Trachemys scripta elegans (red-eared slider): 117879326
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Entry
117879326 CDS
T07347
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117879326 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117879326 (DMXL1)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117879326 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117879326 (DMXL1)
RAVE complex
117879326 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_2nd
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_HPS5
CFAP251_N
Beta-prop_VPS8
MIOS_WD40
Beta-prop_Vps41
ASA1
Motif
Other DBs
NCBI-GeneID:
117879326
NCBI-ProteinID:
XP_034630316
LinkDB
All DBs
Position
6:70939864..71091890
Genome browser
AA seq
3089 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSLHDQPLTAYASGCDIVILGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNMICIFEPVTVLKQKSNHPAGVYYQWQKCGQILLDSIAHNITW
DPTGTRLLTGSSCLRLWSNVNLENQSEDGNPERTDVSFGDWRCIWQCKTASQVYLMKFSP
DGEFFATAGKDDCLVKVWYNTDSWRSAVTPQSSSPQKQAQDVDFSFVYLAHPRSVNGFSW
RKTSKYMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLSCAGGYNHWTEPVNLTNNFKRN
ASSKERMQNALELNLRPFRRGRRRSLALIAHTGFSPHQQDPHEVHRNTPLHANALCHFHI
AASINPATDIPLLPSITSLSLSENEEKSGPFVVHWLNNKELHFTLSMEVFLQHLKKSFEQ
HSSETSTEESNQLDGKSDEEADDSGEEQKGNQEKKELGSEKTVPNSGFVPLSSAIIDHEI
EILLSEWSKNADMLFSIHSMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPLGLTRSSSMLISSAHNKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALRSPDVDGTKQTNDISNSGDSPLRSQNRGTTSVTSQDPNAVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYQAIIDA
KKLLCELSNPEISKYVGEVFNIISQQSTARPGCIVELDAITELHGRKTQLLHVFQEDFIL
NNDDEKIPEKNNCLADSGNLQNGFSEKFYLIVIECTQNRSLLHMWNLHLKSVPVSVDEKI
DSNIAEAVSHHEELYSSSPDPEKIQSPFTQKYRACRANLQSTSRLTLSSEMVYSQELNLP
EGVEIISVKPSAGHLSSSSVYPVCHAPYLLATSCSDGKVRFWRCRVTPEAVVSSTPEYTI
NSNVTYIWEEWPLLVEDGLLSSSTVNVPGRPIEVSCAHTNRLAVAYKQMTSKNSRCSQDF
MMHVSIFECESTGGSCWILEQTLHLDEISIMLDSAISIDSNLMAYNKQEVYLSNNERILP
STKHLVHLDWMSKEDGSHILTVGIGSKLYMFGQLVGNMHDQSSKEMSALPLWENAKVTSL
CRFVLLRCVDLVSSVEGSPPLPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQESVTSDS
YSGSTPSITSLMKQSQSAGSGLHPPKRTLTRSMTSLAQKLSGKRTAFDLSVEMEDSGLFE
AAHALCPTLPQYHPFQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESEPNHDRRLRS
LTISASGSTARDPKTFNKTENTDYTEIDSVPPLPLYALLAADDDCSHFCLEKSNNQNNLN
KQNGLPDENYEDLFQNSSLNTDDLTVFEADEDNTKPKVIDLSQYSPTYFGPEHAQVLSRH
LMHSSLPGLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVQLHTF
LTTSLPPVHRAQLLHQGLSTRHFAWAFHSVAEEELLNMLPAVQKGDPTWSELRAMGVGWW
VRNTHSLRRCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKETKMTQFFGNN
FTEDRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLGDIQLALVISRLY
ESEFEVSSMYKSILQKRILGSAFPGKESSSNMHCDPFLRSMAFWILEDYSRALDTLIKQP
AGNEEDENGASPSCDPSVFNFYNYLRTHPLLLRRHFGSSETSSTRICLTVENGLADKINL
