Trachemys scripta elegans (red-eared slider): 117879750
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Entry
117879750 CDS
T07347
Symbol
FANCD2
Name
(RefSeq) Fanconi anemia group D2 protein isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117879750 (FANCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117879750 (FANCD2)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
117879750 (FANCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
117879750
NCBI-ProteinID:
XP_034630900
LinkDB
All DBs
Position
7:52553122..52769939
Genome browser
AA seq
1453 aa
AA seq
DB search
MVSKRKLSKSDAHGDSLIAELPQTKKSRISCKEKTSAEVGVVENNNIFVQLIKSAGITLN
AGERQNDIAVDQATFQKKLCQILRKHPFYPRIVQEFVSGLETHIKDRDQFRNCLLPCAPV
RGEGMRNLVHSYCESLIKLLLGIETLQPAIITVLLEKLPEFFFDTVGTFGTNFPRLIVNQ
FKWLDKILDSKDLVMKLMQMVSVSPAPIQHDIITSLPEILEDSQQSEVAREVSQLLKRDN
RLTVPILDALSSLDLDAGLLAEVRQSAMIIVPAVKLEDLPVVIKFILHNIKAVDAVEVIS
ALRKNLDLSSCILPLQMLSSQSKLKSQPQTSSSTSQVSSSQNCVKLLFDVIKSAVRFQKG
ISEAWIKAIENTVCVSDHKVLDLIVLLLIHTTNTKSRKQIERVLRNKIPLGCVPEQLLQS
AFRNHSLVIKDYFPSILSLAQTFLHSADPCVVSFGSCMYKQAFAAFDSYCQQEVVSALVT
HVCGGNDVEMDISLDVLTDLVTLHTSSLIRYATFVKNILDYTEKLNPQQIRKLFYILGEL
AFSQRQEDSYIQDDMHMVIRKWLSSTVPKYKQMGIIGAITVAGSMAAKRRKEDGCSLERT
QQSEEHCRQLSILLDLVSYCCEQSPEALALYYDELANLIEKQKGNLDSQILERIGKSVVE
DFSNDFVVDLTPAVDGVHLFPVKSLYNLDEDESQGTIVINLLPLLSQNWLGKSVDENTTR
NQGKKIVSPECLSPSFRLLRLYTTEQHNGSMEEIDALLGCPLHLTDLEIEGKLDSLAKQE
REFLCSLLFHSLNWFREVVNAFCQQQDLEMKGKVLTRLQNITELQNMLGKCLAASPGYVP
PRAIFDCEALEAAPTINAVGLVKKKKTGEKKQKSEGSKDSSADHSQMEENPEGNQPEAET
TQLEKVLLDTTEKKSGIPLVQLQSYHAFFRELDLEVFTILHCGLLTKSILDSEMHTEARE
IVQLGPAELVFLLDDLCQKLEHILIPPAAKRAPFLKQGKACRKIGFSHLCQRSSQEVAQC
AVELLKPLCNHMENMHNYFQALMTENQGVVDGPRVDIQEHQLMSSCYQQLLQAFRFLFAW
SGFSQRENSDLLRSALKVLADRLKPGETGFLLLEDLISESFHYLLNFQHSVPNFQCALTL
TQLLIVIAEKPVASWKKDKIASLAKQFLCQSWMQLSGTREKGSQFSDALHTLLCVYMEHT
DNILKAVEDISSVGVPELINSANDGYSSTYPTLTRQTFPVFFQVMMAQLENSARSISAGK
PSDSSEVQLEKLLHWNMTVRDFHILVNLVKVFDSRPVLSICLKYGRLFVEAFLKLAMPLL
DYSFKKHREDVQSLLKTLQLSTRQLHHMCGHSKIHQDLGLTNHVPLLKKSLEQFVYRVKA
MLAFNHCQEAFWVGILKNRDLQGEEILSQDSEENDPGEGVSQLPREDPAEGEGDISGSEG
GSKHNDDDEESSE
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaaacgaaagttgtccaaatctgatgctcatggggacagtctgattgcagaa
ttaccacaaacaaagaagtctcggatctcttgcaaggagaagacctctgccgaagttgga
gtggtggagaataataacatctttgtacagctcatcaaatcagcaggaattactctgaat
gctggggagagacagaatgacatagccgttgatcaagcaaccttccagaagaaactctgc
cagatcttgaggaagcatcctttctacccacgtattgtgcaggagtttgtcagtggcttg
gagactcacattaaggacagagaccagttcaggaactgccttctgccttgtgctccagtg
cgaggcgagggtatgagaaatttggttcattcatactgtgaaagccttattaaactacta
cttggaattgagactttacagcctgctattataacagtgttattggagaagctccctgaa
ttcttttttgacactgtgggcacctttggaaccaatttcccccggcttattgtcaatcag
tttaaatggctggacaaaatacttgacagcaaagatctcgtcatgaaattaatgcagatg
gttagtgtttctccggcgccaatccagcatgacattattaccagcttgccagagatcctg
gaggattcccagcaaagtgaagttgccagagaggttagccagctgttaaaacgggacaat
cgcctaactgttccgatcctggatgccctttccagtttggatcttgacgcaggacttttg
gctgaggtgcggcagtctgctatgatcattgtgcctgctgtaaaattggaagatttgcct
gtagtaatcaaattcattctacataacatcaaagctgtggatgcagtagaggtgatttct
gcccttcgcaagaacttggatctgtcgtcatgtattttacctctgcagatgctgtcttct
cagagcaagctcaaaagccagccacaaacgagttcctccacaagccaagtaagcagcagc
cagaactgtgtcaagctcctttttgatgtgataaagtcggctgtgagatttcagaaaggc
atttctgaagcttggattaaggctattgagaacactgtctgtgtgtctgaccataaggtt
