Trachemys scripta elegans (red-eared slider): 117879399
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Entry
117879399 CDS
T07347
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117879399 (DENND4C)
Membrane trafficking [BR:
tst04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117879399 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
117879399
NCBI-ProteinID:
XP_034630462
LinkDB
All DBs
Position
6:complement(99585075..99702382)
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AA seq
1952 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTSTSLDQEVNRFETKSAGPKAPITDLAVIIKSAGETVPEG
YTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDVGVLYEGKERVILGCEVIQA
TPYGRCANVNNSSATSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVYLCYKKSMPASNSIAYKAGLIFRYPEDDYESFPLSESVPLFCLPMGATI
ECWDPQTKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSRELLTEKQCMQLGLLTAVERK
VVTSKSINSNTCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPFPS
PQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKILL
HSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAAVLSAPVPFIVGVDSRYFDLYDP
PQDVVCIDLDTNMVYLSDDKKSVNWKQLPKKPCKSLLSTLRKLHPQLALVHRKTQEGSAV
EMTPIEADFSWQKKMTELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKTTAADSLFD
LQGFLKSRDRAYTKFYILLTKTQIFSRFIEECSFVSDKDTSLAFFDDCIEKLFPDKGTEK
GEKVDVDSAEDTRLIELDESQKSEHTVFIMPPEPPPDDGQARAPKYSYKNFPRLDFKLFD
RPQELKLSFNRHPAGGNISNSPALMAKRTKQEIKTAHKLAKKYYTNPPLWAKCLFSHCYS
LWFICLPAYIRVSHPKVRALQQAYDILIKMRKTDVEPLDEVCYRVVMQLCGLCGHPVQAV
RVLFEMKNAGVQPNAITYGYYNKAVLESHWPSSNRSGIFLWTKVQNVVRGVAQFRQCLKK
ATRSSQVSVIPAPRNATGGSDGDTVSHGSVDSSNDANSGEHTLFVRDLVRLDSIDNHSST
GGQSDQGYGSKDELIRDDGDNLLAAETLAEKDSSCIMEDLTGEVGGTGEKHQQSAEPHSS
AEPPAWGSSIVKVPSGIFDSTGRKNSSGTASSPLFITQDPVEDSVFHDASPKKTGEKGQK
RQKLFSERSCSFSTESRAGMLLKKGSLDLNSSEIAIMMGADAKILTAALSGAKTSPPHTS
KSSSFDGMGDQQVSGLSGTRTHVSEGAQELELKSSPVLEEPEEGQEHLENGGEDSATRAE
NVHAKLLDGNQPPNQKTDARDAVTKRNSFYGVIKPVEREDVEVGLDPLSLLATESIEPKP
SEPEEKIVSPVVARNLADEIESYMNLKSPLGSKSSSMELHRQESREVAAPSTLSCSQERR
SSLPSDSVPPAPEKSENRKSPLVSRSKTFTGRPKHQTHSRVQKERPPSLRALGRSSQHGS
LGSVVTSLSNLKLDNILSGPKIDVLKSGMKQAANVASRMWGSVTSQYNYSDDEEETHRPD
FTFPPGFEDHILGDNLSSKPGIPGLVTSELTQSTTSLGSSNSSGDVGKQHYTTGEVSFPR
SMKGLDSEKSEHGSSHNTSLSSIFQNCAMEVLMSSCSQCRVCGALVYDEEIMAGWAADDS
NLNTTCPFCKNTFLPLLNVEFKDLRGSASFFLKQSTSGDSLHSGNIPLTTDPLEQKPVSS
PAVADLISFSDHLKSNQTIAEETSSATEQSDVPEEQSEGPRAMKTSVINSSKRGASLTRS
HSVGGPLQNIDLTHRPSHGISTVSLPNSLQEVVDPLGKRPNPLPLSVPYLSPLVLRKELE
SLLENEGEQVIHTSTFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNGGVQLPLSS
LSQDSKLVYIQLLWDNINLHQEPGEPLYITWRNLNSVEKKSSIASEDQQATSTLVENIKL
SIQHNNVVEPINLLLQKVKPDIKRQRSFYREILFLSLVSLGRENIDIEAFDSEYRLAYKS
LTTEVLEKMQKIDAPPSSSVEWCRKCFGAPVI
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccaagagtggccgactactttgtagtggcaggactcactgat
acttcgacctctctggaccaagaagtaaaccgctttgaaacaaagtcagctggtccaaag
gctccaattacagacctagctgtcatcatcaagtcagctggtgaaacggtgcctgagggt
tacacctgtgttgaagccacccccacagcgcttcaagccaacttgaactatgggagtctt
