Trachemys scripta elegans (red-eared slider): 117879516
Help
Entry
117879516 CDS
T07347
Symbol
PDE6B
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
KO
K13756
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [EC:
3.1.4.35
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00230
Purine metabolism
tst01100
Metabolic pathways
tst04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
117879516 (PDE6B)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117879516 (PDE6B)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
117879516 (PDE6B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
HD-CE
DUF6115
Het-6_barrel
Motif
Other DBs
NCBI-GeneID:
117879516
NCBI-ProteinID:
XP_034630658
LinkDB
All DBs
Position
6:122658321..122701277
Genome browser
AA seq
842 aa
AA seq
DB search
MSIKEDDVEKFLDGNPAFAKQYFDKKLRPEPLSSNQTSEESEILFELIQDMQESINMEKV
VFKTLRRISCLIHADRCSLFMYRQRNGTPELATRLFNIEKDSTLEECLVAPDCEIVYPLD
MGIVGHVAQTKRTMNIKDVNECTQFSRFVDELTQYTTRNILATPITNGKDLVAVIMAINK
MHGPFFTSSDESLFLKYLNFASLNLKIYHLSYLHNCETRRGQVLLWSANKVFEELTDIER
QFHKAFYTVRAYLNCDRYSVGLLDRTKQKEFFDLWPVLMGEVPPYSGPRTPDGREIVFYK
VVDYILHGKEDIKVIPNPTADHWALATGLPTYVAESGFICNIMNAAADEMFKFQEGPVDD
SGWTIKNVLSMPIVNKKEEIVGVATFYNRKDGKPFDEQDETLMESLTQFLGWSVLNTDTY
DKINKLENRKDIAQDMVLYHVKCDKDEIQEILPTRERLGKEPMECEEDQLTVLLKEELPD
PIQSEIYEFHFCDFKCTELELVKCGIQMYYELGVVKKFQIPQEVLVRFMYSVSKGYRKVT
YHNWRHGFNVAQTMFTLLMTGKLKRYYTDLEALAMVTAALCHDIDHRGTNNLYQMKSQHP
LAKLHGSSILERHHLEFGKFLLSEESLNIYQNLNRRQFEHVNHLMEIAIIATDLALYFKK
RTMFQKIVDESKTYDNENSWTEYLSLETTRKEIVMAMMMTACDLSAIAKPWEVQSKVALL
VAAEFWEQGDLEISVLQQQPIPMMDRKKAPELPKLQVGFIDFVCTFVYKEFSRFHEEIQP
MYERLLNNRKEWKALGDEYDAKMKVLEEEKKKEEEKMAAKQAAMMTTCNGGTTPPSRTCC
II
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaaggaagatgatgtggagaagtttctcgatggtaaccctgcttttgccaag
caatactttgataagaaactgagaccagagccactgagcagcaatcaaacatcagaggag
agcgagatactttttgagttgatccaagacatgcaggaaagcattaacatggagaaggtt
gttttcaagactctaagaagaatcagctgtctcatccacgcagaccgctgcagccttttt
atgtacaggcaaaggaacggcacaccagagctagctaccaggcttttcaatatcgagaaa
gacagcacgctggaggaatgcttggtggcgccagattgtgaaattgtctatcctttggac
atgggcatcgtggggcatgttgctcaaaccaagagaactatgaacatcaaggatgtcaat
gagtgcactcagttcagcagatttgttgatgaactcacccaatacactacaaggaacatc
cttgcaactcccatcacgaatggcaaagatctagttgctgtgatcatggccattaataag
atgcatggcccattcttcaccagctctgatgaaagtcttttcctgaagtatctgaatttt
gcctccttaaacctgaaaatttatcatttgagttatcttcacaattgtgaaactcgaaga
ggccaggtgctgttgtggtcggccaataaggtatttgaggagctgacggacatcgagagg
cagttccacaaagctttttacacagtgagagcatatttgaactgtgatagatattcagtg
ggccttctggataggaccaaacagaaggaatttttcgacttgtggccagttctaatgggt
gaagttccaccttattccgggccccggactccagatggcagagaaatagtcttttacaaa
gtcgttgattatatcctacacggaaaggaagatattaaagttatcccaaatcccacagca
gatcactgggcacttgctactggactcccaacgtatgtagcggaaagtggctttatctgc
aacattatgaatgctgctgcagatgagatgtttaaatttcaggaaggtcctgtagatgac
tcaggatggactatcaaaaatgtattatcgatgccaatagtaaataaaaaagaagaaatt
gttggtgttgccacattttacaacagaaaagacgggaagccattcgatgaacaggatgag
actctcatggagtctttgacccagttcctgggctggtctgtcctcaacacggatacttac
gataagataaacaagctggagaatcgcaaggacattgctcaggacatggtgctgtaccac
gtgaagtgcgataaggatgaaattcaggaaatcctgccaacacgagagaggctggggaaa
gaaccaatggaatgtgaagaagaccaattgacggtactactgaaagaagaactgccagac
cccattcagtctgagatctacgagttccacttctgtgatttcaagtgcaccgaactagag
cttgtgaagtgtggaattcagatgtactatgagcttggggtggtgaaaaagttccagatt
ccacaagaggtgctggtgagattcatgtattccgtcagcaagggttacaggaaggttact
taccacaactggcggcacggcttcaatgtggcacagaccatgttcacgcttttaatgact
ggcaaactgaagcgttactacacagaccttgaagcccttgctatggtaactgcagctttg
tgtcatgatattgatcacaggggcaccaacaacctgtatcagatgaaatctcaacatcct
ttagcaaaacttcatggttcatcaattttagagagacaccacttggaatttggaaagttc
ttgctttcagaagagtccctgaatatctaccagaatctcaacagacgacagtttgagcat
gtgaatcatttgatggaaattgctatcatagcaactgacttagcgctttacttcaaaaag
agaactatgtttcagaagattgttgatgagtccaagacgtatgacaacgaaaattcctgg
actgaatatttgtctctggagaccacaagaaaagagattgtcatggccatgatgatgact
gcctgtgacttatctgcgatcgctaaaccctgggaagtgcagagtaaggtagctctccta
gtagcagctgaattctgggaacagggagacttggaaataagtgtactccagcagcagcct
attcctatgatggacaggaaaaaagcaccggagcttccaaagcttcaagtcggtttcatt
gactttgtgtgcacatttgtctataaggaattttcacgtttccacgaggaaattcagccg
atgtatgagagattgctgaacaacagaaaggaatggaaggctcttggtgatgagtatgat
gcaaaaatgaaagtgctggaagaagagaagaaaaaagaggaggaaaaaatggctgcaaag
caagccgctatgatgacaacttgcaatggaggaacaactcccccatctagaacctgttgt
atcatttaa
DBGET
integrated database retrieval system
