Trachemys scripta elegans (red-eared slider): 117879638
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Entry
117879638 CDS
T07347
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04060
Cytokine-cytokine receptor interaction
tst04217
Necroptosis
tst04620
Toll-like receptor signaling pathway
tst04621
NOD-like receptor signaling pathway
tst04622
RIG-I-like receptor signaling pathway
tst04623
Cytosolic DNA-sensing pathway
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117879638
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117879638
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117879638
04621 NOD-like receptor signaling pathway
117879638
04622 RIG-I-like receptor signaling pathway
117879638
04623 Cytosolic DNA-sensing pathway
117879638
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117879638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117879638
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Interferons
117879638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Fib_alpha
WXG100
Motif
Other DBs
NCBI-GeneID:
117879638
NCBI-ProteinID:
XP_034630801
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All DBs
Position
6:98548842..98549437
Genome browser
AA seq
190 aa
AA seq
DB search
MISRSLLQFCLMLLFSSEISCLDCNRIYVLQTRMNSESLEHLEKMGGNFPFQCLNERTAF
KPRDILKIRLSQQENAKVAIQQILQELFHIFTNNLTQAAWNGTSIKEFQNGLHQQIEKLE
TCLSAEKGKEITYPGNENLLLTSLKLKRYFQTIDDFLKEKQYSQCAWEIIRVEISRCFLM
LNILTKRLEN
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcaggagtttgctgcaattttgcctcatgctgctcttctccagtgaaatctca
tgtctggactgtaacaggatttatgttctacaaaccagaatgaatagcgagagtttagag
catctggagaaaatgggtggaaactttcccttccaatgtctaaatgaaaggacagctttc
aagcccagagatatcctcaagatccgactgtcccagcaagagaatgccaaggtagccatc
cagcagatcctccaagagctcttccatatctttaccaacaatctcacccaagctgcctgg
aatgggacttccataaaggaattccaaaatggtcttcaccagcagattgagaagctggag
acgtgtttgagtgctgagaagggaaaggagataacctacccaggaaatgagaacctcctg
ctcaccagcctcaaactgaagagatatttccagacaatcgacgatttcctgaaagaaaag
caatacagtcagtgtgcctgggagatcatccgtgtggaaatatccagatgtttcctcatg
ctcaacatactcacaaagagacttgaaaattaa
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