aaaagtccagagctttttctttgctacaagaggggccgggacaaaccaccacttacggac
gttggagttctatatgaagggaaggaacgtgtaattttaggctgtgaggtgatccaagct
actccctacggtcgttgtgccaatgttaacaacagttcagctacttcccaacgaatcttt
attacctatcgaagggctcctccagtacggcctcagaattccttggctgtaacagatatc
tgtgttattgttaccagcaaaggagaaacgcctccccatacgttctgcaaagttgataag
aacttaaattgtggcatgtgggggtccagtgtgtacctctgttataagaagtctatgccg
gcttctaactcaatagcatataaagctggcttaattttcagatatccagaggatgattat
gagtcattcccattgtcagaatctgtacctcttttctgccttcctatgggagccactatt
gaatgctgggatcctcaaaccaaatacccattaccagtgttttcaacatttgtcctgact
ggttcttctgcagaaaaggtgtatggtgctgctattcaattttatgagccttattcccgg
gagctgctaacagaaaaacaatgtatgcagctgggtctcctgacagctgtggagagaaaa
gtggttacttccaaatccatcaattccaacacgtgcatctgccttctctctcactggcct
ttcttcgaagcctttcgaaaatttcttatgttcatctacaagctctctgtctctgggcct
catcctcttccaattgaaaagcacatatcccatttcatgcacaatatacctttcccttca
cctcaaagaccaagaatccttgtacagctttctgcccatgatgcattaatattgtctcaa
ccagtttctacacccttgccactcagtggagcaaacttcagtactttgctgatgaatctt
ggaccagaaaactgtgctactttgttactctttgtattgctagaaggcaagatcctgctg
cactctctgagaccagctgtactgactggagtagctgaagctgtagtcgctatgatattt
ccatttcagtggcagtgtccatacatcccgctgtgtcctttgtctctggcagcagtgctc
agtgctcctgttccatttatagttggagttgattcacgatactttgatctgtatgatcca
ccacaggatgttgtttgcattgacttagacacaaacatggtatacctatcggatgataag
aagagcgtgaactggaaacaacttcctaagaagccatgcaaaagtctactcagcacctta
aggaaattgcatccacagctggcgttggttcacagaaagacccaagaaggctctgcagtg
gagatgacgcctatagaggcagatttctcctggcagaagaagatgacagaacttgagatg
gagatccaagaggcttttctacgcttcatggcgtctattttaaaggggtacagaacattc
ctcaagccaattacccaggcaccttcaaataaaactactgctgctgattccttgtttgac
cttcaaggatttttaaaaagtagagaccgtgcctacacaaagttctacatacttctaacc
aaaacacaaatatttagccgcttcatagaagagtgcagttttgtgagtgacaaggatacc
agcttggcattttttgatgactgcatagaaaagctttttcctgataaaggaacagaaaag
ggagagaaggttgatgtagattctgcagaagatacacgcttaattgagcttgatgagtca
cagaaaagtgaacacacagtgtttataatgccaccagaacctccccctgatgatggacag
gcccgagcacctaagtacagctataaaaacttcccaagactagattttaagctcttcgac
aggccacaggagctcaagctttcattcaacaggcacccagctggaggtaacatttcaaat
agtccagcactcatggcaaagaggacaaaacaggagataaaaactgcccataaattagcc
aagaagtattacacaaacccaccactgtgggctaagtgcctctttagtcactgttatagc
ctatggttcatttgtctgccagcctacatcagagtttcccatcccaaagtcagagcactg
caacaggcatatgacattcttattaaaatgaggaaaaccgatgtggaaccactagatgag
gtgtgctatagagttgtaatgcagctctgcggactttgtggtcatcctgttcaggctgtg
agagtcctgtttgaaatgaaaaatgctggagtacagccgaatgcaatcacctatggttat
tacaacaaggcagttttggaaagtcattggcctagcagtaaccgcagtggtatctttctg
tggacgaaggtacagaatgtggtccgtggtgtagcacaatttaggcaatgcctaaaaaaa
gcaacaaggagctcacaggtgtctgtgataccagctcctcggaatgccacgggtggaagt
gatggggacacggtgagccatggtagcgtggatagttctaatgatgctaacagtggggag
cacacactcttcgtcagagacttagtcaggcttgattccattgataatcactctagcaca
gggggtcagtcagaccaaggctatggatccaaggatgaactcataagggatgatggagat
aatcttcttgcagctgagacactagcagaaaaagattcttcttgtataatggaagaccta
acaggagaagttggtggtactggtgaaaagcatcagcagagtgcagaacctcatagttca