SERRLFFTTAHAHLKAGCPMLALEVLSKMPKVVKKSKPFCTNSSLMDTSKDFSPSSPIRL
ETKEDKASIVDWAQPVLNGLGSSSDCSSDKQSSSALSFDWSQPSLVFQDEPLELKWESDK
DEESEDSSLVMKELKPLQKMTSEKLDETSSNYSESFSAGDENYLLSPSEDVISAQLKFRA
CLKILTVELRTLSTGYEVDGGKLRYQLYHWLEREVVALQKTCDYSAEIEEVQPGISVTVD
EIALSENPEELSDQSKAMLQRENFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRM
ELILLLQESQQEQSIQTLPSPLPEQNSIPLLFACTASAKTVVASPLLHLSNLTHDILHAV
INLDSPPHPDIQNNKIHVMHTLAASLSACIYQCLCGGHSYSSLQANQFTGTVYQTLLLTQ
RHTLRTTSLDETVTPNTSPAQWPGITALIRRLNSAGEEAQPGLTVLLCEILTAVYLSLFI
HGLATHSSSELYRIMAHPFNDKMWSAVFGGGAHIPSRGQMQQTTKAGRHFSMPSPHQVVV
FSMECVGFSKSLAAISTHSPTKHAVSSSVDNGKKQQKSFTLSSKISPKEISQSPSSSLVE
QESPSYREKFIPPELSIWDYFIAKPFLPTSQSRVEYDSEESQGSDDEDDDFTSDLHLQEH
SNSNSYSWSLMRLAMVQLVLHRLKNFYPLAGHDLSELPVSSPLCHAILKTFQRWEQVLLR
RLEIHGGPPQNLISAHTSEDALSAGPALLRHKALLEPTNTPFKSNSHVALSVKRLWQYLV
KQEEVQETFIRNIFTKKRCLNESLEDHSETIKNTMMEEPIFNKIEADLGYPGGKARIIHK
ESDIITAFAVNKANRNCIAIASSHDIQELDVSGILATQIYTWVDDDTEVEAKGSDDFLVI
HARDDLANVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVLIKKAINNVRRMASHPTLPY
YLTGAQDGSVRMFEWGHSQQITCFRSGGNSRITRMRFNHQGNKFGIVDADGYICLYQTNW
KCCPLTGSTPKPYLTWQCHNKTANDFVFISSSSLIATAGQATDNRNICLWDTLVAPANSL
VHAFICHDSGATVLAYAPKHQLLISGGRKGFTCILDLRQKQQRQLFQSHDSPVKAIAVDP
AEEYFVTGSAEGNIKIWSLSTFNLLHTFINEHARQSIFRNIGTGVMQIETGPANHIFSCG
ADGTVKMRILPDQFSPVNEVLKNEVKFML
NT seq
9270 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgacgggcgccgtgaaccccggggacaactgcttctccgtg
gggagcctccacgaccagccgctcacggcttatgcatcaggatgtgatatcgttatattg
gggactgattttgaaagattacaaataatccctggagcaaaacatgggaatattcaagtg
ggatgtgtggactgctcaatgcagcaagggaagattgcagcgtcttatggaaacatgatt
tgtatttttgaaccagttactgtcctgaaacagaagagcaatcatcctgctggggtgtat
taccagtggcagaagtgtggtcaaattttactggactctatagcacataatataacatgg
gatcccacaggcactcgtctcttgactggttccagctgtctgcggctttggtccaatgtt
aatttggaaaatcaatctgaagatggcaatcctgaaagaacagatgttagctttggggac
tggaggtgtatatggcaatgcaaaactgcttcccaagtttatctaatgaaattttcacca
gatggggaattctttgctactgcaggaaaggacgactgtcttgtaaaagtgtggtataat
accgatagttggcgatcagcagtaacacctcaaagttcaagtccacaaaaacaagcacaa
gatgttgatttttcatttgtttacttggcccatcctcgatctgtaaatggattttcatgg
aggaagacaagcaaatacatgccacgtggtgctgtatgcaatgtactgctgacttgctgc
aaggataatgtatgccgtctctgggcagagactttgttacccaatgatagtttatcatgc
gctggtggatacaaccattggactgaaccagtgaacttaaccaataacttcaaaagaaat
gcttctagtaaggaacgaatgcaaaatgctttagagttaaatctaaggccctttcgacga
ggaaggagaaggtcacttgccctcatagcacatactggattttccccacatcagcaagat
cctcatgaagttcataggaacactcctttgcatgcaaatgcactctgtcactttcatatt
gctgccagcatcaacccagccacagacattcctctactcccttctatcacgtctctgagt
ctcagtgagaatgaagagaaaagtgggccatttgtagtgcactggctgaacaataaagaa
ctgcattttaccctctccatggaagtatttttgcagcatcttaaaaagagctttgagcag
cattcttcagagaccagcactgaagagtcaaatcagttggatggcaaatcagatgaagaa
