Trachemys scripta elegans (red-eared slider): 117879912
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Entry
117879912 CDS
T07347
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2-like isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117879912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117879912
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117879912
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117879912
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117879912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
Mito_carr
Dna2_Rift
AAA_11
AAA_30
AAA_19
Cas_Cas4
nSTAND3
UvrD-helicase
bpMoxR
SRP54
SLC25_like
ResIII
AAA_29
AAA
AAA_25
AAA_7
AAA_23
AAA_18
CbiA
AAA_22
DEAD
MobB
Motif
Other DBs
NCBI-GeneID:
117879912
NCBI-ProteinID:
XP_034631346
LinkDB
All DBs
Position
7:complement(82397416..82464208)
Genome browser
AA seq
1313 aa
AA seq
DB search
MDTQGPAEPSAAAHRDFYWLRSFVAGGVAGCCAKTTIAPLDRVKILLQAHNHHYKHLGVF
STLCAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFDQYKKLIKKKLGISGHVHNLMAG
SMAGITAVICTYPLDMVRARLAFQVKGEHKYTGIIHAFKTIYTKEGGFIGFYRGLMPTVV
GMAPYAVSSQHVANYNKLTPRPHLGFSFFTFSTLKSIGLAQAPNLLGRPSLDNPEVLVLK
THVSLLCGGMAGAIAQTISYPLDVTRRRMQLGAALPDADKCLFQKRAVDFCDTTLSKGLN
NRYCVLRINIIQKNEDGPEKHLTITASQSLEDTELCILKNDWYSVPVVPGDIIHLEGDFH
SGTWIINRDSGYLILYPDLLLSGTTVSNSIRCMRKAVLSEKFRSCESSSRQMLIGTILHE
TFQQGVTNNFAHEKLQELAFRTVHGPKYLKEMYYLNLKQEEIMQEIEEYLPSISKWAEDF
MHKPSQANHNKMQLKLPSEGKIEDLSCNIEVTEFLDIEENIWSPRFGLKGKIDVTVGVKI
HRKSGTQYKIMPLELKTGKESNSTEHRSQVVLYTLLNQERRVDPEAGFLLYLKTGNMYPV
SGNRMDRRELLKLRNQLAFYLFHSMCKSALGNKQTQLASLPPLIDDSRACKYCSQMHNCF
LYSRAVEQQMDNVLIPPAVVPIIEKETQHLKLSHLKYFSLWYLMLTLESQCGEGKKGRKN
IWLMPASEREKAGDCIGNMIRVEHVQEASEGQYLHYFQRKNGTMPGTNLLVGDRVVVSGE
KTLLGLSAGYVKEVNVTTVSCLLDRNLSKLPKDTIFRLDHEEGISGIDAPLRNLSKLMEN
SSASEKLRNLIIDFHKPLFIQHLSSVLPPEAKETVANILKGLNKPQKQAMKQVLLSKDYT
LIVGMPGTGKTTTICALVRILYACGFSVLLTSFTHTAVDNILLKLVRFKVGFLRLGRAQK
VHPDIRKFTEEEICRSKSIKSITHLEELYNNQPVVATTCMGVNHPIFARKLFDFCIVDEA
SQISQPICLGPLFYSHRFVLVGDHQQLPPLVHNTEARDLGMSESLFKRLEQNKNAVVQLT
VQYRMNSKIMSLSNKLVYEGKLECGSEKVSKATVILPNLKNLTLELELFADSSETWMKET
LEPNNPVCFLNTEKVPAPEQAEKGGVSNMTEAKLVFFLTSFFIKAGCKASDIGIVSPYRH
QLKIITDLMKSSCISTVEVNTVDKYQGRDKSIIIVSFVRNNNDGNLGTLLMDWRRLNVAI
TRAKHKLIMLGCVPSLCRYPPLEKLLCHLNSEAMIFNLPSGAHERVYQFYDLL
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcaggggccggcggagcccagtgccgcagcgcacagagacttctactggctc
cgctccttcgtagcgggaggtgttgcaggatgttgtgccaaaacgactattgcaccattg
gatcgagtaaagattttactgcaagctcataatcaccattacaaacatttaggagtgttt
tctacattgtgtgctgtccccaaaaaggagggttaccttgggttgtataaaggaaacggg
gcaatgatgattagaatatttccatatggtgcaattcagtttatggcatttgaccagtat
aaaaagctaataaagaagaagcttggaatttctgggcatgtgcacaatttaatggctgga
tccatggcaggtataacagcagtcatttgtacttaccctcttgatatggtaagagcacgt
ctggcattccaagtaaaaggggagcacaagtacacaggaattattcatgcattcaagact
atttatacaaaggaaggaggtttcattggattttacagaggactaatgcctacagttgta
ggaatggctccttatgcagtgtcttctcaacacgttgcaaattacaacaagctgactcct
agaccacacttaggtttttcgttttttacctttagtaccttaaagagcattggacttgcc
caagcacctaacctgcttggaaggccttcattagataatcctgaagtcttagttttgaaa
acgcatgtaagcttgctatgtggtggcatggctggagcaatagcacagacaatctcatat
ccacttgatgtaactcgtaggcgaatgcagttaggagcggctcttccagatgctgacaag
tgcctttttcagaagagagcagttgacttctgtgacacaacactcagcaaaggtttgaac
