Trachemys scripta elegans (red-eared slider): 117879853
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Entry
117879853 CDS
T07347
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B
KO
K14005
protein transport protein SEC31
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117879853 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117879853 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tst02044
]
117879853 (SEC31B)
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117879853 (SEC31B)
Secretion system [BR:
tst02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
117879853 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40
Beta-prop_EIPR1
EIF3I
WDR55
Beta-prop_EML
Beta-prop_WDR35_TULP_N
TPR_Sec16
Beta-prop_HPS5
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF12
Prp18
Motif
Other DBs
NCBI-GeneID:
117879853
NCBI-ProteinID:
XP_034631194
LinkDB
All DBs
Position
7:complement(55486938..55534476)
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AA seq
1197 aa
AA seq
DB search
MKLKEIERTAVQVWSPASNHPIYLATGTSAQQLDASFSTNATLEIFEIDFRDPSLDMKCR
GILPASNRFHKLIWGSFGNGSSDSSGVIAGGGDNGVLTLFSATQILTSGTESVIGQREKH
TGPVRALDFNPFQCNLLASGANDSEIYIWDLNNFSVPMTPGAKSQPQEDISAVSWNRQVQ
HILSSAHPSGKAVVWDLRKNEPIIKIGDHSNRMHCSGMAWHPEVATQLVLSSEDDRMPVI
QIWDLRFATSPLSQLEGHTRGVLSISWCQADPELLLSSAKDNRILCWNPCIGEVIYELPT
QSQWCFDVQWCPRNPSVFSAASFDGWINVYSVMGGSLAAQQKTQADKISSSFNNLDPFGT
GQTLPPLQVPEQVAQTTLIPPLKKPPKWIRRPVGVSFAFGGKLITFGLTKAPAQQMQQIP
PRQVFISQVVTETEFLARSRELQMALQSGNLLDYCQSKIRAAQLQFEENLWNFLKVNMEP
ESRTKLLKLLGYSKEELQKKITSCLGNGIPEKQHFPEADGLAQAAQPPVQGSRCSMIEVG
AASSSSGFFDSLVPQDMSTLEIPVTTDTDGLISQALLVGNFAGAVQLCMRADRFADAIIL
AIAGGETLLRETQMQYFAKRKTKISQLLSSIVQQNWRDVICTCDLQNWKEALAILLTYSK
QEEYAQLCDILGARLESEGKGVLSSEACLCYISSGNVERLAKCWVKNHETSSPLALQDLV
EKVMVLSRSIEMLRGSVGPALGPVLAERVTQYARLLASQGCLAAAMSYLPRSSDELLIQQ
LRDRLFHAQGESVGDQQPPPFPYARVHVGPVSHPLPAAKSSSAPEGSARRPGPRHPEKPV
YQPSFTPPVSVQSSVPSLFMPLPVPAVPMAPPQASISPTTSMYSRAGGRPPYCQYASGLA
PATVPGPALGEAPTLSLPGARLAGPAAFPNQPPISGQPGPIAPPGVPPPGSTFFPPASVP
AQHPAACPLPTAGQPPMLFPSAPFSCPPGVGYPQGGPGAPSIPPPPTDQESWNNPSALRG
GFQKKKLSEKFTPPAPITAPVMSLPTEPRALLPQIPRSQEPGQAPPGAPKEGSMQFPQLP
TERIERKELPPEHQGLKATFEGLVQRCSAVATDPKTKRKLEDAAQRLECFYEKLREQALS
PHILMGLHEIARCMEARSYQQGLLVHTQVVGSSSFSEVSGFMPILKVLMTIASKLNV
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaggaaattgagcgaacagctgttcaggtgtggagtccagcaagcaatcac
cccatctacctagcaacagggacatctgctcagcagctggatgcctccttcagtacaaat
gccaccctggaaatctttgagattgacttcagggacccttccctggacatgaagtgcaga
ggaatccttcctgcttccaacaggtttcacaagctgatctggggcagctttggaaacggg
tcgtctgattcctccggggtgattgctggtggaggggataatggagtgctaacgctgttc
agtgcaacccagattctgacgtcagggacagagtctgtgatcggacagcgggagaagcac
actggccccgttcgagctcttgactttaatcctttccagtgtaacctcctggcctctggg
gccaatgattctgaaatttacatctgggacttgaataacttcagcgtgccaatgacgcca
ggggctaaatctcagcctcaggaagacatcagcgcagtgtcctggaatcgtcaggtgcag
cacatcctgtcctccgctcaccccagtgggaaggctgtcgtgtgggacctcaggaagaac
gagcccatcatcaaaatcggcgaccacagcaacagaatgcactgctcgggaatggcctgg
cacccagaagttgctactcagctggtcctttcctctgaggatgaccgcatgccggtgatc
