Trachemys scripta elegans (red-eared slider): 117879985
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Entry
117879985 CDS
T07347
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117879985 (BTAF1)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117879985 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
TPR_Trm732_C
Cnd1
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
117879985
NCBI-ProteinID:
XP_034631487
LinkDB
All DBs
Position
7:complement(95752297..95859424)
Genome browser
AA seq
1856 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRI
AAGQAVEAIVKNVPEWKPTPRPKQESDSENPMDDSCASDRLRFDRFDICRLLKHGASLLG
SAGAEFEVQDDKSGEVDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYTPTS
ASLVNKQPVGKTSGCLTARNNTTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRD
ANETNEKSNDSTDGEPEEKRRKVANVVINQPATDSKVLVDNAPEEANEWPLESFCEEVCN
DLFNPSWEVRHGAGTALREILKAHGKSGGKMGDSTVEEMAQQHQEWLEDLVIRLLCVFAL
DRFGDFVSDEVVAPVRETCAQTLGVVLKHMNETGVHKTVDILLKLLTQDQWEVRHGGLLG
IKYALAVRQDMINTLLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESLVHLQSQKVPFI
LNTLWDALLELDDLTASTNSIMILLSSLLTYPQVQKCSIQQSLTVLVPRVWPFLHHTISS
VRKAALETLFTLLSTQDQSSSAWLTPILQDMLRHIFQFCILESSQDILDLIHKVWLELLN
KASVQYVVAAACPWMGAWLCLMMQPSHLPIDLNMLLEVKARSKEKAGGKLRQGQTQNKEV
IQEYIAGADSVTEDLATRDYVVMRARVMAAKLLGALCCCICDPSVNTVPQEIKPAESLAQ
LLLFHLNSKSALQRISVALVICEWAALQKECKAVALSVQPRLLGVLSEHLYYDEIAVPFT
RMQNECKQLISSLADAHIDIGNRVNYSVFTIDQANELVTTVFNEVTSVFNLNPNILQQLD
SKRQQVQMTVTETNQEWQVLQLRVHTFAACAVVSLQRLPEKLNPVIKPLMETVKKEENTL
VQNYAALCVAKLLQQCISRAPCPNSKIIKNLCNSLCVDPHLTPLAACPAQPQSSHENSKG
PNSERDGMHHTVTKHRGIITLYRHQKAAFAITSRRGPTPKAPKAQIADLPTGSSGNIATE
LDEAQKPYIVQRRGAEFALSTIAKHFGAEMVLGLPHLWDAMVGPLRNNTNLNSFDRKSLL
EKGDVSAQELVNSLQVFETTAASMDIQLHPLLIQHLPHLYMCLQHPSTAVRHMVARCVGV
MSKIATMETMNILLEKVIPWLGAIDDNTKQEGAIEALASVMEQLDVGIVPYIVLLVVPVL
GRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELILLKAKERHFLEQLLDGKK
LENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLR
AQEYARTKLVDSVPLPSLVVCPPTLTGHWVDEVSKFCSKEYLNPLHYTGPPTERARLQHQ
VKRHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILS
GTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEAL
HRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSSLQVQLYEDFAKSRAKCDVDETVSSAS
LNEETERPKLKATGHVFQALQYLRKLCNHPALVLTTQHPEYKRTTEQLAAHNSSLRDIQH
APKLSALKQLLLDCGLGNGGSSESGTEAVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSV
TYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMR
DLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTD
QLLDLFTLDKDGKSEKADTSSGKASMKSVLENLGELWDPEQYDSEYSLESFMHSLK
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccaggcttgatcgtctcttcattttactggacactggtaccacaccggta
acaagaaaagcagctgcacagcaacttggggaggtggtgaaactccatccccatgaactg
aataatcttttatctaaagtgttaatatacttaagaagtacaaattgggatactcgcatt
gctgctggccaggctgttgaagcaatagtgaaaaatgtacccgagtggaagccaactcca
