Trachemys scripta elegans (red-eared slider): 117879524
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Entry
117879524 CDS
T07347
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117879524 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117879524 (NIPBL)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117879524 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd3
Cnd1
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
117879524
NCBI-ProteinID:
XP_034630662
LinkDB
All DBs
Position
6:23008297..23295438
Genome browser
AA seq
2830 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GMMMPQYKLSQNSMHGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVSGGMRNIHENKVSSQLSGNSANHHADNS
RHGSNEDYLQMVHRLSSDDGESSIRNAASFSLRSPQSVCSPAGSDGTPKGSRPPLIVQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSNVSEGDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGTITPYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSAGNGSRPA
LMVSIDLQQAGRVDSQATVTQDSDTIKKPEEIKQCNDGSIFIPQEDPVGVLKFKPENHPE
TLRKKSDSECQKTDIQQNESKQTEVQQNESKWMESKHNESKQIDAKHESKHDSRPMDVKQ
NESRPMETKQNENRQMDVKQNESKQNNGKQDIKQRPETPKQKNEGRPETPKQKNEGRPET
PKQKNEGRPETPKHRHDNRRDSSKPSSEKKPEISKHKQEIKSDPSRVKSESRSDPTKQRP
DGRSVPETPRRDHESLKQKSEDRGESERYKGDPSKIRRPEYLRSSSKSEHDSKHGIKSDS
SKTEKLERKHRHESGESRERFSSGEQKSRPDSPRIKQESKGDSSKSRLDKPGFKSPNSKD
ERRTDGNKSKVDSNKPHTDNKAEFPSYLLGGRSGALKHFVIPKIKRDKDGNVTQEPRKTE
IKGEQKDKVEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRSSCFKPNKNKSS
KSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNES
EEAFESSRKRHKKDRDDDKAWEYEEHDKRSSGDHRRSSHHEGRRTSGSSRYRNRTPEDSD
MDDYSPPPPLSDVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFSASVENILENLED
MDFTTFGDDDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQD
GSKLSTLLNHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIER
VIQYTKFHLQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVS
SLAELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEE
IFTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSVEKDSNSEE
ESNKKVDQDVLITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFVQDLLSTVNK
PEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIA
RILKQEKRMICWYIAGIKSNMGGSVSSHKMETSLLQETVSGGEDEIQQLQKALLDYLDEN
TETDASLLFSRKFYIAQWFRDTTMETEKAMKSQKDEDSSEGTHHAKEIETTGQIMHRAEG
RKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLG
ENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCR
PQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGI
KKLVNETFQKLWFTPTPHNDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDA
SYKPVKKACTQLVDNLVEHILKYEESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVK
HAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGM
TVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPNSTILTANKPALLR
SLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQ
HPSLMFEQEVKTLYNSILSDKNSSVNLKIQVLKNLQTYLQEEDTRMQQADREWKKVAKQE
DLKEMGDISSGMSSSIMQLYLKQVLEAFFHAQSSVRHFALNVIALTLNQGLIHPVQCVPY
LIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINMCPKNPVRGF
RHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIADNLACFPYQT
QEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKRKERKPSSDEESESDSNSESESESES
EEEVIKPRKLRKRVDSDSDSGEENDINAVMKCLPDNSAPLIEFANVSQGILLLLMLKQHL
KNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKITEDVKRS
IVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAETEDDESDG
EDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARVVQKTSNG
FSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKVVQTLRS
LYAAKDGTSS
NT seq
8493 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtctcaca
gaccttttgaaccagctgcctcttccatcacctttacctgctacaactacaaaaagcctg
ctctttaatggacggatagcagaagaggtaaactgccttctggcctgcagggatgaaaat
ctggtttcccaacttgtacacagcctcaaccaggtgtcaacagatcacatagaattgaaa
gataaccttggcagcgatgatccagagggagatataccagtcttgctgcaggctgtcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagt
ggaatgatgatgccgcagtacaaactttctcagaattccatgcatggtagtcctgcatct
tccaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttatggcacaacagaacagcccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttatacaccacaccct
cagatgcaacaagcttcagtatccagtcccattgtctcaggtgggatgaggaacatacat
gaaaataaagtttcaagtcagttgtctggcaattcagctaatcaccatgctgataattct
agacatggctcaaatgaagactacctacagatggtgcacagactaagtagtgatgatggt
gagtcttcaataaggaatgctgcatcgttttctttgcggtcaccacagtcagtgtgctcg
ccagctggaagcgatggaacacctaaaggatcaagaccacctttaatcgtacaatctcag
cctccaccttattcatcacctagagatgtacccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagttctccttccaaggactccactaaacttacgtta
agactctctcgtgtaagatcttcagatatggaccagcaggacgatatgctttctggtttg
gaaaacagtaatgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccattactccacaggatgttaatcgcccactaaatgctgctcagtgtttg
cctcagcatgaacagacagcattccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcagcaggtttcg
caacaaggaactataacgccatatgatgaagtagagttggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtccaagataaa
gataagcctttgaagaagcgaaaacaagattcttatccacaggaggctgggggtgctact
ggaggaaatagaccagcttctcaggagacaggttctgcaggaaatgggtcaaggccagca
ttgatggttagtattgatcttcagcaagcaggacgagtggactctcaggcaactgtaact
caggactcagacaccatcaaaaagcctgaagaaataaaacagtgtaatgatggatctatt
tttattccccaagaagaccctgttggcgttcttaaatttaaacctgaaaaccatcctgag
acccttaggaaaaagtcagattctgagtgtcaaaaaacagatattcaacaaaatgagagc
aaacagacagaagtgcaacaaaatgaaagcaaatggatggaaagtaaacacaatgagagc
aaacagatagacgctaaacatgaaagtaagcatgacagcagaccaatggatgtgaaacaa
aatgagagcagaccgatggaaacaaaacaaaatgagaatagacagatggacgtgaaacaa
aatgaaagcaaacaaaataatggcaaacaggacataaaacaaaggcccgaaactccaaaa
cagaagaatgaaggtaggcctgaaacaccaaaacagaagaatgaaggtaggcctgaaaca
ccaaaacagaagaatgaaggtaggcccgaaacaccaaaacatagacatgataatagaaga
gattctagtaaaccatcttcagagaagaaacctgaaatatctaaacataaacaggaaatt
aaatctgatccctccagggtaaaatctgaaagtagatcagatccaacaaaacaaagacca
gatggacgttcagttcctgagactccaaggcgtgaccatgagagccttaaacaaaaatct
gaggataggggcgaatcagagagatataagggagatccatccaagatcagaagacctgaa
tatttgagatcctcaagcaaaagtgagcatgactccaaacatgggattaaatctgatagt
tcaaaaactgagaaactagaaagaaaacatagacatgagtctggtgagtcaagagagagg
ttctcttctggggaacaaaaatcaagaccagacagtcctcgtattaaacaggaaagtaaa
