Trachemys scripta elegans (red-eared slider): 117879469
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Entry
117879469 CDS
T07347
Symbol
HAPLN1
Name
(RefSeq) hyaluronan and proteoglycan link protein 1
KO
K06848
hyaluronan and proteoglycan link protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117879469 (HAPLN1)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117879469 (HAPLN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Xlink
V-set
Ig_3
Ig_2
I-set
Chordopox_A33R
ig
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
117879469
NCBI-ProteinID:
XP_034630566
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Position
6:complement(49464635..49555845)
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AA seq
352 aa
AA seq
DB search
MKSLLFLVLISICWAEHTGNYTLEHDRIIHIQENGPRLLVEAEQTKVFSHRGGNITLPCK
FYRDHTSAGSGTHKIRVKWTKLTSDYLKEVDVFVAMGLHQKSYGNYQGRVFLKKGSENDA
SLVITDITLEDYGRYKCEVIEGLEDDIAVVSLDLQGVVFPYFPRLGRYNLNFHEAQQACL
DQDSVIASFDQLYEAWRSGLDWCNAGWLNDGSVQYPITKPREPCGGKNTVPGVRNYGFWD
KDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLKDGSQIAKVGQIFAAWKLLGYD
RCDAGWLADGSVRYPISRPRRRCSPDEAAVRFVGFPDKKHKLYGVYCFRVYN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtctactttttctggtgctgatttctatctgctgggctgaacatactggcaac
tacactctggagcatgacagaattattcacatccaagaaaatggaccccgtctacttgtg
gaagcagaacaaactaaagtcttctcacacaggggtggcaatatcacactaccgtgtaaa
ttttaccgtgaccatacatcggctggctcaggaacccacaaaattcgtgtcaagtggacc
aaactcacctcagattacctcaaggaagtggacgtctttgtcgcaatgggactccaccag
aagagttatggaaactaccagggcagggtgtttctgaaaaaaggcagtgaaaatgatgct
tctcttgtaatcacagatataacactggaggattatgggagatataaatgtgaggtgatt
gaaggattagaggatgacatagcagtggtatctctggatttacaaggtgttgtattccct
tactttccacggctgggtcgctacaacctaaacttccacgaggctcagcaagcttgtctg
gaccaagattctgttatcgcctcctttgaccaattgtatgaggcgtggaggtcggggctg
gattggtgtaatgcaggctggctcaatgatggatcagttcagtaccctatcaccaaaccc
agagagccctgcggaggaaagaacacagtgcctggagtcaggaattatgggttctgggat
aaagataaaagcagatatgatgttttctgttttacatcaaacttcaatggccgtttttac
tacctaatacacccaaccaagttgacctatgatgaagctgtgcaggcctgcctcaaggat
ggatcccagattgctaaagtaggccagatatttgctgcctggaaacttctaggttatgat
cgctgtgatgccggctggttggctgatggcagtgtccgctacccaatctccaggccaaga
agacgctgcagtcctgatgaagcagcagtgcgctttgtaggcttcccagataaaaaacac
aagctatatggtgtctactgtttcagggtgtacaactga
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