agaccaaaacaagaatctgattcagaaaatcctatggacgattcatgtgccagtgatcgg
ctgcgttttgatagatttgatatctgtcgactgttaaaacatggagcatctcttcttgga
tctgctggtgcagagtttgaggtccaagatgacaaatcaggtgaagttgatcctaaagag
aggatagcacgacaaaggaaactgttacaaaagaaacttggccttgatatgggagctgca
attggaatgaacactgaagacctgttcaatgatgaggatttggactatactcctacttca
gcttcacttgtaaacaaacaacctgtaggtaaaacctcgggctgtttgactgcaaggaat
aatacaactcttcaggctgctgagttgattgattcagaatttcgagctggtatgagcagt
agacaaaagaataaagctaaaagaatggctaagctatttgcaaagcaaagatccagggat
gcaaatgagactaatgagaagagcaatgatagcactgatggggaaccagaagaaaagcgc
agaaaagtagcaaatgttgtcatcaaccagcctgccactgactcaaaagttttggtagac
aatgcaccagaagaggcaaatgaatggcctttagaaagcttttgtgaagaagtatgcaat
gatctttttaacccatcctgggaggttcggcatggtgcaggcactgcgctgagggaaata
cttaaagcacatgggaaaagtggtggcaaaatgggagacagtactgtagaagagatggct
cagcagcatcaggaatggctggaagacttagttattagactcctttgtgtctttgcatta
gacagatttggagactttgtttcagatgaagttgtagcaccagtacgtgagacttgtgct
cagactttgggagtagtattgaaacatatgaatgagactggagttcataaaactgtggat
attctcctgaagttgctcacacaagatcaatgggaagtgagacatggcggtctgctagga
atcaagtatgctttggcagttcgtcaggatatgattaatactttattgcctaaagtcttg
cctgcaataattgaaggtctccaagacctggatgacgatgtccgagctgttgctgcagca
tctttagtaccagtagtggaaagccttgttcaccttcaatcacaaaaggtaccctttatt
cttaatacactgtgggatgctcttctggaattggatgatctgacagcttctacaaacagc
atcatgatccttctttcctcccttctaacttatcctcaggtccaaaaatgcagtatccag
caatccctcaccgttttggttccacgcgtatggccattcttgcatcatactatatcatct
gttcgaaaagcagcattggaaactttatttacgctgttatctacccaagaccagagttct
tcagcctggctaactccgattctgcaagatatgttgaggcacatttttcagttttgtatt
ttagaaagcagccaagatattctggaccttattcacaaggtgtggctggaactgttaaac
aaagcatcagtacaatacgtggtagcagcggcttgcccatggatgggagcctggctctgc
ttaatgatgcagccttctcacttgcctattgatttaaatatgttgctagaagtaaaagcc
agatcaaaggaaaaagcaggtggcaagctgcgtcaaggtcaaacccagaacaaagaagtg
atacaggagtatattgctggtgcagacagcgttacagaagatctggcaaccagggattat
gttgttatgcgagcccgggtgatggcagcaaagttgttaggagcactttgctgctgtatt
tgtgatccaagtgtaaataccgttcctcaagaaataaagccagctgaatcactagctcag
ctactgcttttccatttgaattcgaaatctgccttgcagaggattagtgtcgcgttagta
atctgtgagtgggctgccttgcaaaaggaatgtaaagctgtggccctttctgtgcagcca
cgcttacttggagtcctttctgagcacctctattatgatgaaattgctgttccttttaca
cgaatgcagaatgaatgtaaacagctcatttcatcactagctgatgcacacattgacatt
ggaaacagagtaaactacagtgtgtttacaatagatcaagctaatgaactggttactact
gttttcaatgaagttacatcagtttttaatttaaatcctaatattttacaacaattggac
agtaaacgacaacaagtccaaatgacggttacagaaacaaaccaggaatggcaagtgtta
cagctgcgagtccatacttttgctgcatgtgctgttgtgagcttgcaacgacttccagaa
aaactaaatccggtcataaaacctttaatggaaactgtcaaaaaagaagagaatacactg
gtacaaaactatgcagctttatgtgtagctaagttacttcaacagtgtatatcaagagct
ccatgccccaactcgaagatcataaaaaatctctgcaactctctctgtgtggacccacat
cttactcccttagcagcatgtcctgcgcaacctcaaagcagccatgaaaattctaaagga
cccaactctgagagagatgggatgcaccatactgtcaccaagcacagaggaataattaca
