Trachemys scripta elegans (red-eared slider): 117879425
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Entry
117879425 CDS
T07347
Symbol
GRIN2B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04020
Calcium signaling pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117879425 (GRIN2B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117879425 (GRIN2B)
04082 Neuroactive ligand signaling
117879425 (GRIN2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117879425 (GRIN2B)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Glutamate (ionotropic)
117879425 (GRIN2B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
117879425
NCBI-ProteinID:
XP_034630508
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All DBs
Position
1:complement(86334815..86606111)
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AA seq
1500 aa
AA seq
DB search
MRPRAECYSPKFWLVLAVLATTGGAARAQKSHPSIGVAVILVGTSDEVAIKDAHEKDDFH
HLSVVPRVELVAMNETDPKSIITRICDLMSDRKVQGVVFADDTDQEAIAQILDFISAQTL
TPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQ
DFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEATYI
FEVANSVGLTGYAYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAII
TTAASDMLSEHSFIPEPKSSCYNTQEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHP
KLVIILLTKERKWERVGKWKDKSLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVI
VESVDPLSGTCMRNTVPCQKRIVTENKTDEEPDYVKKCCKGFCIDILKKISKSVKFTYDL
YLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMV
SRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGP
SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE
YVDQVSGLSDKKFQKPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYMVKFNQRGVDDAL
FSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDL
AILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFIC
EHLFYWQFRHCFIGVCSGKPGMVFSISRGIYSCIHGVAIEEHQSAMNSPTATMNNTHSNI
LRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNNPPCEENL
FSDYISEVERTFGNLQLKDSNVYQDHYHHHHRPHSIGSTSSIDGLYDCDNPPFSAQPRSI
GKKPLDIGLPPSKHSQLGDLYGKFSFKNDRYSGGGGHDDLIRSDVSDISTHTVTYGNIEG
NAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPPRSPDHKRYFRDKEGLRDFYLD
QFRTKENSPHWEHVDLTDIYKERGDEFKRDAVGGGGSCTNRAHHKHGSADFGGANDHKHG
VVSGVPAPWEKNLTNLDWEDRPGANFCRSCPSKLHNYTPAVVGQNSTRQPCIRCEACKKA
GNLYDISEDNSLQELDQPSAPVPVTTSATSSKYPQSPSNSASKVQKKNRNKLRRQHSYDT
FVDLQKDESALAPRSVSLKDKGRFLEGSPYAHMFDMSSSETAFANNKSSVPATSHHHHNN
PGSSGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSYFFRQPVVAGGPKARPDFRAIV
TTNKPVVSALHGAVPARFQKDICIGNQSNPCVPNNKNPRAFNGSSNGHVYEKLSSIESDV
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccagggcggagtgttattctccaaagttttggctggtgctggcagtcctagcg
acgacgggtggtgcggcccgtgcccagaagagccaccccagtatcggcgttgctgtcatc
ctggtggggacctcagacgaagtagccatcaaggacgcccacgagaaagatgacttccac
cacctctcagtggtgccccgagtggaactggtggccatgaatgagacagatcccaagagc
atcatcacccgcatctgtgacctcatgtcagaccggaaggttcaaggtgtggtgtttgct
gatgacacagaccaggaagccattgctcagatcctggacttcatttctgcccagactctc
acgcccatccttggcatccacggaggctcctccatgatcatggcagacaaggatgagtca
tccatgttcttccagtttggcccatcgatagaacagcaagcctccgtcatgctgaacatc
atggaagaatatgactggtacatcttctccattgtcactacctacttccctggctaccag
gacttcgtcaacaagatccgcagcaccatcgagaacagcttcgtgggctgggagctggag
gaggtcctcttgctggacatgtccctggatgatggagactcaaagatccagaaccagctg
aagaagctccagagccctgtcatactcctctactgcactaaggaagaggccacctacatc
tttgaggtggccaactctgtggggctgacaggctatgcttacacatggatcgtgcccagc
ctggtggcaggggatacagacacagtgccatctgagttccccactggcctcatctctgtg
tcgtacgatgagtgggactatggccttcctgccagggtgagggatgggatagccataatc
accacggctgcttctgacatgctgtctgagcacagcttcatccctgagcccaagagcagc
tgttacaacacccaggagaaacggatctaccagtccaacatgctgaacaggtacctgatt
aatgtcacctttgaagggaggaatttgtccttcagtgaagatggctaccagatgcacccc