cagatatgggacctacgctttgccacctctcctttgagccagctggagggtcacacgagg
ggagtcctttctatctcttggtgccaggctgaccctgagctccttctcagtagtgccaaa
gacaaccggatcttgtgctggaacccctgcattggtgaggtgatttatgagctgcccact
cagagccagtggtgctttgatgtccagtggtgccctcggaatccatcagtcttctccgct
gcctctttcgatgggtggatcaatgtttattctgttatgggtgggagcctagcagctcag
cagaagactcaggctgacaagatctcctcctcctttaacaacctggaccccttcggcacg
ggacagacccttcctcctcttcaggtgccagagcaggtggctcaaaccaccttgatcccg
ccactgaaaaagccccccaagtggattcgcaggccggtgggggtctcgtttgcattcgga
gggaaattaatcacttttggcctcaccaaggccccagcacaacaaatgcagcagattccc
ccgcgccaggtgttcatcagccaagtcgttactgagacagagttcctggcccgatccaga
gagctgcagatggccctgcagtcgggaaacctcctggactattgtcagagcaagattcgg
gcagcccagctgcagtttgaagagaacctctggaacttcctgaaggtgaacatggagcca
gaatccaggactaaactcctgaagctgctgggctatagtaaagaggagctgcagaagaag
atcacgtcctgtttagggaatggtatcccagagaagcagcactttcctgaggcagatggc
ttggctcaggctgcacagccgcctgttcagggctcaagatgctccatgatcgaagtgggt
gctgcttcctcctcttcagggttctttgacagcctcgtccctcaggacatgagcacattg
gagatcccggtcacaacagacacggacgggctgatcagccaggcgctcctggtggggaac
tttgccggcgctgtgcagctgtgcatgagggctgaccgttttgctgatgccatcattctg
gctatcgctgggggggagacgctactgcgggagacccagatgcagtactttgccaaacgg
aaaacaaagatttctcagcttctttcctccatcgtgcagcagaactggcgagatgtaatc
tgcacatgtgacctgcagaactggaaggaggcactggccatcttgttaacgtactccaag
caggaggaatacgcccagctctgtgatatactgggggcccgtctggagtcagaaggcaaa
ggggtgctgtccagtgaagcctgcctatgttacatctcatccggcaatgtggagaggttg
gcgaaatgctgggtaaaaaaccacgagacctcatcacccctagctctgcaggacctggtg
gagaaagtgatggtgctgagcaggtccattgagatgctccgaggctctgtggggccagct
ttgggccctgtcttggcagagcgggtcacccaatatgccaggctcttggcatcgcagggg
tgtttggcggcggcaatgagctatctaccccgcagctctgatgagctcctgatccagcag
ctccgagaccgtctcttccacgctcaaggggagagcgtgggcgatcagcagccgcctcct
ttcccctatgctcgtgtgcatgtcgggccagttagccacccattgccggcagccaagagc
agctctgctccggaagggtcagcccgcagaccgggtcccaggcatccagagaagcccgtg
taccagccatccttcaccccgccggtgtcagttcagtcttcagtgccttcactcttcatg
cctctgccggtgccagcggtgcccatggctcctccccaggccagcatttcccccactacc
agtatgtactccagagcaggaggccggcccccttactgccagtacgcctccggcttggca
ccagctacggttcccgggccagccctgggagaggcccccacattgtccctgccaggagcc
agactcgctggaccagctgcctttcccaatcagcctcctatttcaggacagcctgggccc
attgcaccccctggcgttccaccaccaggatcaaccttcttccctccagcctcggtccct
gcacagcatcctgccgcctgtcctctccccacagcggggcagccccctatgctttttcct
tcagctcctttcagctgccccccaggtgtgggctaccctcaggggggccctggagctcct
agcatccctccccctcccaccgatcaggaatcttggaacaatccctctgctctcagggga
ggctttcagaaaaaaaagttgtcagagaagttcacccctccagctccaatcacagctcca
gtaatgagcctccccacagagccgcgggccctgctgcctcagattcccagatcccaggaa
cctggccaggcacccccgggagcacccaaagaaggcagcatgcagtttccccagctgccc
acagagagaatcgagaggaaggagctgcccccggagcaccaggggctgaaggctaccttt
gaagggctggtgcagcgctgcagtgccgtcgccaccgaccccaaaaccaaaaggaaactg
gaggacgcggcgcagcggctggagtgcttttacgagaagctccgggagcaggctctctcc
cctcacatcctgatggggctacatgagatcgctcgctgcatggaggcacgcagctaccag
cagggcctgctggtccacacccaggtggtgggtagcagcagcttcagtgaggtgtctggc
ttcatgcccatcctgaaagtcctcatgaccatcgccagcaagctgaacgtctag
DBGET
integrated database retrieval system