gctgatgatagtggagaagagcaaaaaggaaatcaagagaagaaagaactgggtagtgag
aaaactgttccaaattctggctttgttcctttatcttctgctattattgatcatgagatt
gaaatactattgtctgagtggagcaaaaatgcggacatgctattcagtattcattccatg
gatggttcattgctggtatggcatgtggactggctagatgaatatcagcctggtatgttt
cgccaggtgcaggtgtcttttgtttcaagaattccagtagcatttccaacaggtgatgca
aattctctttgcagaagtatagtgatgtatgcctgcaccaagaatgttgacctcgctatt
caacaaggcaaacagaagccccttggccttacacgttcctcatctatgcttatctcttct
gcccacaataaatcaactaacagtttaaaattaagtatcttcaccccaaatgttatgatg
atttcaaaacatgcagatgggtctttaaaccagtggctagttagttttgcagaggaatct
gctttttctactgtgctcagtatttcacataaatctcgatattgtggtcaccgttttcat
cttaatgacttggcttgtcattcagtgttacctttgctgctgacaacttctcatcataat
gctttaagatcaccagatgttgacggcacaaaacagacaaatgatatttcaaattctgga
gattcgcctttaagatctcagaatagaggcactacaagtgtaacgtcccaggatcccaat
gcagtttatagtgagcttattctttggcgagttgatccagttggtccattatccttttct
ggaggtgtttctgaacttgcacgaattaattctctccatgtttcagctttttctaatgtg
gcatggctgcctacacttatacccagttactgtcttggtgcatactgcaattctccaagt
gcttgctttgtggcaagtgatggacagtatctgagattatatcaggctataatagatgct
aaaaagcttttgtgtgagctatccaatcctgaaatttctaaatatgtgggtgaagttttt
aacatcataagtcaacagtctactgcaaggccagggtgcattgtagagttggatgctatt
acagagcttcatggcagaaaaacacagttacttcatgtttttcaagaagacttcattttg
aataacgatgatgagaaaatacctgaaaagaacaactgtttagcagactctggaaacctg
caaaatggattctctgaaaaattttacttaatagtaattgaatgtactcaaaaccgctca
ttattacacatgtggaacttacacttgaagtctgttccagtttcagtggatgaaaaaata
gactcaaatatagctgaagcagtgtcacatcatgaagagctatattcttcctctccggat
ccagagaagatccaatctcccttcacgcagaaatatcgggcctgtagagcaaaccttcaa
agtaccagtcgtctgactctctcttcggaaatggtttatagtcaagagttgaatttacca
gaaggagtggaaataataagtgttaaaccatcagcaggacacctgagttcttcctccgta
tatccagtttgtcatgccccttatctactggcaacttcttgctcagatggaaaagttagg
ttctggagatgcagagtgactcctgaggcagtggtttcttctacgccagagtatactata
aatagtaatgttacgtatatatgggaagaatggccactacttgttgaggatggacttctt
agtagtagtactgtgaatgttccaggcaggccaatagaagttagttgcgcacatacaaat
agattagctgtagcatacaagcagatgacatctaaaaatagtcgatgttctcaggatttc
atgatgcatgttagtatttttgaatgtgaatctacaggaggatcatgttggattctggaa
cagactcttcatttagatgaaataagcataatgttggactctgccattagtattgacagt
aatttaatggcatacaataaacaagaagtttatttatctaataatgagaggattttgccc
agcacaaagcacttggttcacttagactggatgtctaaggaagatggatcacatatccta
acagtaggaattggatcaaagctttatatgtttggccaactggttgggaacatgcatgac
caaagtagtaaggagatgtctgcattgccactgtgggaaaatgcaaaagttacatccctt
tgtaggtttgtactgctacggtgcgtggacttagtttcttcagtagaaggatcacctcct
ctgccagtttctttatcttgggtacgtgatggcatccttgtagttgggatggattgtgaa
atgcatgtttattctcagtggcaatccccttcaaaacaagagtcagttacgagtgattct
tacagtggaagcacaccatctattactagcttaatgaaacaaagccagtcagctggttct
ggcctgcatccaccaaagcgaaccttaaccagatccatgacaagtcttgcacagaaactt
agtggaaagagaactgcatttgatctgtctgtggaaatggaagattctggtctttttgaa
gcagctcatgcattatgtccaactttacctcagtaccaccctttccagcttctagagctt
