Trachemys scripta elegans (red-eared slider): 117879972
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Entry
117879972 CDS
T07347
Symbol
MYOF
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117879972 (MYOF)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Others
Ferlins
117879972 (MYOF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Motif
Other DBs
NCBI-GeneID:
117879972
NCBI-ProteinID:
XP_034631463
LinkDB
All DBs
Position
7:94759978..94872412
Genome browser
AA seq
2059 aa
AA seq
DB search
MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKIDSELNPVWNEILEFDLKGIALD
VSSSLTIIVKDFETIGQNKLIGNASVALKELVGNQSRSLPFKLISLLNERGENTGATIDL
VVGYEPPAGPANPNDPGGTNAQGTADGEEDGDYEDGADGTVGGIAPAVPSDAKEAQLARR
ITKGKKTRRILSNKPQDFQIRVRVIEGRQLSGNNIKPVVKVHVCGQTHRTRIKRGNNPYF
DEIFFYNVHMTPLELLDETISIRVYDSYSLRADSLMGEFKIDIGFVYDEPGHAVMRKWLL
LSDPEDTNSGAKGYLKVSMFVLGAGDEPPMEKRERDNENDDVESNLLLPAGIALRWVTFL
LKIYRAEDIPQMDDAFAQTVKEIFGGDGDKKNLVDPFVEVCFAGKKVCTNIIEKNANPEW
NQVVNLQIKFPSMCEKIRLTVFDWDRLTKNDVVGTTYLSLSKIASSGGEVEEFSSSGTGA
SSYEVNTGETEVGFLPTFGPCYLNLYGSPREYTGFPDPYDELNSGKEEGVAYRGRVLVEL
STILDSKSVNKKIESISSDDVLIVEKYQRRRKFSLSAVFHSATMLQDIGEAVQFEVSIGN
YGNKFDTTCKPLASTTQYSRVVFDGNYYYYLPWVNRKPVVTITSFWEDISHRLDPVNLIL
TMAERLQSNIAALKSGIQAKVSENQLAEIWLKLIDEVIEDTSKPFPLLEAKSNVTVLDTQ
IQKLRLKSLKHILDAATRMRTDATDVKVTLAEIEDWLDKLMQLTEEPQNSMPDVIIWMIR
GEQRLAYARIPAHQVLYSTTSSEASGKYCGKTQTVFLKYPQDKNKGAKIPVQLRVNIWLG
LTAVEKKFNSFAEGTFSVFAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKREFFLP
PKGWEWEGEWMVDPERSLLTEADAGHSEFTDEVYQNESRYPGGEWKAAEEPYTDVNGEKA
APPGEITCPPGWIWEDDAWIYDINRAVDEKGWEYGITIPPDNKPKSWVAAEKMYHIHRRR
RLVRKRKKDPSQATGVKVMASYEDKEGWEYASLIGWKFHWKPRSSDTFRRRRWRRKMAPS
DTHGAAAIFKLEGALGADTSLDEEEAKSSEKAKESATRVFGANTPIVSCSFDRVYSYHLR
CYIYQARNLIALDKDSFSDPYAHVSFLHQSKTTEIIHATLNPMWDQTLIFNEIEIYGDPQ
TVVQNPPNVVIELFDNDQVGKDEFLGRSVCSPMVKLNPEVDITPKLLWYPVMNGGKACGS
ILLAAELILRDKNGSNLPILPSQRAPKLYMVPQGIRPVVQLTAIEILAWGLRNMKNYQMA
SVTSPSLVVECGGEMVESVVIKNLKKTPNFPYSVLFMKVLLPKEEIYAPSLVIKVIDHRQ
FGRKPVVGQCTIESLEDFRCDPYATREDIAPQLKVSLLSAVPRRDVVIEMEDTKPLLAAQ
LTEKEEEIVDWWSKFYASIGDHEKCGQYIQKGYDTLKVYDCELEEVPEFKGLTDFSDTFK
LYRGKSEDNDDPSVVGEFKGSFRIYPLSDDPAVPAPPRQFRELPDSGPQECIVRIYIIRA
LALQPQDNNGLCDPYIKITLSKKVIEDRDHYVPNTLNPDFGRMYELSCFLPQEKDLKISV
YDYDMLTRDEKVGETIIDLENRFLSRFGAHCGIPQQYCISGVNTWRDQLKPTHMLQNIAR
