Trachemys scripta elegans (red-eared slider): 117879480
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Entry
117879480 CDS
T07347
Symbol
HEXB
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00511
Other glycan degradation
tst00513
Various types of N-glycan biosynthesis
tst00520
Amino sugar and nucleotide sugar metabolism
tst00531
Glycosaminoglycan degradation
tst00600
Sphingolipid metabolism
tst00603
Glycosphingolipid biosynthesis - globo and isoglobo series
tst00604
Glycosphingolipid biosynthesis - ganglio series
tst01100
Metabolic pathways
tst04142
Lysosome
Module
tst_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117879480 (HEXB)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117879480 (HEXB)
00513 Various types of N-glycan biosynthesis
117879480 (HEXB)
00531 Glycosaminoglycan degradation
117879480 (HEXB)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
117879480 (HEXB)
00604 Glycosphingolipid biosynthesis - ganglio series
117879480 (HEXB)
00511 Other glycan degradation
117879480 (HEXB)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117879480 (HEXB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tst03110
]
117879480 (HEXB)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
117879480 (HEXB)
Chaperones and folding catalysts [BR:
tst03110
]
Intramolecular chaperones
Others
117879480 (HEXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
117879480
NCBI-ProteinID:
XP_034630580
LinkDB
All DBs
Position
6:complement(44571458..44601116)
Genome browser
AA seq
559 aa
AA seq
DB search
MQGQRRAMEPARLFLGLLAVSAALAASSLHQRPPQPELLLEEEEPELGESPSGSLWPLPR
SLRILPGQFQLAPTRFQLVHGPGSTAGPGCALLQDAFRRYYEYIFGYSKWQNRGQRPLPT
GTELFQLQVIIGSKDSECDNYPTISSNEAYQLSVTQPVAVLRAEKVWGALRGLETFSQLV
YEDDYGSFLINESEITDYPRFAHRGILLDTSRHFLPLKSILTNLDAMAFNKFNVLHWHIV
DDHSFPYQSATFPDLSGKGSYSYDHIYTPTDVRLVIDYARLRGIRVIPEFDSPGHTQSWG
KGQKDLLTPCFNGEHRSGSYGPVNPILNTTYHFMTDLFKEISSVFPDAYIHLGGDEVDFT
CWKSNPDVTEFMKQQGFGIDYAKLESYYIQKILDIVSSTNKGYIVWQEVFDTGVKIKPET
IVEVWIGTLYTAELSRVTGAGFTTILAAPWYLDYISYGQDWKKYYSVEPLNFPGCEKQKK
LVLGGEACLWGEFVDATNLTPRLWPRASAVGERLWSSKNVTNIGDAYNRLVKHRCRMLRR
GIAAEPLFVGYCDHEYRGL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcagggacagcgccgagccatggagccagcccggctgttcctggggctcctggccgtc
tccgcggcgctggccgcctccagcctccaccagcgccccccgcagcccgagctcctgctg
gaggaggaggagccggaactgggcgagtccccctccggctctctctggcctctgccccgc
tcgctccgcattctcccgggccagttccagctagccccgacccgcttccagctagtgcac
ggcccgggctccacggcggggcccggctgcgccctcctgcaggacgccttccgcaggtat
tacgagtacatctttggttattccaaatggcaaaatcggggtcaaagaccgcttcccact
ggcacagagttatttcagcttcaagtcataattggttccaaagactccgagtgtgacaat
tatcccaccatctcgtcgaatgaggcttatcagttaagtgtaacacaacctgtggcagta
ctgagggcagaaaaggtctggggtgcattaagaggtttggaaaccttcagccagttggtc
tatgaagatgactatgggagtttccttatcaatgaatcagaaatcactgactacccaaga
tttgctcacagaggaatcttacttgatacatcaagacactttctacccctcaaaagtatt
cttacaaacctggatgccatggcttttaacaagtttaacgttctccactggcacatagta
gatgaccattcattcccttaccagagcgccactttccctgacttgagtggcaagggctct
tattcctatgatcacatctatactccgactgatgtccgtctggtgattgactatgctcgg
ttaagaggcattagggttatcccagagtttgatagcccaggacatacacaatcttggggg
aaaggtcaaaaagaccttctcacaccatgtttcaatggagagcaccggagtggttcttat
ggacctgtaaaccccattttgaatacaacttatcatttcatgactgacctcttcaaagaa
attagcagtgtatttcctgatgcctacatccacttgggaggagatgaagtggacttcact
tgttggaaatctaaccctgacgtgacagagtttatgaagcagcaaggatttggcattgac
tatgctaaactggaatcttactatattcagaaaatcttggatattgtttcctcaactaac
aaaggatacatagtctggcaggaggtgtttgatacaggagtaaagataaaacctgaaaca
atagttgaagtgtggataggaactttgtataccgcagaactaagccgtgtaaccggagct
gggttcaccacgatcctggcagccccctggtacctagactatattagttacggacaggac
tggaagaaatactacagcgttgagccgctcaacttccctgggtgtgaaaagcagaaaaag
ctggtgctaggtggagaagcctgcctttggggagaatttgtggatgcaactaacctcaca
ccaagattatggcctcgagcaagtgctgttggggagaggctctggagcagtaaaaacgtg
actaacataggggatgcttataacagactagtgaagcatcgttgtcgcatgctcagacgt
ggaatagcagctgaaccactgtttgtcgggtattgtgatcatgaatatagaggcctgtaa
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