KEGG   Trachemys scripta elegans (red-eared slider): 117879534
Entry
117879534         CDS       T07347                                 
Symbol
ATG12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst04068  FoxO signaling pathway
tst04136  Autophagy - other
tst04140  Autophagy - animal
tst04621  NOD-like receptor signaling pathway
tst04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:tst00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    117879534 (ATG12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117879534 (ATG12)
   04136 Autophagy - other
    117879534 (ATG12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117879534 (ATG12)
   04622 RIG-I-like receptor signaling pathway
    117879534 (ATG12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tst04131]
    117879534 (ATG12)
   04121 Ubiquitin system [BR:tst04121]
    117879534 (ATG12)
   03029 Mitochondrial biogenesis [BR:tst03029]
    117879534 (ATG12)
Membrane trafficking [BR:tst04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    117879534 (ATG12)
Ubiquitin system [BR:tst04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   117879534 (ATG12)
Mitochondrial biogenesis [BR:tst03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    117879534 (ATG12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 117879534
NCBI-ProteinID: XP_034630675
LinkDB
Position
6:complement(69087223..69093320)
AA seq 142 aa
MAEVEEQLPLSPQDGSRNECGEEPPDRGAVVGVAEPAPPSAGSLVTEEPAEDSKKKIDVL
LKAVGDTPIMKTKKWTVERTRTIQGLVDFIKKFLKLVASEQLFIYVNQSFAPSPDQEVGT
LYECFGSDGKLVLHYCKSQAWG
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggaagtggaggagcagctacctctctctcctcaggacggtagccgaaacgagtgt
ggagaagagcccccggataggggagctgtggtgggggttgccgagccggctcccccttca
gccggctccctggtgaccgaggaacctgccgaggactccaagaagaaaattgacgtcctg
ctgaaggctgtgggggacacgccgatcatgaagaccaagaagtggaccgtggagaggacc
cgcaccatccaggggctcgttgacttcatcaaaaagttcctcaagctggtggcctcggag
cagctgtttatatatgtgaatcagtcctttgctccttctccagaccaggaagtcgggaca
ctctatgagtgttttggaagtgatggcaaacttgtactgcattactgcaaatctcaagcg
tggggatga

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