KEGG   Trachemys scripta elegans (red-eared slider): 117879737
Entry
117879737         CDS       T07347                                 
Name
(RefSeq) DNA repair protein complementing XP-G cells-like
  KO
K10846  DNA excision repair protein ERCC-5
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    117879737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tst03400]
    117879737
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117879737
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 117879737
NCBI-ProteinID: XP_034630914
LinkDB
Position
1:complement(246362610..246430970)
AA seq 1665 aa
MPNIAEGERENGSGHKENRPEKKSSEATLHNDVKPYCTSDASAVSLGPTGDGHYPWGCPV
THTREKIYTICSDYAFLNQVTSVRKSPSATVNACLSDSAALNVGNNTPNFIGIQSGASEI
IYNEDTNLENLSSSLGKLPLAWEIDKSEFNGVTPNLKNRAGNMKKQATKKKSLDKKSKQY
RECSQHSTVEEIKQRKVLDLRRWYCISRPQYKTSCGISSLVSCWNYLYSTLGAGNLPPIT
QEEALHILGFQPPFEEIRFGPFTGNTTLMRWFRQINDHFHVKGCSYVLYKPHGKNKTAGE
TAAGALVKLTQGLKDESMAYIYHCQNHYFCPIGFEATPVKASKAYRGHLLQQEVEYWILI
GELSRKHPTIHCKKWVDIVTDLNTQNPEYLDIRHLERGLQYRKTKKVGGNLHCIIAFQRL
NWQRFGPWNFPFGNIRRDIQPQAQGIAKSESEDNITKKQHGHLGRSFSAGFHQEPMWKKM
YNLHERRNSGYQSYTDYDGNDRARNEQLEEEVQHQQIRGRTMGVQGLWKLLECSGRPINP
ETLEGKILAVDISIWLNQAVKGARDRYGNTIQNAHLLTLFHRLCKLLFFRIRPVFVFDGE
APLLKRQTLAKRRQRKELAVSDSKKTTEKLLKTFLKRQAIKTALTGKSNEALPSISQVRR
EEIDDMYVLSSLQEEEKKSSEDEDEKEWEERMSQKKILQEEFFDNPHSVDIESEDFSSLP
PEVKHEILTDIKEFTKRRRTLFETMPEESNDFSQYQLKGLLKKNNLNRYIENVEKEMSQQ
DSGHIQTQYENEGGFMKEVESKRVVSEDTSHYILIKGIQVKEATSTHLETLSVGHSSTRP
KYNIPDKIHNEMNASTKPPSPEKLKTEKAINAVGAPPSPRTLLAIQAAMLESSSEEEPED
EDKRQLNLDQATLCPGIVEGNVSPRTLQAVQQALCGGGDDVRAVITTSADRTRMEMSGVK
DLISSSDEEDEVPKIKDGKEPLLLPTILSTNTVLMQDGESDQKSQSDFFLIPVPKGVCTP
CVKNDSSVEIIRLDKEETEDEQDTAKMDSSSLQENMNICMQKPISSKTQTTSVALIHAET
TEISSNGESENVEYVLSKAEKNTSELQHSLSVTPEIANPNEARVQRKSQSEESDSDGSFI
EVDSEISNDTEFPGEILKTSHAPSEPDETLAIEAAATELEKEGDDGATENLLKDAAEEVQ
LTIHQNTETEKDREDAVNEWQDISLEELEALENNLSVEQNMLQAQKQQQERIAATVTGQM
FLETQELLRLFGVPYIEAPMEAEAQCAVLDLTDQTSGTITDDSDIWLFGARHVYKNFFSQ
NKYVEYYQYVDIQNQLGLDRSKLINLAYLLGSDYTEGIPSVGYVTAMEILNEFPGPGMEP
LLKFTEWWTEAQKNKKIRPNPHDTKVKKKLQQLQLSPGFPNPAVVKAYLKPVVDESKGSF
IWGRPDVEQIREFCQNCFGWTRTKTDEALLPVLKQLNSQQTQLRIDSFFRLAQHEKQAIK
SQRLRRAVTCMRRKEKEAAADEATAVVEREFKHGEKTKGKIAVQGTTDRATAAQSQRVKR
KKHSKSKEESFHGGGFIGEVQLSEASSGSSGEDSESEVLSKSKRGKIVKESAVQKNTVRQ
EEDMNSSSSGEDGDEENTVMVTARSVFEGKKGKSWHTRGRKKKKC
NT seq 4998 nt   +upstreamnt  +downstreamnt
atgcctaacattgcagaaggtgaaagggagaatggttctggacacaaagaaaacagacct
gaaaagaaatcttcagaagctactcttcataatgatgtaaagccatattgcacttcagat
