Trachemys scripta elegans (red-eared slider): 117879445
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Entry
117879445 CDS
T07347
Symbol
CHRNA6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117879445 (CHRNA6)
04082 Neuroactive ligand signaling
117879445 (CHRNA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117879445 (CHRNA6)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117879445 (CHRNA6)
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
117879445
NCBI-ProteinID:
XP_034630530
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Position
6:124019028..124034923
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AA seq
470 aa
AA seq
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MSLIKGCSACEPEERLFQKLFSHYNHFIRPVENVSDPVTVHFEVAITQLANVDEVNQIME
TNLWLRHIWNDYKLRWDPMEYGGIEFVRVPADKIWKPDIVLYNNAVGDFQVESKTKALLK
YDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAKIDLLIIGSKVDMNDLW
ENNEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTLLV
FYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFVTLSIVIT
VFVLNIHYRTPTTHTMPKWVKSVFLKLLPKVLMMTRPLEPQKEANSKKSKKGLANKSSKM
KQYGDVKLYKEQRCCHCDKVNELVTGKRRLSPQPMKWGMEHVKYSAEVGEVISNVQFIAE
NMRSQNETKEVEDDWKYVAMVIDRVFLWVFIVLCVFGTGGLFLQPLIADT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgattaaaggttgctcagcatgtgaaccagaagaacggttatttcaaaaactt
ttctcccattacaaccacttcatcagaccggtggaaaatgtatctgatcccgtgacagta
cattttgaagtggcaattacacagcttgcaaatgtggatgaagtcaatcagattatggaa
accaacctgtggctgcgacatatttggaatgactataaattgcgatgggatccaatggaa
tatggtggaattgaatttgttcgggtgccggcggataaaatttggaaacccgatatcgtc
ttgtataacaatgctgttggggattttcaagtcgaaagcaagaccaaagctcttcttaaa
tatgatgggatgatcacttggactccacctgctatttttaaaagctcctgtcctatggac
atcacattttttccctttgaccatcagaattgttcactgaaatttggctcctggacatat
gacaaagccaaaattgacctcctgattattggatccaaagtggatatgaatgacctttgg
gaaaacaatgaatgggaaatagttgatgcttctggctataaacacgatataaaatataat
tgttgtgaagagatctatacagatataacatactccttttatatccgaaggctacccatg
ttttacaccattaatctgatcattccctgtctcttcatttcattcctaactctattagtc
ttttaccttccgtctgactgtggtgagaaggtgaccctctgcatctcagtgctactctct
ctgactgtatttttgttggtgatcacagagacaatcccgtcaacctctctggtcattcca
ctggttggcgaatacctgctcttcaccatgatatttgtgaccctatcaattgtcatcaca
gtgtttgtgctgaacatccattacaggactccaaccacacacaccatgcccaaatgggta
aaaagcgtctttctcaagctcctgcccaaagtcctgatgatgacgagacctctagagccg
cagaaggaagccaactctaaaaagagtaagaaagggcttgccaataaatctagcaagatg
aagcaatatggagacgttaaattatacaaggagcagagatgctgccactgtgacaaggtg
aacgaacttgttaccggcaaaagaagattgagccctcagcccatgaaatgggggatggag
cacgtcaagtactccgctgaagtcggcgaggtaattagcaacgttcagttcatcgctgaa
aacatgaggagccaaaacgaaactaaagaggtggaggatgactggaagtacgtggctatg
gtgatagacagggtgttcctttgggtgttcatcgttctctgtgtgtttgggacaggaggg
ttatttctgcagccactaatagcagacacataa
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integrated database retrieval system