ctgtacagacatcagaaagctgcttttgccatcacaagtaggcgaggtcctacaccaaag
gctccaaaagcccaaattgcagacctgcccacaggcagtagtggaaacatcgccacagaa
cttgatgaggctcaaaagccatatattgtacagaggagaggagctgaatttgccttatct
actatagctaaacatttcggtgctgaaatggtactaggattgccacatctctgggatgct
atggttggtccactaagaaataatactaacctaaacagttttgatcggaagtccttattg
gaaaagggagatgtgtctgctcaggagttggtcaattctctacaggtgtttgaaacaaca
gcagcttcaatggacattcagcttcaccctttgttgatacagcatttgcctcatctttat
atgtgccttcaacatccgagcactgcagtgagacacatggttgctcgttgtgtaggtgtc
atgagcaaaatagctaccatggaaacaatgaatattttgttagagaaggttattccatgg
ctgggagcaatagatgacaataccaaacaagagggtgcaattgaagcacttgcttctgta
atggaacagctagatgttggtattgttccatatattgtccttctagtggtcccagttttg
ggtcgaatgagcgatcagacggacagtgtacgtttcatggctactcagtgctttgcaact
ctaattagactaatgccccttgaggctggcattccagatccaccgaacatgtctgaagaa
ttaatcctactgaaagccaaagagcgccattttctggagcaactattggatggaaaaaaa
ttggaaaactataaaattcctgtcccaatcaaagcagagctcagaaaatatcagcaggat
ggtgtgaattggctggcatttcttaataaatacaaacttcatggaattctttgtgatgat
atgggtttaggaaaaacattgcagtccatttgtattcttgcaggagatcattgcctcagg
gctcaagaatatgcaagaactaaattggtagacagtgttcctcttccatccttggtagtt
tgtcctccaacgcttacaggtcattgggtggatgaagtgagtaaattttgctccaaagag
tatctcaatcctttgcactatacgggacctcccactgaaagagcaagattacaacaccag
gtgaaaaggcacaatctcatagtagcttcatatgacgttgtgcgaaatgatattgatttc
ttcagaaatattaagtttaactactgtattcttgatgaaggccatgtaatcaaaaatgga
aaaacaaaattgtcaaaagcagtaaagcagttgactgccaattataggataattctttct
gggacaccaatccagaataacgttttagagttgtggtcactgtttgacttccttatgcca
ggatttttgggtactgaacgccagtttgcagctcgttatggcaaaccaatattagcaagt
agagatgctcggagttccagtcgagaacaagaggcgggagttcttgcaatggaagcactg
caccgtcaagtattgccatttctattgagaagaatgaaagaggatgtactacaggatctt
ccacccaaaattattcaagattattactgtactctcagttctctacaggttcagctttat
gaagattttgccaagtctcgtgccaaatgtgatgttgatgaaactgtttcatctgcttca
ctgaatgaggagactgaaaggccaaagcttaaagctacaggacatgtgtttcaggcattg
caatatttacgaaaactgtgtaaccatccagcattagtgttaacaacccagcatccagaa
tacaagagaaccacagagcagcttgcagctcataactcatcccttcgagatatccagcat
gcgcctaaactgtctgctttaaaacaactactactagactgtggtttgggaaatggtggc
tcttcagagagtggcacagaagctgttgtggctcagcacaggatacttatcttctgtcag
ctcaagagcatgctggatatagtagaacatgaccttctcaaacctcacttgccctctgtt
acatatttgcgattagatggcagcatacctgctggtcaaaggcattccattgtctcacgg
tttaataatgacccatccatagatgttcttttgcttaccactcatgttggcggactggga
cttaacttaacaggagctgacacagtagtgtttgtggaacatgactggaacccaatgaga
gatctgcaagcaatggatcgagcgcatcgtattgggcagaaacgtgttgtcaatgtgtat
cgcttgataactagaggaactttggaagagaaaattatgggtctgcagaagttcaaaatg
aatattgcaaatacagtgattagccaagagaatgctagcctacaaagcatgggaacagat
caacttcttgacctattcactcttgacaaggatgggaaaagtgaaaaagcagatacttct
tctgggaaagcctctatgaaatcagttcttgaaaatctgggagaactttgggatccagaa
cagtatgattctgaatacagtctagaaagctttatgcattcactcaagtaa
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integrated database retrieval system