ctggacctgatagttctgctgctaatccatactacaaacaccaagagcaggaagcaaatt
gagagagtgctgaggaacaagattccactgggctgtgtgccagagcagctgctacagagc
gccttccgaaatcactcattggttatcaaagactacttcccatcaatcctgtcactggct
cagacctttctgcactctgctgatccatgtgtcgtctcctttggcagctgcatgtacaag
caagcatttgcagcctttgactcttactgtcagcaggaagttgtgagtgcattggtgact
cacgtttgcggtggaaatgatgtagaaatggacatttctctggatgtgctcactgacctg
gtgactctgcatacctcctcattgatacgctatgccacctttgtgaagaacattttagac
tatacggagaaactgaatccacagcaaattcggaaactcttctacattcttggcgagttg
gcattcagccagaggcaggaagacagctatattcaggacgatatgcatatggtgatcagg
aagtggctgtctagcactgttccaaagtataaacaaatggggattattggtgctattacc
gtggcaggcagcatggcagcaaagagacgtaaagaagacgggtgttcattggagagaacg
cagcaaagtgaagagcactgcagacagctctccatcttgctcgatctggtgagctactgc
tgtgagcaaagtcctgaggccttggctctgtattatgatgaacttgccaacttgattgag
aaacagaaagggaatttggattcacaaattctggaacggattgggaagagtgtggtggag
gacttttccaatgactttgttgtagatctcactcctgcagttgatggtgttcacctgttc
ccagtgaagtccttgtataacctggatgaagatgagagtcagggaacaattgttatcaac
ctattgccactgctgtcacagaactggcttggcaagagtgttgatgaaaatacaactagg
aaccagggtaaaaagatagtgtctccagagtgtctgtctccctctttccgattgctgagg
ctttacacgacggagcaacacaatgggagcatggaggagatcgatgccttgctaggctgt
cccctacacctgactgacttggagatagaagggaagttggactccttagccaagcaggaa
agggaattcctgtgctcgctcttattccattcacttaattggttccgtgaggtcgtgaat
gccttctgtcagcaacaggaccttgagatgaaagggaaagttttgactcgattacagaac
atcactgagctacagaacatgctcggaaagtgcttagcagcaagccctggttatgtacct
ccccgcgctatcttcgactgtgaagccctggaagcagcaccaactatcaatgctgttggt
ctagttaaaaagaagaaaacaggagaaaaaaaacaaaaatccgaaggcagcaaagactcc
tctgcagaccactcacaaatggaggagaatcctgagggaaatcagcctgaagctgagacc
acacagctagagaaggtgctattggacaccactgaaaaaaagtcagggatccctttggtg
cagctgcagagttaccatgcattcttccgagagctagaccttgaggtgttcaccatcctg
cactgtgggctgctgaccaaatctattttggactcggagatgcacacagaggccagagaa
attgtacagttagggccagcagagcttgtgttccttctggatgatctttgccaaaagctg
gagcacatactgataccacctgctgcaaagagagcccctttcttaaagcaggggaaagcc
tgtaggaagattggattctcccatctatgtcagagatcgtctcaagaagttgcccagtgt
gcagttgagttgctgaaaccactgtgtaatcatatggagaacatgcacaattacttccag
gcactaatgacagaaaaccagggagtggtggatggaccaagagtggacattcaggagcac
cagcttatgtcttcttgttaccagcagctgctgcaggcctttcgctttctgtttgcttgg
agtggattttctcaacgtgaaaatagtgacttgctgaggtcagccctcaaggtccttgca
gacagactaaagcctggagagacaggatttcttcttcttgaggacctaatcagcgagagt
tttcactacttgctgaatttccagcacagcgttcccaatttccagtgtgcactcaccctc
actcagctcctgattgtcattgctgaaaaacctgtggccagctggaaaaaagataaaata
gcttcacttgctaaacagttcctctgccagtcatggatgcagctcagtggcacgcgagag
aagggtagccagttcagtgatgcgctgcacactttgctctgtgtatatatggagcacaca
gacaacatcttgaaagctgtggaagacatctccagtgttggggtcccagagctgattaat
tctgctaatgatggatattcttctacttaccccacgctgaccaggcagacatttccggtt
ttcttccaagtgatgatggctcagctggagaattcagcgagaagcatttctgctgggaaa
ccatcggactcaagtgaggtacagctagagaagctgctgcactggaacatgactgtgcgg
gatttccatattcttgttaacttggtcaaggtgtttgacagcaggcccgtgctcagcatc
tgcctgaagtacggccgcctctttgtggaagccttcctgaagcttgccatgcctctcttg
gattatagctttaaaaagcacagggaagacgtgcagagtttgctgaaaactttacagctg
agcaccagacaacttcatcacatgtgtggccattcaaagattcaccaagacctaggattg
accaaccatgtgcctttattgaaaaagtccctggagcaatttgtataccgagtaaaagcc
atgttggccttcaaccactgccaggaagcattctgggtgggcatcctcaaaaacagggac
ctgcagggagaagagatcctgtctcaggattctgaagagaatgacccaggggagggagtt
tcccagctccccagagaagatcctgctgagggggaaggtgacatttcagggagcgagggt
ggatccaagcacaatgatgatgatgaagagagttctgagtag
DBGET
integrated database retrieval system