aacagatactgtgtattaagaatcaacataatacagaaaaatgaagatggtcctgagaaa
cacctgacaattacagcttctcaatcacttgaagatacagaactgtgtattctaaagaat
gactggtattctgttccagtagttccaggagacatcattcacttagaaggagattttcat
tctggtacctggataataaatagagactctggatatctaattctgtacccagacttgctg
ctttctggcacaacagtatcaaatagtattcgatgtatgagaaaagcagtactgagtgaa
aagttcaggagttgtgagtccagttcacggcagatgctgattggtacaatccttcatgaa
actttccagcaaggagtaacaaataactttgcacacgaaaaactacaagaacttgccttc
agaactgtccatggaccaaagtatctaaaagaaatgtactacttaaatctgaaacaagaa
gaaatcatgcaagagatagaagaatatcttccatcaatatctaaatgggcagaagacttc
atgcacaaacctagtcaagctaaccacaacaaaatgcagctaaaactaccaagtgaagga
aaaatagaagatctatcttgtaatattgaggttacagagttcctggatattgaagagaat
atctggtctcccaggtttggattaaagggcaagattgatgttacagttggtgtgaaaata
caccgcaagtctggaacgcaatataagataatgccattggagcttaaaactggcaaggaa
tctaactccacagaacacagaagtcaggttgttctgtacaccttgttgaaccaagaacga
agagtggatcctgaagctggatttcttctttaccttaaaactggcaatatgtatcctgtg
tctggcaatcgtatggataggagagaattgctaaagctaagaaaccaactggcattttat
ttattccacagtatgtgtaaatctgccctgggaaataagcaaacacaacttgcctctttg
cctcctctaattgatgatagtcgggcctgtaaatattgctcacaaatgcacaactgcttt
ctttatagcagagctgtagagcaacagatggataatgtccttattcctcctgctgtggta
cccattattgaaaaagagacccagcatctgaaattgtctcacttaaagtatttcagcctg
tggtatctgatgttaaccttggagtcacagtgcggagagggcaaaaagggacgtaaaaat
atatggctgatgcctgcttcagaaagagaaaaggctggagactgcattggaaatatgatc
agagtcgaacatgtgcaggaagcttctgaaggacaatatctacattatttccagcgtaaa
aatggtaccatgcctggaacaaacctgttggtaggagatagagttgttgtgagtggagag
aagacattacttggcttgtctgctggctatgttaaagaggtcaatgtgacaacagtttcc
tgtttattggacaggaacttatctaaactccctaaggacactatatttaggctagatcat
gaagaaggaatttctggtattgatgcccccctaagaaatctttctaaactgatggagaat
tcttctgccagtgaaaagcttcgtaacttaataattgacttccacaaaccactgtttatc
cagcacttgagctctgttcttcctcctgaagcaaaggaaacagttgcaaacattttaaag
ggtctgaataagcctcagaaacaggcaatgaaacaagtgctactttcaaaagattacacg
ctcatcgtgggtatgcctggaacaggaaaaactactacaatatgtgctctagtaagaatt
ctttatgcctgtggcttcagtgttctgctgacaagttttacacacactgctgttgacaat
atcctgctgaagttagtcaggttcaaagtaggatttttgcgcttggggcgagctcagaag
gttcatccagatatacggaagtttacagaggaagaaatttgcagatccaaatcaattaaa
tctataactcatttggaggaactctataacaatcaaccagtagttgcaacaacgtgcatg
ggagtaaaccatccaatttttgctcggaaactgtttgacttctgcatagtggatgaggct
tctcaaataagccagccaatctgcctgggtccactgttctattcacataggtttgtgctg
gtgggggaccatcaacagctacctccacttgtacacaacacagaagcaagagatcttggc
atgagtgaaagcttgtttaagagactggaacaaaacaagaatgctgttgtccagttaact
gtgcagtacagaatgaatagtaaaattatgtcactaagtaataagttggtgtatgaaggc
aaattggaatgtggctcagagaaagtgtccaaagccactgttatcctgccaaacttaaaa
aacttgacgctggagctggaattatttgcagattcttcagaaacatggatgaaagaaaca
cttgagccaaacaatcctgtgtgttttcttaacacagagaaggttccagcaccagaacag
gcagaaaaaggtggtgtaagtaacatgacagaagccaaactagtattcttcctcacctcc
ttctttattaaggctggctgtaaagcttcagatattggtatcgtatctccatacagacat
cagttaaagataatcactgacttgatgaaaagctcatgtatcagtacagtggaagtaaat
actgtggacaaataccaaggaagagacaaaagtatcataatagtatcatttgttaggaat
aacaatgatggaaatcttggaacacttctgatggattggaggcgtcttaatgttgctatt
acaagagcgaagcacaaattaatcatgctgggctgtgttccatcactgtgccgctatcct
ccattagagaagctactctgccatttaaactctgaagccatgattttcaatcttccgtca
ggggcacatgaacgtgtctatcagttctatgaccttctatga
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integrated database retrieval system
