KEGG   Trachemys scripta elegans (red-eared slider): 117879658
Entry
117879658         CDS       T07347                                 
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
  KO
K21988  transmembrane channel-like protein
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:tst00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    117879658 (TMC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tst02000]
    117879658 (TMC1)
   03037 Cilium and associated proteins [BR:tst03037]
    117879658 (TMC1)
Transporters [BR:tst02000]
 Other transporters
  Pores ion channels [TC:1]
   117879658 (TMC1)
Cilium and associated proteins [BR:tst03037]
 Other cilia and associated proteins
  Stereociliary proteins
   117879658 (TMC1)
SSDB
Motif
Pfam: TMC Piezo_TM1-24 COX16
Other DBs
NCBI-GeneID: 117879658
NCBI-ProteinID: XP_034630822
LinkDB
Position
6:92982307..93061610
AA seq 955 aa
MPRHEKPTTVESAVGIEVDNEEGSAAESEDDDSKIDEEESEKEKKVTAKTRRGNARGRAR
KDSEEEEETRTAGQRRQRNRRAQRKQAGNEDSDSDEESCKNKKNRANQISKQQEPNEDGE
DDNKGGRKGRGKNETKQEKKPDEKGKKEKDNKKKKDKKKKGSSSSDSDSEEEPITEEELA
KLKEEVEEKKKLIATLRNKPWQMKKKLDVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMT
KKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLV
MVPEVLMGKPYGTLPRKTVPRAEERTAMNFATLWDFSGLAQYSVLFYGYYNNQRTIGWLK
FRMPLSYFLVGVGTIAYSYMVVIRTMARNANEEGGGDDTSFNFSWKMFTSWDYLIGNPET
ADNKFASITTSFKEAIVEEQENRKEENIHLTRFLRVLANFLALCTLAGSGYLIYFVVRRS
QKFALEGLDNYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALF
LGNLYTFIIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENATAPPIQVDPADVPRG
PCWETMVGQEFVRLTISDTMTTYITIIIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDI
SGNVLGLIFNQGMIWMGSFYAPGLPAINVFRLHTSMYLQCWAVMCCNVPHERVFKASRSN
NFYMAMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLENDFPSWFGKVF
SYASNPGLILPFILLMVLSIYYLNATSKTYKEANLDLKKKLQSQAEENKKRNKQKAQQSR
EMEENSLETKPKQQGSKQDSAADQGTQKGQGDKESKKKTSHQHEASPSQQHSPGPNVHYS
SHGRGGSLTPPPHIAVTRPPVPRGYGMPGYPPRNPRFEGFPGGHPRMPRGTPNYR
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgcctagacatgaaaagccaaccaccgttgagagtgctgtgggcattgaagttgacaat
gaagaaggcagcgcagctgagagcgaagatgacgacagcaaaatagatgaagaagaatct
gaaaaagagaagaaagtaactgccaaaaccagaagaggaaatgccagagggagagccaga
aaggattcggaggaggaagaggagacgaggacagctgggcaacgcagacagagaaacagg
agagcacagaggaaacaggctgggaatgaggacagtgattctgatgaggaatcctgcaaa
aacaagaagaacagggcaaatcagatatccaagcagcaggagcccaatgaggatggagaa
gatgacaataaagggggcagaaaaggaagaggcaaaaatgagaccaaacaggaaaaaaaa
cccgatgagaaagggaaaaaggagaaggacaacaagaaaaagaaggataaaaagaagaaa
ggttcctcaagctctgactccgactctgaagaggagccaattacggaggaggaattggcc
aagctgaaggaagaggttgaagagaaaaagaaactaattgccacattacgaaacaaacca
tggcagatgaaaaagaaactagacgtcctgaaggaagcccagctttttgtagaaaaattt
gaaggtgcacttggaaaaggaaaagggaaaaagttttatgcatacaaagtgatgatgaca
aagaaatggatgaaatttcaacgagattttgagaattttaaaacagcctgcataccatgg
gaaatgaaaatcaaagagattgaaagtcattttggctcttcagtagcttcttatttcata
ttcttgcgctggatgtatggaataaatatgattctcttcggattgacatttggccttgta
atggtgcctgaggtgctgatggggaaaccatatggcacgttacctagaaaaactgtcccg
agagctgaagaaagaactgctatgaattttgcaactttgtgggactttagtggccttgca
cagtattctgtgctcttttatggctattacaacaaccagagaacaattggctggctgaag
ttcaggatgcctctttcctatttccttgtgggagttgggaccattgcctatagctacatg
gttgtcatccgaacaatggcaaggaatgcaaatgaggaaggtggtggggatgatacaagt
tttaatttcagctggaaaatgttcactagctgggattacctgatcggcaatcctgaaaca
gcagataataaatttgcttcaatcacaacaagctttaaggaagctattgtggaggagcag
gagaaccgaaaagaagaaaacattcacctaacccgattcctgagagttcttgctaacttc
ctggccctgtgcacactggccgggagtggttacctcatctattttgttgtgaggagatcc
cagaagtttgccctggagggcctggataactatggctggtgggagagaaatgaagtgaac
atggtcatgtctctcttgggaatgttctgtccaactttatttgatgtaatcagttctctg
gaaaattaccaccctcgaatagctctgagatggcagctggggcgcatctttgctctcttc
ttgggcaatctatacacattcatcattgccctgatggatgagatcaatctcaagctggaa
gaagagaagatagtgaagtataacatgacaatatgggaagccagcctctacaatggtacg
ataccagaaaatgccactgctcctccaatacaggtggatcctgcagacgtccctagaggg
ccatgttgggaaacaatggtagggcaggagtttgtgcgactgacaatctctgacactatg
acaacatacatcacaattataattggagatttcctgagagccgtctttgtcaggtttttc
aattactgctggtgctgggacttggagtatggatttccttcatattcagagtttgatata
agtggaaatgtgctgggactgatctttaaccaaggcatgatctggatgggttctttttac
gctccaggcctgccagctatcaatgtgtttcgtctccacacctcgatgtatctgcaatgc
tgggctgtgatgtgctgcaatgtcccacatgagagggtcttcaaagcctctagatccaat
aacttctacatggccatgctgctctttattctcttcctctccactctgcctgccgtgtac
actattgtctctattccaccgtcctttgactgcggcccattcagtgggaaaactagaatg
tttgaggtcatttcagaaaccttagagaatgacttcccttcctggtttgggaaagtattt
agttatgcttctaaccctggactgatcttgcccttcatattgcttatggtattgagtatc
tattatctcaatgctacatccaaaacctacaaggaagctaacttggatctcaaaaagaag
ctacaaagtcaagctgaggaaaacaaaaagagaaacaaacaaaaagcacaacagtcacgg
gagatggaagaaaactcccttgagactaaacccaagcagcaaggaagcaaacaagactcc
gcagcagatcaaggtacccagaaaggacaaggtgacaaagagtctaagaaaaagaccagc
caccaacacgaagcaagcccctctcagcagcacagccctggcccaaatgttcattattcc
tcgcatggcagaggaggaagccttactccacccccacacatagctgtgactcgaccacca
gtgccaagaggatatggcatgcccggctacccccccagaaatccacgctttgaaggtttt
cctggaggacacccaagaatgccaaggggcactcctaactatagataa

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