ggagattctagtaaatcaagacttgataaacctggttttaaatcacccaacagcaaggat
gaacgaaggacagatggtaataagagtaaagtggatagcaataaaccacacactgacaat
aaggcagagtttcccagttatttgttggggggaagatctggtgcattgaaacattttgtt
attccaaaaatcaagcgtgataaagatggcaatgtcactcaggagccaaggaaaactgaa
attaagggtgaacaaaaggacaaagtggagaagattgggctagtagaagatctaaataaa
ggcgctaagcctgtagttgttctgcaaaagctttctttggatgatgtacaaaaatttatt
aaagacagagaagataaatcaaggagctcttgttttaaacccaacaagaacaagtcatcc
aaatcaaataaaggtagcatagatcagtcagtgttaaaggagttgcctcctgagctcctg
gcagaaattgaatccaccatgccactttgtgaacgtgtgaaaatgaacaagcgcaaacgt
agcacagttaatgagaaaccaaaatatgctgagatcagttctgatgaagacaatgaaagt
gaagaagcttttgaatcatctcggaaaagacataaaaaggacagagatgatgataaagct
tgggagtatgaagagcatgataagagaagttctggtgatcataggagaagcagtcatcac
gaaggaagaaggacttctggtagtagccgttatcgcaatcgtactccagaagactcggac
atggatgattattctcctcctcctcccctcagtgatgtggctaggaaaatgaagaaaaaa
gaaaaacaaaagaaaaggaaggcttatgaacctaaactaacacctgaagaaatgatggat
tcttcaacttttaagaggtttagtgcttcagtagaaaatattttggaaaatctggaagac
atggattttactacatttggtgatgatgatgagattccacaggagttgcttttgggaaaa
catcaacttagtgagttgggtagtgaatctgcaaaaattaaggcaatgggcattatggac
aagctttcaacagataaaacagtgaaagtcctgaacatcttggagaagaatattcaagat
ggctcgaagctttctacattactaaaccataataatgacactgaagatgaggaaagattg
tggagagatctgattatggagagagtcacaaagtctgcagatgcctgtcttaccgctatc
aacattatgacatcacccaatatgcctaaagctgtgtatattgaggatgtaatagaaaga
gtcattcagtacactaaatttcatttgcagaataccctttatcctcagtatgatcctgtc
tacagagtggatcctcatggtggaggtgttttaagttcaaaagcaaagcgtgccaaatgt
tccacccacaagcagagggtcatagtgatgctgtataacaaagtatgtgacattgttagc
agtttggcagaattgcttgagattcagctccttactgacacaactattcttcaggtatcc
tcaatgggaataacacctttttttgtagaaaatgtcagtgagctccagttatgcgccatc
aaactagtgactgcagtgttctcaaggtatgaaaaacataggcagttgattctggaggaa
attttcacgtcacttgcaagactaccaaccagcaaaagaagtttgagaaacttcaggtta
aacagtagtgatactgatggagagcctatgtatattcagatggtaactgcactggttcta
cagcttattcagtgtgttgtgcacctgccatccgtggagaaggattctaattcagaagag
gagtcaaacaaaaaagtggatcaagatgtccttattactaactcatatgaaacagccatg
agaacagcacaaaacttcctttccattttccttaagaaatgtggtagtaaacaaggagaa
gaggattataggccactgtttgagaactttgttcaagatcttctttccacggtcaacaag
ccagaatggcctgctgctgagctgttacttagcttattaggaaggttgttggttcatcaa
ttcagtaacaagtctacagagatggctttgagagtggcatcacttgattatcttggaact
gtagctgcaagattgaggaaagatgcggtcactagcaaaatggatcaaggatccatagct
cgaatattaaaacaggaaaaaagaatgatatgctggtatattgcaggcatcaagagcaac
atgggtggttcagtctcttctcacaagatggagacctctttgctacaagaaacggtttca
ggaggagaagatgaaatccagcagctacaaaaggcattgctagattatttggatgaaaac
acagagactgatgcctcattactgttttctcggaaattttatatagctcaatggttccgt
gacacaactatggagacagagaaagcaatgaaatctcagaaggatgaggattcatctgaa
ggaactcaccatgcaaaagaaattgagacaacaggacaaatcatgcacagagcggaaggt
cgcaaaaaatttcttcgcagtatcattaaaactgcaccctctcagttcagtacattgaag
atgaattctgatactgtggactatgaagatgcttgcttgattgttcgctacttggcctct
atgaggccgtttgcccagagcttcgatatttatttgacacagattctgcgtgtgcttggt
gaaaatgcgattgcagttcgaacaaaagccatgaagtgtttgtctgaggttgttgctgta
gaccccagcattctagccaggttggatatgcaacgaggtgttcacggacggttaatggat
aactccactagtgtacgagaagcagctgtggagttgcttggtcggtttgtgctctgtcga
