Trachemys scripta elegans (red-eared slider): 117879888
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Entry
117879888 CDS
T07347
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tst01001
]
117879888 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117879888 (DCAF1)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117879888 (DCAF1)
Protein kinases [BR:
tst01001
]
Serine/threonine kinases: Other
Other
117879888 (DCAF1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117879888 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
PBP_sp32
Motif
Other DBs
NCBI-GeneID:
117879888
NCBI-ProteinID:
XP_034631291
LinkDB
All DBs
Position
7:complement(46602453..46716155)
Genome browser
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQGNEMTMKQENKRPSPRKLPSEPLLPLDEEAVDMDYGEMAVDGEQEEVAGDMDISFHL
DTSHKTSSRVNSATKLEDMGLRKSKSGKQHERDSFRKAKQKLGFSSSEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
SFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVAAAASPVALPRTP
RIANGISARLSSHASVGSTATSVHAQPRPSVSQGPLALPGPSYASNSPLIGRISFIRERP
PPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGDNDFAPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaggatctgggcatgtggactccaaggctgaactcactgctttgctggagcaa
tgggagaaagaacatggcagtggacaagacatggtccctatcctcaccagaatgtctgag
ttaattgagaaggagactgaagaataccgcaagggggatccggacccatttgatgacaga
caccctggtcgagcagatccagagtgtatgctgggccatctgctgagaatacttttcaag
aatgacgacttcatgaatgcgctggtgaatgcttatgtgatgacaagcagggaacctcca
ttaaatactgctgcctgccgactccttctggacatcatgccaggactggaaactgctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctatttaagtgggcccgagaggcggat
cagccattgaggacatatgcaactgggttgctaggaggtgctatggaaaaccaagatatt
gctgccaactacagggatgagaactctcaactggtagctttggttcttcgacggctacgg
gagctacagggtaatgaaatgaccatgaaacaggaaaacaagcgtcccagtcctcggaaa
ctgccttcggaacctctgttgcctctggatgaagaggctgtggatatggactatggggag
atggcagtagatggggaacaggaggaagttgccggggatatggacatctcttttcatctt
gatacaagccacaagaccagcagtcgagtgaattctgccaccaagcttgaggacatggga
ctaaggaaaagcaaatcagggaaacagcatgaaagagacagcttccggaaggccaaacaa
aaactgggcttctcttcttcagagccagagcggatgtttgttgagttatccaacagcagc
tggtcagaaatgtccccatgggtaattggcaccaactataccctttaccctttgactcct
gccatagagcagagactaattctgcagtacctgacccccttaggagaataccaagagctg
ctccctatcttcatgcaacttggatcaagagagctgatgatgttctacattgacctgaaa
cggaccaatgatgtgctgcttacctttgaagctctaaagcatttggcatcgttgctgctc
cacaacaagtttgctacggagtttgttgctcatggaggagtgcagaagctgctagagatt
cctcgtccttccatggcagctacaggggtctccatgtgcttatattatctatcctacaac
caggatgccatggagagggtgtgcatgcatccccataacgtgctgtcggatgttgtgaac
tacaccctgtggttgatggaatgctcccatgcctcgggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcctggagctcttcgacaggcatgatggcctc
cgtcgcctagtgaacttgatcagcaccttggagatcttaaacctggaagaccagggagcc
ctcctcagtgacgacgagatctttgccagtcgccaaactgggaagcacacttgcatggcc
ctgcgcaggtactttgaagctcaccttgccatcaaacttgaacaggtgaagcagtcgctt
cagcgcactgaaggtggcattctggtccatccgcaaccaccgtacaaggcctgttcctac