gcatccgctgtgtcactgggtcctactggagatgggcattatccatggggatgtcctgtg
actcacacccgagaaaaaatttataccatctgctcagactatgcttttttaaaccaggta
acgtccgttcgtaaaagtccaagtgctacagttaatgcctgcctatcagatagtgctgcc
ttaaatgttggaaataatacacctaacttcattggcattcaaagtggagcttctgagata
atctacaatgaagacactaacttggaaaatttatctagtagtcttggaaagcttccactg
gcctgggaaattgacaaatcagagttcaatggagtgaccccaaatctgaaaaacagagca
ggaaacatgaagaaacaagcaacaaagaaaaaatctttggacaaaaaaagcaaacaatac
agggagtgttctcaacattccactgttgaagaaataaagcagcggaaagtgctcgacctc
aggagatggtactgtattagccgaccacaatataagacttcctgtggaatttcctctcta
gtatcttgctggaattacttatatagcacactgggagctggaaacctaccacctattact
caagaagaagccttgcatattttgggctttcaacccccatttgaggaaattaggtttggt
ccctttacaggaaatacaactttaatgaggtggtttagacagattaatgatcatttccat
gtaaaaggctgttcatatgttctatataaacctcatgggaagaacaagacagccggagaa
actgctgcaggggccttggtaaagttaacacaaggactgaaagatgagtcgatggcctat
atttatcattgccaaaatcattatttttgtccaattggatttgaagctacccctgtaaaa
gctagtaaagcatacagaggtcacctcttgcaacaagaagtggaatattggatcttaatt
ggagaactaagtagaaaacaccctaccattcactgtaaaaagtgggtagatattgttact
gacctgaacactcaaaatccagaatacttagatattcgacacctggagaggggtctgcag
tatagaaaaacaaagaaggtaggaggaaacctgcattgtatcattgcttttcagagactt
aactggcaaaggtttggtccttggaacttcccatttggaaacattagacgagatatacaa
ccacaagcacagggaattgccaaatctgaaagcgaagacaatatcaccaagaaacagcat
ggacatctgggtagatctttcagtgctggtttccatcaagagcccatgtggaagaagatg
tataatcttcatgagaggaggaacagtggatatcagagttatactgattatgatgggaat
gatagggccaggaatgagcagctggaggaggaagtgcaacatcagcagataagaggaaga
acaatgggagttcaaggactttggaaactgcttgaatgctctggaagacctataaaccca
gaaactttggaaggaaaaattcttgctgttgatattagcatttggttgaatcaagcggta
aaaggagcaagggaccgttatggtaacaccatacaaaatgctcacctactcactttgttc
catcgactctgcaagttgttattttttcgaatccggcctgtcttcgtttttgatggagag
gcaccactactgaagaggcaaactttggctaaacgaagacaaagaaaagaattggcagtc
agtgactctaagaaaactaccgaaaaactcttgaaaactttcctgaaaagacaggctatc
aaaacggctttaacaggcaaaagcaatgaagcactgcccagcatttcacaagttcgaaga
gaagaaattgatgatatgtatgtattgtcttctttacaagaggaagaaaaaaagagttca
gaagacgaggacgaaaaagagtgggaagagagaatgagccaaaaaaaaatattgcaggaa
gaattctttgacaatcctcattctgtagacattgaatcagaagacttcagcagtctgcct
ccagaagtgaaacatgaaatcctaacggacataaaggagtttacaaagcgacgaagaaca
ttatttgagacaatgccagaggagtccaatgacttctcacaataccaacttaagggtttg
ctaaaaaaaaacaacctcaatcgatacatagaaaatgtggaaaaagagatgagtcagcag
gactcaggccatatccaaacccaatatgaaaatgaggggggcttcatgaaagaagtggaa
agcaagagggtagtctctgaagatacttctcactacattctgataaaaggtattcaagta
aaggaagccaccagtacacacttagaaactctttcagttgggcattcttccacaagacct
aaatataatatacctgataaaatacataatgaaatgaatgctagtaccaaaccaccttca
