Trachemys scripta elegans (red-eared slider): 117879754
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Entry
117879754 CDS
T07347
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117879754 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
117879754 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_NISCH_C
PX
LRR_4
LRR_8
LRR_9
PH_PLEKHM2
LRR_NXF1-5
PH_S11IP_C
Motif
Other DBs
NCBI-GeneID:
117879754
NCBI-ProteinID:
XP_034630909
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All DBs
Position
7:complement(43989926..44047365)
Genome browser
AA seq
1425 aa
AA seq
DB search
MEAVGTGEEGEEPPKEARILGSELVESYTVYIIQVSVGSHQWTVKHRYSDFHDLHEKLVS
EKKIDKNLLPPKKIIGKNSKSLVEKREKELEVYLQTLLVKFPIAAPKLLSHFLHFNLYEI
NGITAALAEELFHRGEQLLMAGEVFSLRPLQLYAITQQLRQGKPTCANGDAKTDLGHILD
FTCRLKYLKVTGTEGPFGTSNIQEHLLPFDLSIFKSLHQIEINHCGANLIKGLTSSKHTL
TTMSIRFSATSMKEILVPEASEFDQWEPEGALSSFPVTAVIPTWKTLTTLDMSHNRIFQI
DDSVKLIPKIEFLELSHNDVSLVENLQHLYNLIHLDLSYNKLASLEGVHTKLGNIKTLNL
AGNLLERLCGLNKLYSLVNLDLSSNKIDQIDEIRNIGSLPCLEKVVLSNNPLSIIPDYRT
KVLAQFGDRASEVCLDNISTTEKELDTVEVLKAIQKAKEVKYKLNNSDKKISEDSRLTAA
SSKSNCSSLTVHPSSSSLPRPVSSSQEIVCRKTALASSLSPSSSSTPTDHTVTQRCSEIL
DSRYRNQVPTSLLDLSKEYGRGHHICLDHSDEEHGALPDPCNTIILPFTCMSYTATNQDF
IQHLSTLIAQALQRSPPSSTEIENKGSPVNDSSVTDNEDGYFEMGLGDRTFEFSATSDIA
PPAPDSTRAEGIDIVKVLWSFSIQVHKGGGARQFASCLVLTDSVVAVFEIPHQDSKGNCQ
HIPAALKLALCFPYTDLTEFGFLMPEICLTLKVRNNDNCLFVVSDSQNLQDFYSCLQTCC
SQSCTSLFSSSTLYCGKASLQEFVYQLMGFYHISPDGMEIKGCFPTYLVYSNKTDVQKAL
RLPESVDDNRAWSDHALCSALYSTLYKSAEQSHYAFHPCWIFLTPQHLHIVKVDFNVMPA
KCIDSEDARNVFKLSRIPLASVVLHPTNHPIQQKGSFSDGHVLELLIGHKFVTAVFVLPH
EKFHFLRIYSLLRTLLQDVKTIVILKASNSLEPVKNHLLDSKNRHGQTAGFCKPCLTLSS
LYPSEFLMQKITEDNQIPAYLPISSSLQYVAGLKGNAIVEFFHNSVAEVENEELRHFMWS
SVLFYKTPDTEVTACVMLSTKAIYFLLDDSVTHTNEHQLDFWNQENSDCENSSFHLSCCF
VLKLNDLQSVNVGLFDQYFRITGHSADHIVTCLTRDSYSTHAFIQHLMAVLSLLARTPSP
EPVDKDFYSEFGNKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMYSLANLQSL
NILLYVLAFQVNHTEETAQANSSLQPKTLILTSSDLFLFNEDYISYPLPEFAKEPPKKDK
YQLIDGRRIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGDTFSAPKLNAKH
KGSGNGEIQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggtggggaccggggaggagggtgaggagccgcccaaggaggcccggatactc
ggctccgagctggtggagagctacacggtatacattattcaagtcagtgttgggagtcat
cagtggacagtcaaacatcgttacagtgacttccatgacttgcatgaaaagcttgtttca
gaaaagaagatagataaaaacctgctgcctccaaagaagattattgggaaaaattccaaa
agtctggtggagaaaagagagaaggaattagaagtttacctgcaaacgcttctggtcaag
ttccccattgctgcacccaaattgttgtcacacttcttacactttaatttatatgaaatc
aatgggatcacagctgcattggctgaagagctctttcacagaggagaacaattactaatg
gctggagaggtcttcagcctcagaccattgcagttatatgctatcactcaacaattgcgc
caggggaaacctacgtgcgctaatggagatgccaaaactgatctaggtcatattctggat
ttcacatgtagactcaaatatttaaaggtaactggcacagagggaccttttggaaccagc
aacattcaggagcatctcttaccttttgatttgtcaatatttaaatctcttcatcagata
gagataaatcactgtggtgcaaatcttattaaagggctgacatcatcaaagcacacttta
accacgatgagtattcggttttcagcaacctcaatgaaagaaattctagtgcctgaggcc
tctgaatttgaccaatgggagccagagggtgccctttcaagttttcctgtgacagcggtt
atcccaacttggaagactttaacaactttagatatgagtcacaatcgcatatttcagatt
gatgattcagtgaaactaattccgaagattgaattcctagaattgagtcacaatgatgtg
tcgctagtagagaatttacagcatctttacaacctcattcatctggacctatcctacaac
aaacttgcatcgttggaaggtgttcatacaaaacttgggaacatcaaaactctgaattta
gcaggaaaccttctggaaaggctatgtggccttaacaaactgtactcgctagtcaacctg