actcatgagcagattgtggagatgatggagtttctaatagagtatggtccagcacagctc
tactgggagccagcagaagtctttctcaaattgtcttgtgtgcaactcatgctccagctt
atctccatagcatgcaactggaagacatactatgccaggaatgacacagtacgctacgct
ttggatgttctggctatccttactgtggttcctaaaatccagttgcagctggcagagcct
gtagatgtgttggatgaagcaggatctactgtctccactgtgggtatcagcatcatcctg
ggagttgctgagggtgaatttttcatccatgatgcagagatccagaaatcagcccttcag
atcatcatcaactgtgtgtgtggcccagataatcggatctccagtatcggcaaattcatc
tcgggaacaccccgacgaaagctcccccaggcacccaaaagcagtgaacacacactggcc
aagatgtggaatgtggtgcagtccaacaatggcatcaaagtgctgctgtcactgctgtct
ataaagatgccaattacagatgcagatcagatccgagcgttagcctgcaaggccttggtg
gggctgtcccgtagcagtactgtccggcagatcatcagcaagcttcccctcttcagcagc
tgtcagatccagcaactgatgaaggagcctgtgctccaggacaagcgcagtgaccatgtc
aagttctgcaagtatgctgctgagctgatagagcgtgtctcggggaagccattgctgatt
ggcacagatgtctccttggctcggttgcagaaagcggatgtggtggcccagtcaaggatc
tcgtttcctgaaaaggagttgctgcttttgattcggaaccatctcatctctaaggggcta
ggagaaactgctactgtcctcactaaagaggcagatctacccatgactgcggcatctcac
tcctctgccttcacccctgttgcagccgctgcctcccctgtggctctgcctcgcacacct
cgtatagctaatggtatctcagctcgactgagtagccatgcttctgtaggttctactgcc
acttctgtccatgctcaaccaaggccttctgtatcccagggtccacttgcccttccaggt
ccttcttatgccagcaactcccctttgattggcaggattagcttcatcagagagaggcca
ccaccctgcaatggcaggaaaatcagagtgctgagacaaaaatcggaccacggcgcctac
agccagagcccagccatcaaaaagcagctggacagacacctcccttccccacccacgctg
gacagtataattacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgcccccctttctctctctttactccccaccagtgccctgagccaaaacagaggcgc
caggcgccaactaactttacctcgcggctgacccgtagggcggcctttccgaagtatgga
ggggtggacggtggatgctttgatagacaccttatattcagcaggtttcgtccaatttct
gtgttccgggaagcaaatgaggatgaaagtggctttacctgctgtgcattctctgcacgg
gagcgattcctaatgctgggcacttgcactgggcagctgaagctctacaatgttttcagt
gggcaggaggaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agggatggatctttactgctaacatctgctacgtggagccaaccattgtctgcgctgtgg
gggatgaaatctgtctttgacatgaagcattccttcccagatgatcactatgtggagttc
agcaagcactctcaggatagggtcattggcacgaaaggggacattgcccatatctatgat
attcagactggcaacaagctgttgactctgtttaacccagatcttgccaacaactacaag
aagaactgcgccacctttaaccccacagatgaccttgtcctaaatgatggggtgctctgg
gatgtccgttctgcacaggccatccacaagtttgacaaattcaacatgactatcagtgga
gtttttcatcctaatgggctagaggtcatagtcaacacagagatttgggatcttcgaacg
ttccatttgctgcacacggtaccagcattggatcagtgccgtgtagtcttcaactacact
ggtacagttatgtatggagctatgttgcaggcagatgatgaagatgacctactggaggag
aggatgagaagtccctttgggtcatccttcaggacattcaatgcaacggactataaacct
atagccaccattgatgtaaaacggaatatctttgatttgtgcacggacagcaaggattgc
tatttggctgttattgagaatcaaggaagcatggatgccatgaacatggatactgtttgc
aggctctatgaggtaggcaggcagcgtttggcagaagatgaagaggatgaagaggaagat
caggaggaagaagaacaagaggaagaggatgatgatgaagacgatgatgatacagatgac
cttgatgaactagacactgaccagctgctggaggccgagctggaggaggatgagaataat
gagaatgctggtgaggatggagacaatgatttcgctccctctgatgatgaggagcttgcc
aacttgctggaagagggggatgaaggtgaagatgaggattctgatgcagatgaggaagtt
gagctgatccttggtgatactgacagctcagataactctgacttggaagacgacataatc
ttgtctctgaatgagtga
DBGET
integrated database retrieval system