gcagaaccacctgcttggggaagcagtattgtgaaagttccatctggcatttttgatagc
actggcaggaaaaacagcagtggaactgcatctagcccactctttataactcaggatcca
gttgaagattcagtctttcatgatgcttctcccaagaaaacaggtgaaaaagggcagaag
agacaaaagctcttttcagagaggagctgcagttttagcactgaaagcagagcaggtatg
ctgctgaagaaaggcagtttggacttgaactctagtgaaatagcaataatgatgggagca
gatgccaagatcctcacagcagctttatccggggccaaaacttcaccccctcacactagt
aaatccagtagctttgatggtatgggtgaccagcaggtctctgggctgagtggcaccagg
actcatgtgagcgaaggtgctcaggaactagagcttaagtcttcaccagtgctggaggag
cctgaggaagggcaagagcaccttgagaacggaggtgaggacagtgcaaccagagctgaa
aacgttcatgccaaacttctggatggtaatcagcccccaaaccagaaaacagatgccaga
gatgcagtgactaaaaggaatagcttctatggagtgattaagcctgttgaaagggaagat
gttgaagtgggcttggaccctttatctttgctggctacggagagtatagaaccaaaaccc
tcagagcctgaagaaaagattgtgtcaccagttgtagcacgtaatctggcagatgaaata
gaaagctatatgaatctaaagagccccctgggtagcaagtcttccagcatggagcttcac
aggcaagagagcagagaagtagcagcccctagtacacttagttgctcccaagagaggaga
tcaagcttaccttcagattctgtcccaccagccccagagaagagtgaaaatcggaaaagt
cctttagtttccaggtctaaaacctttacggggcgaccaaagcatcaaacccattcacga
gttcaaaaggagcggcctccatcattaagggcgttgggtcgctcttcacagcatggctca
ttggggtctgtggtaacaagtttatccaatctgaagctagacaatatactctctggaccg
aaaatagatgttctgaagtctggaatgaaacaagcagctaatgtagccagtaggatgtgg
ggctctgtaacctcacaatataactactcggatgatgaggaagaaacccatcgaccagac
ttcacctttcctcctggttttgaggatcatatcttaggagacaatctgtcgtcaaaacca
ggaatccctgggttagtaaccagtgaactcacacaaagcactaccagtcttggcagcagc
aacagcagcggagatgtagggaaacagcactacacaacaggtgaggtttcgttcccaaga
agtatgaaaggtctggattctgagaagtcagaacatggatcctcccacaataccagtttg
tccagcatcttccagaactgtgcaatggaggtcctgatgtcaagctgttctcagtgcaga
gtttgtggagcattggtttatgatgaagaaattatggctggatgggctgcagatgactct
aacttgaacaccacatgtccattttgtaaaaacaccttcttacctcttcttaatgtggag
tttaaagacttgcgtggatctgcgagcttttttctgaaacaaagtacatctggagatagt
ttacatagtggaaatattccattaaccactgatcctctggagcagaaacctgtgtccagt
cctgctgttgctgatttgatcagtttttcagatcacctaaagtccaaccagaccatagct
gaagaaaccagctctgcaactgagcaaagtgatgtgccagaagaacagagtgagggcccc
agggctatgaagacatctgttatcaattcatcaaaacgaggagcatctttgactcggagc
cacagtgtcggaggccctctgcaaaatattgatctcacacacagaccatctcatggcatt
tcaacagttagtcttccaaatagcttgcaagaagttgtggatcctttagggaaaaggcca
aaccctctccctctgtctgtgccctacttgagccctctggtgctacgtaaagagcttgaa
tccttgttagagaatgagggggaacaagtgattcatacatccacatttatcaaccaacat
cccatcattttctggaacctagtttggtatttccggcgcttggatctacctagcaacttg
ccaggactcattctgacgtcggaacactgtaatggcggggtgcagcttcctttgtcatct
ctgtctcaagacagtaagttagtatacatccagctattgtgggacaacatcaaccttcac
caagagcctggagagcctctatatataacttggagaaatctcaattcagtggagaagaaa
tcatccatagcttcagaagatcagcaggcaacaagcactttagtggagaacatcaaactg
agcattcaacacaacaatgttgttgaaccaatcaacctccttctgcagaaagttaaacca
gacatcaaacgacaaaggagtttttatagagaaatccttttcctgtctttggtgtctctt
gggagagagaacattgacattgaggcctttgacagtgagtacagacttgcatataaaagt
ctaacgacagaggtgcttgagaaaatgcagaaaatagatgcaccgccaagcagcagtgtg
gagtggtgcaggaaatgctttggagcacctgtcatataa
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integrated database retrieval system
