KEGG   Trachemys scripta elegans (red-eared slider): 117879641
Entry
117879641         CDS       T07347                                 
Name
(RefSeq) interferon beta-like
  KO
K05414  interferon alpha
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst04060  Cytokine-cytokine receptor interaction
tst04217  Necroptosis
tst04620  Toll-like receptor signaling pathway
tst04621  NOD-like receptor signaling pathway
tst04622  RIG-I-like receptor signaling pathway
tst04623  Cytosolic DNA-sensing pathway
tst05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tst00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117879641
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    117879641
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117879641
   04621 NOD-like receptor signaling pathway
    117879641
   04622 RIG-I-like receptor signaling pathway
    117879641
   04623 Cytosolic DNA-sensing pathway
    117879641
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117879641
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:tst04052]
    117879641
Cytokines and neuropeptides [BR:tst04052]
 Cytokines
  Interferons
   117879641
SSDB
Motif
Pfam: Interferon AD FRB_dom
Other DBs
NCBI-GeneID: 117879641
NCBI-ProteinID: XP_034630804
LinkDB
Position
6:98579627..98580193
AA seq 188 aa
MTTRSFLHICLVLLFTENSSVDCNMLHFQQNKVNQASLQLLEKMGGQFPVQCLNENSNFI
SFQNVLSSREFQKENAMVAIQEILQQIFNIFSKSHIQTAWDRSSIVAFQNGLHQQIELLK
TWFDGEKKMETTYPQNEDFTRLKVKKYFHVVDNFLKEKQYSLCAWEIIREEMRRCFLIMD
QLTKRLKN
NT seq 567 nt   +upstreamnt  +downstreamnt
atgaccacccggagtttcctacacatttgccttgtcctgctcttcaccgaaaactcatct
gtggactgtaacatgcttcacttccagcaaaacaaagtgaaccaagctagtttacagctt
ctggaaaaaatgggaggacaatttcctgtgcaatgtctaaatgaaaattcaaacttcata
tccttccagaatgttctcagctccagagagttccagaaggagaatgccatggtggcaatc
caggagatcctccaacagatcttcaatatcttcagcaaaagtcacatccaaactgcctgg
gataggagttccatagttgcattccaaaatggacttcaccagcaaattgagctgctgaag
acatggttcgatggagaaaaaaagatggagacaacctacccacaaaatgaggacttcacc
aggctgaaagtgaagaaatatttccatgtggtagacaatttcctgaaagaaaagcaatac
agcctgtgtgcctgggagatcatccgtgaggaaatgagaagatgttttctgattatggac
caactcacaaaaaggcttaaaaattaa

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