LKGYSPPILSENGSRINYGGQDYTLEEFEINKKLHQHLGPGEERLALHILRTQGLVPEHV
ETRTLYSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNINPRKAKKYIMRVIIWNTKDVIL
DEKSITGEEMSDIYVKGWMPGNEENKQKTDVHYRSLDGEGNFNWRFVFPFEYFPAEQLCM
VSKKEHFWSLDKTEFRIPPKLIIQIWDNDKFSLDDYLGFVELDLHKTVIPAKVPEKCNID
MIPEYKAKNPLKAPKTVSLFEQKSMKGWWPCYTEKDGSRVLAGKVEMTLEVLNEKEADER
PAGKGRDEPNMNPKLDLPNRPETSFLWFTNPCKTMKFIVWRRFKWIFIGIIILLIVFLFL
AILLYSLPNYISMKIVNPI
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgggtgattgtggaatctgctaccaatatccctaaaactaaatttggaaaaccg
gatcctattgtttctgttatttttaaagatgaaaaaaagaaaacaaagaaaattgatagt
gaactcaaccctgtttggaacgagattctcgaatttgatttgaaagggatagcactcgat
gtttcatcatccctgaccattattgtgaaagattttgaaacaattggacaaaacaaatta
attggcaatgcatcagtagcacttaaggaacttgtaggcaaccagagtagatctcttccc
ttcaagcttatttccctgctaaatgaaaggggagagaacactggcgcaacgattgattta
gtggtaggatatgagccaccagctgggcctgcaaatccaaatgatccaggggggaccaat
gcacaaggcactgcagatggagaagaagatggagattatgaagatggggctgatggtaca
gttggtggcattgcaccagcagttccaagtgacgcaaaggaagcccagcttgctcggcgc
atcactaaaggaaagaaaacacggagaatcctttctaacaaaccccaagacttccagatt
cgtgttagggtcattgaaggtcgtcagttgtccggaaataacataaaaccagtagtcaaa
gttcatgtttgtgggcagacacaccgaacaagaatcaaaagaggaaacaatccatatttt
gatgagatattcttctacaatgtccacatgacccctttagagctgcttgatgaaacaata
agcattcgggtgtatgattcttattctttacgagcagactctctgatgggagaatttaag
attgacattggctttgtttatgatgaacctggccatgcagtcatgagaaaatggcttctt
ttgagtgaccctgaagacacaaattcaggagctaaaggctatctgaaagtcagcatgttt
gtcctgggggcaggagatgagccaccaatggaaaaaagagagcgggataatgaaaatgat
gatgtggagagtaatcttttactgccggctggaattgcacttcgatgggtcactttcctt
cttaaaatctacagagccgaggatattccccagatggatgatgcttttgcgcagactgtt
aaggaaatatttggaggtgatggagacaagaaaaacctagtagatccatttgtggaagtt
tgttttgctggaaaaaaggtttgcacaaatataattgaaaaaaatgctaatccagaatgg
aatcaagttgttaatcttcaaatcaagtttccctcaatgtgtgaaaaaataagattaaca
gtttttgactgggatcgtcttacaaaaaatgatgtagtaggaacaacgtatttaagtctc
tccaaaattgcttcttctggtggagaagtagaagaattttcatcttcgggaactggggct
tcatcatatgaagtaaacacaggggaaacagaggtgggctttttaccaacatttgggcct
tgttacctaaacctttatggaagcccaagagaatacactggattcccagacccctatgat
gaactaaactctggaaaggaggaaggagttgcttacagaggcagagtcctagttgaacta
tctacaatacttgacagtaaatctgtgaataaaaagatagagtcgatctccagtgatgac
gtactgattgttgagaaatatcagcgcagacgaaagttcagcctgtctgctgtgtttcat
tctgctaccatgctgcaagatattggtgaggctgtccagtttgaggttagcattggtaat