cctgaaaagttaaagacagagaaggctatcaatgcagttggagcaccaccttctcccaga
actttgcttgctatacaggcagctatgttagaaagcagctcagaagaggagccagaggat
gaagataaaaggcagctgaatttggaccaagccactctctgccccggtatagttgaaggc
aatgtatcaccaagaacactacaggctgttcagcaagctctatgtggtggtggtgatgat
gtcagagcagttattaccactagtgctgatagaacacgaatggagatgtcaggggtgaag
gatcttattagtagttcagatgaggaagatgaggttcctaaaattaaggatggaaaggag
ccactacttttacctacaattctttcgacaaacacagtccttatgcaagatggtgaatca
gaccaaaaaagtcagtcagatttttttctaattcctgtacctaaaggtgtgtgcacacct
tgtgttaaaaatgactcctccgttgaaatcattagactagataaagaagagacagaagac
gaacaagacactgcaaaaatggactcaagttctctgcaagaaaatatgaatatttgcatg
cagaaaccaataagttccaaaacacagaccacttcagtagctctgattcacgcagaaact
acagaaatttccagcaacggggaatctgaaaatgtagagtatgttttatcaaaagcagaa
aagaatacttctgagctacagcattcactttcagttactccagaaatagcaaatcctaat
gaggcaagagtgcaaaggaaatcacagtctgaagagagtgattcagatggtagctttatt
gaagtggacagtgaaattagtaatgacactgagtttccaggtgaaatacttaaaacatca
catgctccctctgaacctgatgagacattggctattgaagcagcagctacagaactggag
aaggaaggagatgatggtgccacagagaacctccttaaagatgctgctgaagaagtgcag
ttgactattcatcagaatactgaaaccgaaaaagaccgggaagatgcagtgaatgagtgg
caagatattagtttggaggaattggaagctttggagaacaacctttctgttgagcaaaac
atgctccaggctcaaaaacaacagcaagagcgtattgctgccactgtaaccggacagatg
ttcttggaaactcaggaacttctccgtctgtttggtgttccttacattgaagcacctatg
gaggcagaggctcaatgtgctgtcttggatcttactgatcagacatctgggacaatcact
gacgatagtgatatttggctatttggagcacggcatgtttataaaaatttcttcagtcaa
aacaagtatgtggaatattaccaatatgtggatattcaaaaccaactagggttagacaga
agcaagttaattaatttggcctatttgcttggaagtgactacactgaaggaatcccatct
gttggctatgtaacagcaatggagattttaaatgaattccctgggcctggaatggaacct
ctcttaaaattcactgaatggtggactgaagctcagaagaataagaaaataagacccaat
ccacatgataccaaagtaaagaaaaaactgcagcaactgcagctgagtcctggcttccca
aatccagcagtagtaaaagcttacctgaaacctgtggtggatgagtcaaaggggtcattc
atctggggaaggcctgatgtagaacagatcagagaattctgtcagaattgctttggctgg
actaggacaaagaccgatgaagcccttttgcctgtacttaaacagctgaactcacaacag
actcaacttcgaattgattcattcttcagactagcacaacatgaaaaacaagccattaag
agccagagacttcgaagagctgtgacttgtatgcggaggaaagaaaaagaagcagcagct
gatgaggctactgctgttgtagaaagagaatttaaacacggtgagaaaactaaaggaaaa
atagctgtccaaggcacaacggatcgagctactgcagcacaaagccaaagggtaaagagg
aaaaaacattcaaagtctaaagaggagagtttccatggaggcggtttcattggtgaggtg
cagctgtcagaagcatccagtgggtcttcaggagaggattctgaaagcgaagttttaagt
aagagcaaaagaggaaaaattgtcaaggaatcagcagttcagaaaaacacagtgagacag
gaggaagacatgaatagtagctcaagtggtgaggatggggatgaagaaaacacagtcatg
gtgactgcccggtctgtgtttgagggcaaaaaggggaaatcatggcatacgagaggaaga
aaaaagaaaaagtgctaa

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