atggaccttggtaaagtacgtagagcaaaagccatcctctctcatttggtgaaatgtatt
gctggggaagttgttgctataaatgaatctgaacctaatcatgatcggcgacttagatct
ctcacaattagtgctagtggaagcactgcaagagaccccaagacattcaacaaaactgag
aatacagactatacagaaatagactctgttccaccacttcctttgtatgcattgcttgct
gcagatgatgactgctcacatttttgtttagagaaatccaacaatcaaaataacttaaac
aaacaaaatggtttacccgatgaaaattatgaagatctttttcaaaactccagcctaaat
acagatgatcttaccgtgtttgaagcagatgaagataatacaaagccaaaggtcattgat
ctttctcagtacagcccaacttactttggaccagagcatgcccaagttctttctcgtcac
ttgatgcattctagcttaccaggtctcaccaggatggagcaaatgtcattgatggccttg
gcagatacaattgctactaccagtactgatattggagaaagcagagacagaaaccagggt
ggagaaacgcttgatgaatgtggcttaaaattccttctggctgttcagctgcacacattt
ctgacaacctcacttcctcctgtccatcgagcccagctacttcaccaaggcttgtctact
cgtcactttgcctgggcatttcattcagtagcagaagaagaactactgaacatgctccct
gctgtgcagaaaggggatccgacctggtcagaactcagagctatgggtgtaggatggtgg
gttcggaatacccatagtttgcgcagatgcatagaaaaggtagccaaagcagcttttcaa
cgaaacaacgatccacttgatgcagctattttttaccttgcaatgaaaaagaaggctgtg
atttggggattatacaggtcccaaaaagaaactaagatgacacagttctttgggaacaat
tttactgaagatagatggcgtaaagcagcattaaagaatgctttttctttattaggcaaa
cagcgctttgaacattctgcagcatttttcttgttggctggtcacttgaaggatgcagtt
gaggtctgccttgaaaaattgggtgacattcagctggctcttgtaatatcaaggctttat
gagtcagaatttgaagtatctagtatgtataaatccatactgcagaagagaattttggga
agtgcctttcctggtaaggagagttcatcaaacatgcattgtgacccttttctacgaagt
atggctttttggattttggaagattatagcagggctcttgatactctaattaagcaacct
gctggaaatgaagaagatgaaaatggtgcctccccaagttgtgacccttcagtgttcaac
ttttataattatctaaggacgcatcctctcctgctgagacgtcattttggctcttctgaa
acatcttcaacacgcatttgcctaactgtagaaaatggactggcagacaaaataaattta
agtgaaagaagattgtttttcactacagcacatgcgcatttaaaagctggctgtcccatg
ttggctctagaagtgttatcaaaaatgccaaaagtggtcaagaagtcaaagcctttttgt
acaaattctagtttaatggacacgagtaaagatttttcaccttcttcaccaataaggtta
gagaccaaggaagataaagcttccattgttgattgggcacaaccagtactaaatggtttg
ggatcgtcttcagattgttcatcagacaaacagtcaagctctgctctttcttttgattgg
agtcaaccaagtctagtattccaagatgaaccgttggagctaaagtgggaaagtgacaaa
gatgaagaaagtgaagattcttctcttgtaatgaaagagctgaaacctttgcagaagatg
acgagtgaaaagctagatgaaactagttctaactattcggagtctttcagtgcaggtgat
gaaaattatcttttaagtccatcagaagatgtgatctcagcacaattgaaatttagagca
tgcttgaagattctcacagtagagcttcgtacactatccactggttatgaggtagatggt
gggaagctgcggtaccagctttaccattggcttgaaagagaagttgtagctcttcaaaaa
acctgtgactacagtgctgaaatagaggaggttcaacctgggattagcgtgactgttgat
gaaattgcattaagtgaaaaccctgaagaattatctgaccaatcaaaagccatgctgcag
agagagaattttcagaaaaggcgacaatggcttctaaaataccagtcactcctgaggatg
tttcttagttattgtatacttcatggatctcatggtggggggttggcatctgtgaggatg
gaactgattttgcttttacaagaatctcagcaggaacagtcaatacaaacacttcctagt
cctctgccagaacagaactctatacctctactatttgcctgcactgccagtgccaaaaca
gttgtggccagtccattactgcatctcagcaacctgactcatgatatattacatgcagta