tatgggaacaagtttgacaccacctgtaagcctttggcatcaacaactcaatacagccgt
gttgtatttgatggtaactactattattacctgccatgggtgaacagaaagccagtagtg
acaataacttccttttgggaggacataagtcatagactagacccggtgaacctaatccta
accatggctgaaagactgcaatccaacatagctgccctaaagtcaggaatacaggctaaa
gtttctgaaaaccagttggcagagatatggctgaagctgatcgatgaagttatagaagat
acaagtaagccatttcccctcttagaagccaaatccaatgtcacagtccttgacacacag
atacaaaaactgcgcctcaagtctctcaaacacattctagacgcagcaacaaggatgaga
actgacgctaccgatgtgaaggtcactttggcagaaattgaagactggttggataaatta
atgcaattgaccgaagagccacaaaacagtatgcccgatgtgatcatctggatgatccgg
ggagagcagagactagcttatgcccgcattcccgcacaccaggttttgtattctacgaca
agtagtgaagcatctggtaaatactgtggaaagacccagacagtctttctaaagtaccca
caggacaagaacaaaggtgccaaaattccagtgcagttgcgagttaacatttggcttggg
ttgactgcagttgaaaagaagtttaatagctttgcagaaggaacattcagtgtttttgca
gaaatgtatgaaaatcaggctcttatgtttggaaagtggggcacctcaggactagttggt
cgccacaagttttctgatgtcacaggaaaaattaaattgaaaagagagttctttttgccc
ccaaagggctgggagtgggaaggagaatggatggttgatcctgaaagaagtttgctgact
gaagctgatgcaggtcatagtgagtttacagatgaagtgtaccaaaatgagagtcgttat
cctggaggagaatggaaagcagctgaggagccctacacagatgtgaatggagaaaaagct
gcaccacctggtgagattacctgtccccctggatggatctgggaggatgatgcttggata
tatgatataaatcgagcggtggatgagaaagggtgggaatatggaattacaattcctccc
gacaataagccaaagtcctgggttgctgcagagaaaatgtatcatatacacagacggcga
agactggtgcgaaaacgcaaaaaggatccaagccaagcaacaggagtaaaggtaatggca
tcctatgaagataaagaaggatgggaatatgcatctttgattggctggaagtttcactgg
aaaccacgcagttctgatacattccgccgtagacgctggaggagaaaaatggctccttca
gacacacatggtgcagcagctatctttaaacttgaaggtgctcttggagcagacactagc
cttgatgaagaagaggcaaagagctcggaaaaagccaaggagtctgccacacgtgtattt
ggtgccaacactccaattgtttcctgcagttttgacagagtgtatagttaccaccttcgc
tgctacatctatcaggcaagaaatcttattgctttagacaaagacagtttttcagatcca
tatgctcatgtttcattcctccatcaaagcaaaacaacagagatcatccatgcaactctg
aatcccatgtgggaccaaacgcttatatttaatgaaattgaaatctatggagacccacag
acagtagtacaaaatccacctaatgtggttattgaactttttgacaatgaccaagtgggc
aaagatgagtttctaggaagaagtgtttgctctcctatggtaaagctaaacccagaagtg
gatatcacacctaagcttctctggtatcctgtaatgaatggaggaaaagcttgtgggagc
atccttttagctgcagagcttattctgagggacaagaatggctccaaccttccaattctt
ccatcacaaagagcaccaaagctttacatggtacctcaaggaattagacctgttgttcag
ctcactgctattgagattcttgcctgggggttacgaaacatgaaaaactaccaaatggct
tctgttacttctccaagtctcgttgtagagtgcggtggtgaaatggtggagtcagtagtg