aagctggtgatcatccttctgaccaaggagaggaaatgggagagggtggggaaatggaag
gacaagagcctccagatgaagtattatgtgtggccccgctttgagctgtaccctgattct
gaggaacgtgaggatgaccatctgagtattgtgaccctagaggaggcgccgttcgtcatt
gtggagagcgtggacccactaagtggcacctgcatgaggaatacagtcccctgccaaaaa
cgcatcgtgaccgagaacaagacggatgaggagcctgattacgtcaagaaatgctgcaag
ggattctgcattgacatcctcaagaaaatctccaagtctgtcaagttcacctatgacctc
tacctggtgaccaatggcaagcatgggaagaagatcaatgggacgtggaatggaatgatt
ggggaggtggtcaccaagcgggcctacatggcggtaggatccctcaccataaatgaggag
cggtcagaggtggtagacttctctgtgcccttcatcgagacaggaattagtgtcatggta
tcacgtagcaacgggactgtctcaccttctgccttcctagaaccattcagtgctgacgta
tgggtgatgatgtttgtcatgctgctcataatctctgcagtggctgtcttcgtctttgag
tacttcagccctgtaggttacaatcggtgccttgctgatggcagagagccaggtggaccc
tctttcaccattggcaaagctatctggttgctgtggggtctggtgtttaacaactccgtg
ccagtgcagaatcccaaaggtaccactagcaagatcatggtgtctgtgtgggccttcttt
gctgtcatcttcctggccagttatactgccaacctggccgccttcatgatccaagaggag
tacgtggaccaagtgtctggactgagcgacaaaaagttccagaaacctaacgacttctca
ccccctttccgatttgggacggttcccaatggcagcacagagaggaacattcgcaacaac
taccctgaaatgcatagctacatggtgaagttcaaccagaggggggtggacgatgcccta
ttctcgctgaagactgggaaattggatgcattcatttatgatgcagcagtgctaaactac
atggctggcagagacgaaggctgcaagctggtaacgattggtagtgggaaggtttttgcc
tccactggctatggcattgccatccaaaaggactcgggctggaagcgtcaggtagatctt
gccattctacaactttttggtgatggggagatggaagagctggaagctctctggcttact
ggaatttgtcacaatgaaaagaatgaggtaatgagcagccagctggacatagataacatg
gcaggcgtcttctatatgctgggggcagccatggccctcagccttatcaccttcatctgt
gagcatctcttctactggcaattccgccactgcttcataggcgtctgctctggcaagcct
ggcatggtcttctccatcagcaggggtatctacagctgcatccatggggtagccattgag
gagcaccagtcagcgatgaactcccccacagccaccatgaacaacacccattccaacatc
ttgcgcctgcttcgcacagcgaagaacatggccaacctgtcaggtgtcaatggctcaccg
cagagtgccctggacttcatccgccgcgaatcctcagtctatgatatctctgagcaccgc
cgcagcttcacccactctgactgcaagtcttataacaacccgccctgtgaggagaacctc
ttcagtgactacattagcgaagtagaacggacctttggcaacctgcaactgaaggacagc
aacgtgtatcaggaccactaccaccatcaccatcggccccacagcattggcagtaccagc
tccatcgatggactgtatgactgtgacaacccacccttctccgctcagcccaggtccatt
ggtaagaagccactggacattggtttgccaccttccaagcatagtcagctaggtgacctc
tatggcaagttctccttcaagaatgatcgctacagtggcggagggggccatgacgacttg
atccgctcagatgtctctgacatttccacccatacggtgacctatggcaacatcgaaggc
aacgccgccaagcggcggaaacagcagtataaggacagcctgaagaaacgtccagcttca
gccaaatcacggcgggagtttgatgagattgagctggcctaccgcaggcgcccgccccgc
tccccagaccacaagcgctattttagggacaaggaagggctacgcgacttctacctggac
cagttccggaccaaggagaactcaccacattgggagcatgtggacctgacggatatctac
aaagagcggggagatgagttcaagcgcgatgctgtagggggcggagggtcctgcaccaac
agggcccaccacaagcatgggtcagcggactttggaggagccaatgaccacaagcatggt
gttgtgagtggagtgccagcaccatgggagaagaacctgaccaatctagactgggaagac
cggccaggggctaatttctgccgtagttgcccctctaaattgcacaactataccccggca
gtggtggggcaaaactctacccgccagccctgcatccggtgtgaggcctgcaagaaggca
ggcaacctctatgacatcagtgaggacaactctctccaagagctggaccagccatctgcc
ccggtgccagtgacgaccagtgccacctcctccaagtatcctcagagcccatctaactct
gcctccaaggtgcagaagaagaaccgcaacaagctccgccggcagcactcctatgacacc
ttcgtggacctgcagaaggatgagtcagccctggctccccgcagcgtgagcttgaaggac
aagggccgctttttggaggggagcccctacgcccacatgtttgacatgtcatccagcgag
accgcttttgccaacaacaagtcctcagtgcccgccaccagccaccaccaccacaacaac
cctggcagcagcggctacatgctcagcaagtcactttaccctgaccgggtcacacaaaac
cctttcatccccacttttggggatgaccaatgcttgctccatggcagcaaatcctatttc
ttcaggcagcctgtggtggcaggtgggcccaaagccaggccggacttccgagccattgtc
accaccaacaagccagtggtctcagcccttcacggggctgtgccagcccgttttcagaag
gacatctgtatagggaaccagtccaacccctgtgtgcctaacaacaaaaaccccagggct
ttcaacggctccagcaacgggcatgtttatgagaaactctccagtattgagtctgatgtc
tga
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integrated database retrieval system
