Trachemys scripta elegans (red-eared slider): 117879987
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Entry
117879987 CDS
T07347
Symbol
PHF2
Name
(RefSeq) lysine-specific demethylase PHF2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117879987 (PHF2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117879987 (PHF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
PHD_4
Asparaginase_II
Motif
Other DBs
NCBI-GeneID:
117879987
NCBI-ProteinID:
XP_034631490
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All DBs
Position
7:34130855..34275955
Genome browser
AA seq
1054 aa
AA seq
DB search
MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS
TLKKKRNWHKHDTGQSTEVKPVQNGSQVFIKELRSRTFPSAEDVVVKVTGSQLTTEYLEE
NGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLGKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPASANISLYERWQSAANHSEMFFADQVD
KCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKIVSL
TQFPNFETACWYMGKHLLETFKGLHKAGQQPPSHLVQGAKILNGAFRSWTKKQALADHED
ELPEHFKPAQLIKDLAKEIRLSENAFKVNKTEVSANVKVEEICPVEKQEVPSPVPVTPPP
PPVEKVPKKKTPKAVKTPKPPKPPKPPKPPKPPKTPKVKGEGKKKGKKVKENPPPAIPNL
DLLEAHTKEALTKIETPKKGKAAKNVLSVPNKEVVNKQNEVEKFEIREHNKSKTEAKWKY
KNSKPDSLLKMEEEHKLEKTPLSGNKDNKFTFSFSNKKLLGSKGVKTQLNPGVFGSLQNF
KEDKTKPVRDEYEYVSDDGELKIDEFPIRRKKNTMKRDLPFLSDKKETLQHTPVKKPKVE
SELYKTDESSDEDSLHIDTEAKPGRNSKVKKESGSSAGILDLLQASKEVGGLEYNTNSQP
PASPSTQEAIQGMLSMANLQSSDSCLQTSWSTNQAKNNSISAQNSKKPGSSNNKNAGKHL
LKKSTKNSIDIEDYDDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSSDDAPYSP
TARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKGKKKKNTKKKLSPNNTNK
LSQEGSSPEPKLESHASSLADHEYTAGASTFGVAQVNRGSQPMAPGVFLTQRRPSSSSQN
NGAAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtgcccgtctattgcatctgcaggctgccctacgacgtaacccgcttcatg
atcgagtgcgatgcctgcaaggactggttccacggcagttgtgttggcgtagaagaagag
gaggcaccagatattgacatctatcattgtccgaattgtgagaaaacccatggaaagtct
actttgaaaaagaaaagaaattggcataaacatgataccgggcagtcaacagaggtcaaa
cccgtacagaatgggagtcaagtctttataaaggaacttcgaagtcgaactttcccaagt
gctgaagatgtggtagtcaaagtgaccggaagccagctaacaacagagtacttggaagaa
aatggattcacagaacctatcctggttccgaagaaggatggcttgggcttagcggtaccc
gcacctacattctacgtcagcgacgttgaaaactacgtcggaccagaaagaagtgttgat
gtcactgatgtcaccaaacagaaagactgtaagatgaagctgaaggagtttgttgattac
tactacagtaccaacaggaaaagagttctcaatgtaactaacttggaattttcagataca
agaatgtccagttttgtagaaccaccagacattgttaaaaagctgtcttgggtggagaat
tattggcccgatgatgctctgctgggaaaaccaaaagtgaccaagtactgcctgatatgc
gtgaaggacagctacacagattttcacatagactctggaggggcatcggcttggtaccac
gtgctgaaaggagaaaagatattttatctcatcaaaccggcctctgcaaacatttccctg
tatgaacgctggcagtcagcagcaaatcacagtgagatgttttttgcagaccaagtggat
aaatgttacaaatgcacagttaagcaaggacaaacgctctttatcccatcaggttggatt
tatgcaactctcacacctgtagactgcctagcatttgcgggacattttctacatagccta
agtgttgaaatgcagatgagagcgtacgaagtggaaaggcggttgaaaattgtcagccta
acccagtttccaaactttgaaacggcatgttggtatatgggaaagcatctgctggagaca
ttcaaaggtttgcacaaagctgggcagcagcctccttctcatttagtccaaggggcaaaa
attttgaatggtgctttcaggtcatggactaaaaaacaggctctagccgaccatgaagat
gaacttccggaacattttaaaccagcacaacttatcaaggaccttgccaaagaaataaga
ttaagtgagaatgctttcaaagtcaacaaaacagaagtgagtgccaatgtgaaagtagag
gaaatctgtcctgtggagaagcaggaagtgccgtcgcctgtaccagtgactccccctccg
ccacccgtagaaaaagttccgaaaaaaaagactccaaaagctgtgaaaacccccaaaccc
cctaaaccgcccaagccccccaaacctcccaaaccgcccaaaactccaaaagtcaaggga
gaagggaagaagaaaggaaagaaggtaaaggaaaacccgccacccgccattccaaatctg
gacctgctggaggcgcacacgaaagaggctttgacaaaaattgaaacaccaaagaagggg
aaggctgcaaagaatgttttaagtgttcccaataaggaagttgttaataagcaaaatgag
gtggagaaatttgaaattcgagagcacaataagagcaaaacggaagccaaatggaaatac
aagaacagtaaaccagattcattattaaaaatggaagaggaacacaaattggaaaagaca
cctttatcaggaaataaggacaataaatttacattttctttctctaacaagaaactgctc
ggttccaagggagtcaaaacccagttgaatcctggtgtgtttgggtcactgcaaaatttt
aaagaagataaaacaaaacctgtgcgagatgaatatgagtatgtatcagatgatggcgaa
ctgaaaattgatgaatttccaattagaagaaagaaaaacactatgaagagagatttacct
tttttatcagataaaaaagaaacgctacaacacacaccagttaagaagccaaaggtggaa
tcagaattgtataagactgatgagtcatcagatgaagattcgcttcacattgacacagag
gcaaagccaggccgcaactccaaagtgaagaaagagagtggaagttcagcaggaattcta
gatcttttgcaggcgagcaaggaagttgggggtttagagtataacaccaacagtcagcca
cctgcatctcccagcacacaggaagcaatccaaggaatgttatcaatggcaaatctccag
tcttctgactcctgcctgcagacttcatggagtaccaaccaagctaaaaataactctatc
tcagcccaaaactcaaaaaaacccgggagcagtaacaacaaaaatgcaggcaagcactta
ctgaagaagagcacaaaaaacagcattgacattgaagactacgatgaccaggaccactta
gatgcctgttttaaagattctgattatgtttacccatctttggaatccgatgaagataat
ccagtattcaaatcacgatcaaagaaaagaaaaagttctgatgatgccccctacagcccg
acagcaagagttggtccctcagtaccccgacaagacagacctgtccgagagggtacaaga
gttgcctccattgaaactggactggcggcagcagcggccaaattatcccagcaggaggaa
caaaaaggcaagaagaagaagaataccaaaaagaagttgtcccccaacaacacaaataaa
ctctctcaggaaggcagctctcctgaacccaaattggagtcccatgccagcagcctagca
gatcatgaatacactgccggagcaagcacgtttggggtcgcccaagtaaacagaggctct
caacctatggcacctggagttttcctcacccagaggagaccctcatcatcatcacagaat
aatggagctgccaaaggaaaacgtacaaaaaagggcatggctactgcaaaacagaggctt
gggaagattttgaaaatccatcggaatgggaaacttctcctttaa
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