Trachemys scripta elegans (red-eared slider): 117879817
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Entry
117879817 CDS
T07347
Symbol
TRIM8
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117879817 (TRIM8)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117879817 (TRIM8)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117879817 (TRIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
TRIM_CC
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-B_box
zf-C3HC4_3
zf-RING_10
zf-RING_5
FliD_C
U-box
PAS-like
DUF4878
DUF7125
dCache_2
Motif
Other DBs
NCBI-GeneID:
117879817
NCBI-ProteinID:
XP_034631088
LinkDB
All DBs
Position
7:complement(122945119..122999754)
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AA seq
552 aa
AA seq
DB search
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKETGLVRCPECNQAYN
QKPNLEKNLKLTNIVEKFNSLNLEKTPSVLHCVFCRRGPPLPAQKICLRCEAPCCQSHVQ
THLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQFCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEEQLYKLESDKRLVEEKVSQLKDEVRLQYEKMH
QLLDEDLRKTMEILEKAQAKFCNENAAQVLHLNERMQEAKKLLSSVQVMFDKTEDINFMK
NTKSVKILMDRTQNCTGGSLPPPKIGHLNSKLFLNEIAKKEKQLRKLLEGPFSTPVPFLQ
SIPMYPCPSVSNSGAEKRKHSAAFPEGSFLEPSSGTVASQYMSQGASAGEGQSAQPMVPC
SSTQHIVGLPSGPQPVHSGSVFNPSHYPNSTSSQQSVLSQYGGRKILVCSVDNCYCSSVS
NHSGHQPYPRSGHFPWTVASQEYSHPLPPAPAVPQSLPGLAVREWIDASQQHGRQDFYRV
YGQPSTKHYVTS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaattggaagaactgtttcgaagaggaacttatatgtcccatttgcctgcat
gtctttgtggaacccgttcaacttccttgtaagcacaatttctgcaggggctgcataggg
gaggcgtgggccaaagagactgggttagtgcgctgtccggaatgcaatcaggcctacaac
cagaaacccaacctggagaagaacttgaaactgaccaacattgtggaaaagttcaactcc
ctcaacctggagaagaccccctcggtcttgcattgcgtcttctgccgcaggggccccccg
ctgcccgcccaaaagatctgtctgaggtgcgaggccccctgctgtcaatctcacgtgcag
acgcacctgcagcagccctccacagcccgggggcacctcctggtggaggcggacgatgtc
cgggcctggagctgcccccaacacaacgcctaccgactgtaccactgtgaagcggagcag
gtcgccgtgtgccaattctgctgctactacagcggggcccaccagggccattcggtgtgt
gacgtggaaatccggcgtaacgagatcaggaagatgctgatgaagcagcaggaccgcctg
gaggagcgggagcaggacatcgaggagcagctctacaagctggagtcggacaagcggctg
gtcgaggaaaaggtgagccagctgaaggacgaggtgcgcctgcagtacgagaagatgcac
cagctcctggacgaggacctgcgcaagaccatggagatcctggaaaaggcccaggccaag
ttctgcaatgagaacgcagcccaggtgctgcacctcaacgagcgcatgcaggaggccaag
aaactgctcagctccgtccaggtcatgttcgacaagaccgaggacatcaacttcatgaag
aataccaagtccgtgaaaatcttaatggacaggacccagaactgcacgggcggcagcctg
ccgcctcccaagattggccacctcaactccaagctcttcctgaacgagatcgccaagaag
gagaagcagctgaggaagcttctggaaggtcccttcagcaccccggtcccattcctacag
agcatccccatgtacccgtgccctagcgtcagcaactccggagcggagaaacgcaagcac
tccgcggccttccccgaaggcagctttctagagccatcgtccgggactgtggctagccag
tacatgagccagggggcttccgctggcgagggccagtccgcacaacccatggtgccttgt
agctccacgcagcacattgtcggactgcccagtggcccgcagccagtccactctggttcg
gtcttcaacccgtctcactatcccaatagcacgtcatctcagcagtctgtgctatcccag
tacggcgggcgcaaaatcctggtgtgctcagtggataactgttactgttcctcggtgtcc
aatcacagcgggcaccagccgtaccccaggtcgggtcacttcccctggacagtcgcttcg
caggagtactcccacccgcttccccctgctccggctgtacctcagtcgcttcccggactt
gccgtgagggaatggattgacgcatcccagcagcacgggcggcaggatttctatagagtc
tacggccagccttccaccaaacactacgtcaccagttaa
DBGET
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