Trachemys scripta elegans (red-eared slider): 117879977
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Entry
117879977 CDS
T07347
Symbol
THOC7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117879977 (THOC7)
09122 Translation
03013 Nucleocytoplasmic transport
117879977 (THOC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117879977 (THOC7)
03041 Spliceosome [BR:
tst03041
]
117879977 (THOC7)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117879977 (THOC7)
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117879977 (THOC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
UPF0193
OVT1
COG6_N
Peptidase_S10
DASH_Dad2
DUF4407
Motif
Other DBs
NCBI-GeneID:
117879977
NCBI-ProteinID:
XP_034631473
LinkDB
All DBs
Position
7:complement(5403280..5416756)
Genome browser
AA seq
204 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCNSGSQEEGYSQYQRMLSTLSQC
EFSMGKTLLVYDMNLREMENYEKIYKDIENSIAAAHEKIAECKKQILQAKRIRKNRQEYD
ALAKVIQHHPDRHETLKQLEALGKELQHLSHIKENVEDKLELRRKQFHVLLSTIHELQQT
LENDEKLSEAEESQETHMEAETKQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtgacggatgatgaagttattcgtaaacgacttttaattgatggagatggt
gctggcgacgacagacgaattaatttgttagtgaagagcttcattaaatggtgcaactct
ggatctcaagaagagggatacagccagtaccaacgcatgctgagcactttatcacaatgt
gaattttcaatgggaaaaactctgctcgtctatgatatgaacctcagagaaatggagaac
tatgaaaaaatctacaaagacatagaaaatagtatagctgcagcgcatgagaaaattgct
gaatgcaaaaagcagatcctgcaagcaaaaagaatacgaaaaaatcgccaagaatatgat
gcattggctaaagtaatacagcaccatccagacagacatgaaacattgaagcagctagaa
gctttgggaaaagaacttcaacatctttctcacattaaagaaaatgttgaagataagctg
gaattgagacgaaagcagttccatgtgcttctgagtaccatccatgaacttcagcaaact
ttggaaaatgatgaaaaactttcagaagcagaggaatcccaagaaactcacatggaagca
gagactaaacaatag
DBGET
integrated database retrieval system