cctcagcttgctgagcagtattatgacatgctcattgagcgaatactggatactggtatc
agtgtcagaaagagagttataaagattcttagagatatctgcattgaacagccaacattt
cctaaaattacagagatgtgcgtgaaaatgattcgcagagtcaatgatgaagagggcatt
aagaaactggtgaatgagacattccagaaactctggtttactccaactccccacaatgat
aaagaagcaatgacaaggaaaatattaaacatcactgatgtggttgcagcttgtagagat
acaggatatgattggtttgaacaacttcttcaaaatcttttgaagtcagaagaagatgcc
tcgtataaacctgtgaagaaagcctgtactcagcttgttgataatctggttgagcacatt
cttaaatatgaggaatctctagcagactctgacaacaagggtgtgaattctggtcgcttg
gtagcttgcataaccactttgttcttattcagcaaaatcaggccccagctaatggtcaaa
catgccatgaccatgcagccataccttaccactaaatgtagtacacaaaatgatttcatg
gtgatctgcaatgttgcaaaaatcttagagctggtggtgccattgatggagcatccgagt
gagacattccttgccactattgaggaagatctcatgaaacttataatcaaatatggcatg
acggtagtgcagcactgtgtgagctgtcttggggctgttgtaaacaaggttactcaaaat
tataaatttgtatgggcctgttttaatagatactatggtgcactttcaaaattaaaaagt
caacaccaagaagacccaaacagtactatacttacagccaataaaccagcactccttaga
tctcttttcactgttggagcattgtgtcgccattttgattttgatcaggaagattttaaa
ggcaacagtaaggttaacattaaggataaagtacttgaactgctgatgtattttacaaaa
cattcagatgaagaggtacaaacaaaagccattattggtttaggatttgcatttattcaa
cacccaagtctaatgtttgagcaggaggtgaagactctgtacaacagcattctctctgat
aagaacagctcagtaaacttaaaaatccaggtgttaaaaaatctccaaacctatctacag
gaggaggatacgcgtatgcagcaggcagatagagagtggaagaaagtagcaaaacaggag
gatctgaaagaaatgggtgatatttcctcagggatgagcagctccatcatgcaactttat
ctcaaacaggttctcgaggctttctttcatgcacagtccagcgtacgccactttgctcta
aatgtcattgcactgacattaaaccagggtcttatccatccagttcagtgtgtgccatat
ttaattgctatgggcacagatccagagccctctatgcggaacaaagctgaccagcaattg
gtggaaatagacaaaaaatatgctggattcattcatatgaaagcagtggctggtatgaag
atgtcttaccaggtacaacaggcaatcaacatgtgcccaaagaatcccgtaaggggcttt
aggcatgatgaatcctccagcgctttgtgttcacatctatactccatgatcagagggaac
cgtcaacacagacgagcctttctaatttctttactcaacctctttgatgacacagcaaaa
acagaggtgaatatgctcttgtatatagcagacaatctagcgtgttttccttatcaaaca
caggaagagccactgtttataatgcatcatatagacattacactgtcggtttctggtagt
aacctattacagtcatttaaggagtctatggtaaaggacaaaagaaaggagaggaaacct
tcatctgatgaggagagtgaaagtgacagtaatagtgagagtgagagtgaaagtgaaagt
gaagaagaagttatcaagcctcggaagttacgtaaacgtgtagactctgattcagattct
ggtgaagaaaatgatataaatgctgtgatgaaatgtttgccagacaattcagctccttta
attgaatttgcaaatgtctcccaaggcatattgttgcttttgatgctaaaacagcattta
aagaatctttgtggattctctgatagtaaaattcagaaatattctccatccgaatctgca
aaagtatatgataaagcaataaataggaagacaggagtgcatttccatccgaaacagacg
ctagattttctacggagtgatatggctaattccaagatcactgaagatgtgaagaggagt
atagtaaaacaatacttggatttcaagctccttatggaacacttggatcccgatgaagag
gaggaagatggggaggtttcagctagcacaaatgctcgaaacaaagcaattacctcgctg
cttggaggaggcagccctaaaaacaatgcagctgagacagaggacgatgaaagtgatggg
gaggatagaggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagactct
acagagttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatttgc
tgtccaaagtacaaagaccgaccacaaattgcaagagtagtacagaaaaccagcaatggc
ttcagtgttcagtggatggcaggctcctacagtggctcctggactgaggctaagcgccgt
gatggccgcaaactggtgccttgggtagacactattaaagagtcagacattatttacaaa
aaaattgctctaacaagtgctaataagctgactaataaagttgttcagactttacgatcg
ctgtatgccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system
