Trachemys scripta elegans (red-eared slider): 117879781
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Entry
117879781 CDS
T07347
Name
(RefSeq) 5'-3' exonuclease PLD3-like isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00564
Glycerophospholipid metabolism
tst00565
Ether lipid metabolism
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117879781
00565 Ether lipid metabolism
117879781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117879781
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
117879781
Membrane trafficking [BR:
tst04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117879781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
117879781
NCBI-ProteinID:
XP_034630965
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All DBs
Position
7:33685598..33696459
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AA seq
821 aa
AA seq
DB search
MSTGAGAGPASSFPATRPPGMRRRGSLRAGTPVRRSTRLAQSSAEETVLSKVPSAEGGSF
PLVLQPRASIKAHKLHLTSARDPSPTPASDPTPVPAMEPSAGSALEPLPILTREPPLPQL
KDEPTRTAMKRGLSRKPAARLEASRSNRWVALDQDAHLSPYVRLKRLQISEEDEEKEELF
PTRSESSGEKEKLNLDWQEFRDERAQLQVLETALLGSETATVTEIMAPRLQGKAASNTPR
LQGTAVWLQGGAASSLPRLQGGVPRLQDRAQISTPRWQSAAPRLRSVAPGTPVLTETDTP
RVRHVAHGTPSLAMWTETAALRSPAPRPKNPGKPSKVKERSTPLHWSVQHFLFSSTCCIL
LPFLLILGFSGWFLWEHSSPVSVLGLMEQWKLGWSHVASLWREPEEECSPQCSLVLVESI
PVGLDYKHSNSRHLPIFQAWMDLLDAANRSVDIAAFYFTLRDSDMQEEEPSSWQGRQVLE
KLRDLPSRGVKLNIAVNSPQKSDRDTEELASKGADVKYVELERLTGGIVHTKFWVVDGKH
VYIGSANMDWRSLTQVKELGAVLYNCSCVAGDLHRIFAMYRALGGQGASLPTVWPAYVSA
KSSLSRPLKLQLNGSSAELYLSSSPPALCSTGRTPDLTAIVSTIQDAQAFVYISVMDYVP
QCTFCQPKRFWPVIDDALRAAACNRHVKVRLLISCWQHSDQSMFLFLESLSVLSREPLGC
PIEVKLFVVSTSVEEKQIPFSRVNHNKYMVTDRLAYIGTSNWSEDYFTNTAGVGLVVNQS
EAAPGVTQLTLREQLEAVFHRDWSSPYSQPLSPKPSCATKN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgggcgcgggagccgggcccgcctcttccttccccgccactcgcccgcccggc
atgaggagacgggggtcgctgcgcgcggggactcccgtgaggcgctccacgcgcctggcg
cagagtagcgcggaggagacggtcctgagcaaggtgcccagtgctgagggagggagcttt
cccctcgttctgcagccccgggccagcatcaaggcccacaaactgcatcttacttcggcc
cgggatccatcgcccactccagccagtgatcctacccccgtgccagccatggagccctcg
gctgggtcagccctggagcccttgccaatattaaccagggagcctccactgccccagctc
aaggatgaacccaccaggactgcgatgaagagaggcctctcccggaagccagcagcaagg
ctggaggcttccaggagcaatagatgggtggcactggaccaagatgcccacttgtcaccc
tatgtgaggctgaagaggctgcagatctcagaggaggatgaagaaaaggaggagcttttc
cccacccgaagtgagagctcaggggagaaagagaagctgaacctggactggcaagagttc
agagatgagagagcccaactgcaggtgctggagactgcactgcttggctcagagacagcc
actgtcacggagatcatggcccccaggctgcagggcaaagcggccagcaacacccccagg
ctgcagggcacagctgtctggctgcaaggcggggcggccagcagtctccctaggctacag
ggtggggtccccaggttgcaggacagggcgcagatcagcacgcccaggtggcagagtgca
gctcccagactgcggagtgtggcacctgggactccagttctgacagagacagatactccc
agggtgcggcacgttgcccatggaacaccgagcttggcgatgtggacagaaactgcagca
ctcaggtcaccagctcccagacccaagaacccagggaagccgagcaaggtaaaggagaga
tccacacctctgcactggagtgtccagcatttccttttctcctccacctgctgcatcctt
cttcccttcctgctcatcttgggcttctctggttggttcctgtgggagcacagcagccct
gtctctgtcctggggttgatggagcagtggaagctgggctggagccatgtcgccagcttg
tggagagagccagaggaggaatgcagcccacagtgcagtttggtgctggtggaaagcatc
cctgtgggcctggattacaaacactccaactcccgccacctccccattttccaggcctgg
atggacctgttggatgctgccaaccgctctgtggacatcgcagctttctacttcactctc
cgggactcagacatgcaggaggaagaaccctcatcctggcagggcaggcaggtgttggag
aagctgcgggacctgccttctcggggggtgaagctcaacattgctgtgaatagcccccag
aagtctgaccgggacaccgaggagctggccagcaaaggtgcagatgtaaagtatgtggag
ttggagcgcctgactggaggaattgtgcacaccaagttctgggtggtggatggcaagcac
gtctacattggcagcgccaacatggactggcgctcgctgacacaggtaaaggagctgggt
gctgtgctctacaactgcagctgtgtggctggtgacctgcaccggatcttcgccatgtac
cgtgcattgggagggcagggggcctcactcccgacggtgtggccggcttatgtctccgcg
aagtccagcctcagccgccccctgaagctgcagctcaatggcagcagtgcagaactgtac
ctctccagctcccctcccgccctctgctccactggccgtaccccagacctcacagccatt
gtcagcaccatccaggatgcccaggcctttgtctacatctcggtgatggactatgtgccc
cagtgcaccttctgccagcctaagaggttctggccggtcattgatgatgcgctgcgtgct
gcggcctgcaacaggcacgtgaaggtgaggttgctcattagctgctggcagcactcggac
cagtccatgttcctgttcctggagtcgctcagtgtcctcagccgggagcctctgggctgc
ccgatcgaagtgaaactctttgttgtctccacgtcggttgaggagaaacagattcccttc
tcccgtgtcaaccacaacaagtacatggtgaccgaccgcctagcctacattggcacctca
aactggtctgaggattacttcaccaacactgcaggggtggggctggtcgtcaaccagagt
gaggctgctcctggggttacgcagctcaccctgcgggagcagctagaagctgtgttccat
cgagactggagctctccctactcacagccactcagccccaagcccagctgtgccaccaag
aactga
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