atcaaaaacctcaaaaagacaccaaattttccatattctgtactcttcatgaaagtgctt
ttgcccaaagaggagatatatgctccatcactagtcattaaagtgatagaccacagacag
ttcggacggaaaccagttgtgggacagtgtaccattgagtccctagaagactttcgctgt
gacccttacgctactagggaagacattgcaccacaactaaaagttagcctcctgtctgct
gtgcctcgtcgggatgtggtcattgaaatggaagacacaaagccactactagcagctcag
cttacagaaaaggaagaagaaattgttgattggtggagcaaattttacgcttcaatagga
gaccatgaaaaatgtggacaatatattcaaaaaggatatgacactttaaaggtatatgat
tgtgaactggaggaggtacctgaatttaagggcttgacagatttctctgatacatttaag
ctgtacagagggaaatcagaggacaatgatgacccttcagtggtaggagaatttaagggc
tcctttagaatctatccattatcagatgatcctgctgtaccagctcctcctcgtcaattc
cgtgagttaccagacagtggacctcaggagtgcattgtgcgaatttatatcattagagcc
ttagctctccaaccccaggataacaatgggctgtgtgatccttatataaaaataacctta
agtaaaaaagtaattgaagacagagatcattatgttcccaatactctcaacccagatttt
ggcagaatgtatgaactcagctgcttcctgcctcaagagaaggatctgaaaatttcagtc
tatgattatgatatgctgactcgtgatgaaaaagttggtgaaaccatcattgatcttgag
aacaggttcctttctcgctttggagctcattgtggcataccacagcagtattgcatttca
ggtgtaaatacctggcgagatcaactgaagccaacacacatgttgcaaaatatagccagg
ttgaaaggctactctcctcctatcctctcagaaaatggaagcaggattaactatggagga
caggactacaccttggaggaatttgagattaacaaaaaattgcatcagcaccttggacca
ggtgaagagcgtctagcccttcatatccttagaactcagggcttggtccctgaacatgtg
gagacaaggaccttatacagcaccttccagcccaacatctcacaaggaaagcttcagatg
tgggtggatgttttccccaaaagcttgggacctcctggccctcccttcaacatcaatccc
cgcaaagccaagaagtacatcatgcgggtgattatttggaacacaaaggatgtcattctg
gatgaaaaaagtatcacaggggaagaaatgagtgacatctatgtgaaaggctggatgcct
ggcaatgaagaaaataagcagaaaacagatgtgcactataggtcactggatggtgaaggg
aattttaactggagatttgttttcccctttgaatactttccagctgagcaactctgtatg
gtttctaaaaaggagcatttttggagtctcgacaaaacagaattcagaatcccacccaaa
ttgatcattcagatatgggataatgacaagttctccttggatgactacctgggttttgtt
gaacttgatttacacaaaacagttattccagcaaaagttcctgaaaaatgcaatatagac
atgattccagaatacaaggcaaaaaaccctctcaaggctcccaagactgtctcactcttc
gaacagaaatccatgaaggggtggtggccatgttacacagaaaaggacggctcacgtgtt
ttggctggtaaagttgagatgactctggaagtcctcaatgaaaaagaggctgatgaaagg
ccagctggtaaaggaagagatgaacctaacatgaaccccaagttagacctaccaaaccga
ccagaaacttccttcctttggttcacaaatccatgcaagacaatgaaatttattgtgtgg
cgcagatttaaatggatcttcataggcattatcatcctactgattgtattcttgtttctg
gcgatactcttatattcactgccgaattatatatcaatgaagattgtgaacccaatctaa
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integrated database retrieval system