gatcttagcagcaacaaaatagatcagattgacgaaataagaaatataggaagccttcca
tgtttagaaaaggtggtcttatccaacaatcctttgagcatcattcctgattacaggacc
aaagtgctagcccagtttggggacagagcctcagaggtctgtttggataatatcagtacc
acagaaaaggaacttgacactgtagaagtgttgaaagctattcaaaaagcaaaggaggtt
aaatacaaactgaataactctgataagaagatcagtgaggattccaggctcactgctgcc
agctccaaatcaaactgttcttctcttactgttcatccttcctcctcttctctgcctcgt
cctgtcagctccagccaagaaatagtttgcagaaaaacagccctagccagcagtttatcg
ccatccagtagttcgactcctacagaccatacagttacccagagatgctctgaaatacta
gactctagatacagaaatcaggtgcctacttctctgttggacttatcaaaagaatatgga
agaggtcatcacatttgtttggaccattcagatgaagaacatggtgcattgcctgaccct
tgtaacaccatcatcttgccttttacctgtatgtcatacactgccaccaaccaggatttt
atccagcacctctccaccttgatagcacaggctttgcagagatcacccccttcctctact
gaaatagaaaacaaagggagccctgtgaatgattccagtgtcacggataatgaagatggc
tattttgaaatgggacttggagaccggactttcgagttcagtgctacttcagatattgcc
ccaccagctccagacagcacaagagcagagggcatagacatagtcaaagttctctggagt
ttttctattcaggttcataaaggaggaggagccaggcagtttgcctcttgtttggttttg
actgatagtgtagtagctgtgtttgagattcctcatcaagattcaaaaggcaactgccaa
catatcccagctgccttgaaactagcactgtgctttccatatacagatcttacagagttt
ggctttctcatgccagaaatatgtttaaccctcaaggtgagaaataatgacaactgcctg
tttgtcgtttcggactcccaaaatcttcaggacttctattcctgtttacaaacatgctgc
tctcaaagctgcacatccctgttttcaagttccacgttgtactgtggcaaagcaagcttg
caagaatttgtctaccaactgatgggattttatcacatttcacccgatggcatggagata
aaaggttgcttcccaacttaccttgtttacagtaataaaactgatgttcagaaagccttg
cgtctaccagaatcagtggatgataacagagcatggtctgaccatgccttgtgttctgca
ctttattccacattgtataaatctgctgaacagagtcactatgcattccatccttgttgg
atatttctgacaccccagcatttgcacatagtaaaggttgattttaatgtaatgccagct
aaatgtatagactcagaagatgcaagaaatgtattcaagctgagcaggattccactggct
tctgttgtgttgcatccgaccaatcatcccatccagcagaaagggtcattttcagatgga
catgtgctagagttactcattggacacaaatttgttacagcagtatttgttctacctcat
gaaaaattccattttctaagaatctacagtcttttgaggacacttctgcaggacgttaaa
actatagttattttgaaagcttccaacagtttggaaccagtaaaaaatcacctcttggat
tcaaaaaacagacacggccagacagcaggcttttgcaagccttgtttgacgctatcatct
ttatatccatctgaatttctgatgcagaaaattacggaagataaccaaattccagcttat
cttccaatctcttcatctcttcagtatgtggctgggctaaaaggaaatgcgattgtggag
tttttccataacagcgttgctgaggtggaaaacgaagagctgagacattttatgtggtct
tctgttttattttataaaactcctgacacggaagtgacagcttgtgtgatgctctcaaca
aaagctatttactttctgttggatgattctgtaactcatactaatgagcatcagttggac
ttttggaaccaagaaaactcagattgtgaaaatagctctttccacctctcctgctgcttt
gtgctaaaacttaacgatctgcaatcagtgaatgttggactttttgatcaatattttcga
attactggacattctgcagatcatatagtaacctgcctaaccagagacagttacagtact
catgcctttatacagcacctcatggcagtgctgtcattgctggcacgcacaccttcacca
gaaccagtagataaggatttctactctgaatttgggaataaaaatacaggaaaaatggag
aattatgaactgattcactctagtagagtaaagtttatatatcccaatgaagaggaaatt
ggggaccttgcttttctagtggcagaaaagatgtacagtttggctaacctccagtctcta
aatatccttctgtatgtgttggcatttcaagtgaatcatacagaagaaactgctcaagcc
aatagttcacttcagcctaaaacactcattttaaccagttctgatttgttccttttcaat
gaggattatatcagttacccgctacctgaatttgcaaaggaaccaccaaagaaagacaag
tatcaactcatagatggaagacgaatccgtgatttagacagagtgcttatgggctaccag
acatatccacaggccctcacgtttgtgtttgatgatgttcagaaccaagatctcatgcag
aacctaacactggatcattttggagatactttcagtgccccaaagttaaatgctaaacat
aagggcagtgggaatggagagatccagtggtacatctttatcccaagtgcagaaagccgt
gagaaactaatatcactgcttgcaagacagtgggagatcttgtgtggtcgggagctgcct
ttggaactcactgggtaa
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integrated database retrieval system