ataaaccttgattcaccacctcacccagatatccagaacaataagatacatgtaatgcat
accttagcagcatcactctctgcctgcatctaccagtgcctttgtggtggccacagctac
agttcattacaagcaaaccagttcactggaacagtatatcagacactgctgcttacccag
cgacatactctaagaacaacaagcttagatgaaactgtaactcccaatacatctccagct
caatggccaggaataacagctctgatacgtcgtttgaattctgctggcgaggaagcccag
ccaggactcacggttttactttgtgaaattctaacagcagtctatcttagtctcttcatt
catggtctagcaactcattccagcagtgaattgtatagaattatggcccatccttttaac
gacaaaatgtggtctgctgtctttggtggaggagctcatattcctagcagaggacagatg
caacagacaacaaaagctggtaggcacttctctatgcctagcccacaccaggtagtagtg
ttctctatggaatgtgtggggttttccaaatcccttgctgccatcagtactcatagtcct
accaaacatgcagtttcttcttctgtagacaatggtaagaagcaacaaaaaagttttacg
ctttcatcaaaaatctctccgaaagaaatttcacagtctccttcatcatctttggtagag
caagaatctccatcttacagggaaaagtttatccctcctgaactgagtatctgggactat
ttcatagcaaagccttttcttccaacctcacaaagtagagtggaatacgattcagaggag
agtcagggaagtgatgatgaggatgacgattttacatcagatttacaccttcaggagcac
tctaattcaaattcatacagttggtcactgatgcgattggctatggttcagttggtgctt
cataggttgaagaatttctaccccttggctgggcatgatctgtcagagcttccagttagc
tccccactgtgccatgccattctgaagacatttcagcgctgggagcaagttcttctccgg
cgacttgagatacatggtggtccacctcagaatttaatttctgctcatacttctgaggat
gcattatcggcaggtcctgcgctccttcgccacaaagctttgcttgaacctacaaacact
cctttcaaatctaacagtcatgttgcactgtctgtgaagaggctttggcagtacttggtt
aaacaagaggaagtccaggaaaccttcatcagaaatatatttacaaagaaaagatgccta
aatgagtcattagaggaccacagtgaaaccatcaaaaatactatgatggaggagcccatc
ttcaataagatagaagcagatctgggatatccaggaggtaaagcaagaattattcataaa
gaatctgacatcattactgcttttgcagtcaataaagcaaacaggaactgcattgcaata
gcttccagccatgacattcaagaactagatgtttctgggattctagctacacaaatctac
acctgggttgatgatgacacagaagtggaggctaaagggtctgatgacttcttggttata
catgctcgtgatgacctggcaaatgttcagggtactacaccttatacacacagcaatcct
ggcacccctatcaacatgccttggcttggtagcacacagactgggagaggtgcatctgtg
ctgatcaagaaggctattaataatgtcagaagaatggcttcccatccaacgctaccttat
tacttgacaggtgctcaagatggtagtgtgagaatgtttgaatggggccattcacaacaa
attacatgtttccgctctggtggcaactcaaggataacacgaatgagattcaatcaccaa
ggaaataagttcgggattgttgatgctgatggatatatatgtttatatcaaacaaactgg
aagtgttgcccacttactggaagcacacccaaaccatatctgacgtggcagtgtcataac
aaaacagccaatgattttgttttcatcagttcctcctctttgatagccacagctggacag
gctactgataacagaaatatatgtttgtgggataccttagttgcacctgcaaatagttta
gtgcatgcttttatctgtcatgatagtggagcaactgtgctagcatatgctccaaaacat
cagcttttaatatcaggaggcagaaaaggctttacttgtatacttgatcttcgccaaaag
caacaacgacagctattccagagtcatgattctcccgttaaagcaattgctgtggatcct
gcagaagaatactttgttacaggatcagcagaaggcaatataaagatatggagtttatct
acctttaatcttcttcacactttcatcaatgagcatgctcgacagtcaatcttcagaaac
attgggacaggagtcatgcagattgagacaggaccagcaaatcacatattctcctgtgga
gctgatggaacagtaaaaatgagaatcttgcctgatcaatttagcccagtaaatgaagta
ttgaaaaatgaagtgaaatttatgctctga
DBGET
integrated database retrieval system
