRFLHLLTAFDWKNSPLIVNLNADLKDADYTEIRNEFVAARPHLPVMFIATPRDKRSSV
WTKERPSAQILQRLLVLALESLRALEEQLTDPLGSQDVKMVFRPPLDFYDILIHLNAKQL
PRHLEGVDRPAKSFSRGMLKSDAPVKTLAFPVVGYDPVQCYLQELREAFGDLALFFYDSH
GGEVIGVLWKPSSFEPQPFKASNMKGRMMASLSCEELVTVPNVEAILEDFEILGEGLVRS
VEARTEKWTI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagccgagagcggctgcgggcggcggggaccgggcatttgacgatgcagag
ggagacctggaggcaaaggaggagaatcaggatctccccaagaaaggcaaaccccaggga
aggaaaagggcttcagtcccagatggcgttgtgaaaccggtgaaactcagccgggctgat
ttgtacaagccgcccaccaatgaggagctgaaccaactgaaggagaccgagaatctcttc
cattccagccttctccgcctgcagatcgaggagctgctgaaggaggtgaagctaaaggag
aagaagaagcagaagattgatgccttcctccacgaaatcaataccctgttgagtgctgtc
ccagagaccccggaaaccgatctcgccgaccagtcctggctcccgaaggacgtgaaggtt
ccgttcctccaggtgcctgtcagcgtgaaggggaagttccgcttcctgccgccagccgcg
gtgacggtggtggggagctacctgctgggcacatgcatcaagccggagatcaacgtggac
gtggcagtgacgatgccccgggcaatcctccaggacaaagacaacctgaaccagcgatac
caccggaagagagctctgtacctggcccatattgctcagcacctctccaaggaaaagctg
tttggcaacgtgagattcacgtacatgaacagcaaccatctcaagccgatcctgctcctg
aagcctcaaggtaaagatgagaagctggtgacagtccggctctacgtctgtcccgcctcc
ggtttctttaagcccatccgcttgtaccccagcaagaacaacgtccggacggcctggttc
ctggagcagggctcccccggagaaggagccgccgagccccccactcctcactacaacaac
tccatcctctgcgacatggggctggaatccaacctgctcttccttgccggcgctggcgcc
gacttccccggcatgagggacggagtcgccctcctcaaagtctggctgcaccagcgggag
ctcgacaagggcttggggtgtctcaacggcttcatggcctccatgctggttgcctacctg
ctggccaagcacaagatcagccaggggatgagcggctaccaggtgctgaggagcgttctg
cagttcctggctaccacagacctgagtgcagctgggatcagcctgttgaaggacacagat
agctcactgcccaccctggccgacttccaccaggcgttcgaagtggtctttgtggacccc
tcggggttggtgaacctctgcgctgacatgaccgccagcaagtacaagcaggtccagttc
gaagccaagcgctcgatggaagttctggacgacagaacagtggacggattccagctgctg
ctcatgacccccaagcccctgatcagaaccttcgaccatgtcttccacctgaagcacgtc
tccaagctgcagggagcctgcaagaagatgcagctgttgaatgagctgatggatcgaggc
gggaactatatagctgcagccctgcccttcgtcacctccctgctggcgcgagggctggcc
gagagggtgctgctgctgacgcactccctgccccaggcaccgcagtggcctatcagcgca
gagcccccgaagcacaaggacgccggacacctgtcgttcgggctcttgctcacccctgag
tttgccgctagcattttggagaagggaccagaggcagatcgaccggaggcggccgagttc
cggaagttctggggggagaagtccgagctgaggcggttccaggacggcgctatctgcgag
gccgtggtgtggggcgcagaaaccatgtgccagaagcgcctcatcccggagcagattgtc
aagcacctgctgtggctccatgcagatattcctgaatcctccatctgctactcaggagcc
gtgctggagtctgtgatcagagctgggcgagagcccgcagggactggggaggaggccatg
gtcagcatcgtccgctcctacgacgacttgagccgcaagctctggaacctggaggggctg
ccgctgacggtgacggccgtgcaggggacccacccggccctcagatacacggacgtcttc
cctccaacccccatgaaaccggattattcgtaccacatgaggatcaaggataaggagtcg
ctgcttccattggctcagaagccctgcccggcgtatatagccccaatgaaagttgtgtgc
cacatggaagggagtggccagtggccgcaggacaaagaagccatcaaacgcgtcaaagcc
gctttccacctccgcctggccgagctcctcaaccagcagcaccaactcctctgccggcct
gcagccactcacacagacgtgtacaaggatggctacgttttccgcctccaagtggcctac
cacagggagccccagatcctgaaggaggtggtcactccagaggggatgctgaagtaccgg
gacacagaggagtctcagcagctggaactggagacgctccacctgccctacctgaccagc
tctctgcacgggctccagcagcaacaccccgccttcagtggcacctcgcggctagccaag
cgctgggtccgcgcccagctgctgagtgacagcctctcggatgagtgcgtggatctgctg
gcggcgtctctgttcctgcacccagcacctttcaccccgccgagctcccctcaggtgggc
ttccttcgcttccttcacctgctcacggccttcgactggaagaacagccccctcattgtt
aacctgaacgccgacctcaaagatgcggattacaccgagatcaggaacgagtttgtggct
gcccggcctcacctccccgtcatgttcatcgccacccccagagacaagcggagctcagtg
tggaccaaagagcggccttctgcgcagatcctgcagcgccttctcgtgctggcgctggaa
tcgcttcgggcgttggaggagcagctcacggacccgcttgggagccaggatgtgaagatg
gtcttccgcccaccgctggatttctatgacatccttatccacctgaatgccaagcagctc
cccaggcacctggagggcgtggaccgaccggcgaagtctttcagccggggaatgctgaag
agcgatgctccggtcaagaccctcgctttcccagtggtgggttatgatccagtacagtgc
tacctccaggagctgagggaggcctttggagacctggccttgttcttctatgactcgcac
ggcggggaggtgattggagttttgtggaaaccttccagtttcgagccccagcctttcaag
gcatccaacatgaaaggaagaatgatggcatctctaagctgtgaggagctagtcaccgtt
cccaatgtggaagccatcctagaagactttgagatcctgggagaaggtctggtcagatca
gtggaggcacgtacagagaaatggactatctaa
DBGET
integrated database retrieval system
