Trachemys scripta elegans (red-eared slider): 117880119
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Entry
117880119 CDS
T07347
Symbol
SAMD8
Name
(RefSeq) sphingomyelin synthase-related protein 1 isoform X1
KO
K22697
phosphatidylethanolamine phospholipase C [EC:
3.1.4.62
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117880119 (SAMD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117880119 (SAMD8)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.62 phosphatidylethanolamine phospholipase C
117880119 (SAMD8)
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117880119 (SAMD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP2_C
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117880119
NCBI-ProteinID:
XP_034631759
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All DBs
Position
7:63190896..63225016
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AA seq
468 aa
AA seq
DB search
MGQPAARERASLRRRVARTVPRGGYDPAVRTAQVNSMHLHRAPPKSVDAVESKTMAGNNQ
LCIRRWTTKNVAKWLKEEGFCEYVDVLCNRHRLDGITLLTLTEYDLRSPPLEIKVLGDIK
RLMLSIRKLQKQHIEVLEELGYNSDSPIGTMSPTVGSLQDTDWFCNGEVPRDCGPVTDLN
ADQYQYTNGKNKHPMRRLDPEYWKTVLSCIYVFIVFGFTSFVMVIVHERVPDMQTYPPLP
DIFLDSVPRIPWAFAMTEVCGVILCYIWLLVLLLHRHRSILLRRLCSLMGTVFLLRCFTM
FVTSLSVPGQHLQCSGKLYGNVWAKLQRAFAIWSGFGMTLTGVHTCGDYMFSGHTVVLTM
LNFFVTEYTPRSWNFLHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYYHTLA
NTRAYQQSRRARIWFPMFSFFECNVNGTVPNEYCWPFSKPTIMRRLIG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaccagccgcccgggaacgggcctctctacgtcgccgggtcgcgcgcacggtc
ccgcggggaggctatgaccctgcagtaaggactgcgcaagtgaactccatgcacctgcat
agagccccaccgaagtcagtggatgctgtagagagtaagacaatggcaggcaacaaccag
ctttgcatccgacgttggactactaagaacgtagccaaatggctaaaggaagaaggcttc
tgcgagtatgtggacgttttgtgcaatagacacagactggatggaattacattattgaca
ctgactgaatatgatttgcgatctcctcctttggaaatcaaagtcctgggggatatcaaa
agactaatgttgtcaatacgcaaattgcagaaacagcatattgaggttttagaagagttg
ggttacaacagcgatagtcccattggcacaatgtctcctaccgttggatcccttcaagat
acggattggttttgtaatggtgaagtaccacgggactgtggaccagttactgacctgaat
gctgatcagtatcaatacacaaatggaaaaaacaaacatcctatgcgaagactggaccct
gagtactggaaaacagtcttaagttgtatatatgttttcatagtgtttggctttacatca
tttgtcatggttatagtacatgagcgcgtacctgacatgcagacatatccaccgctacca
gacatatttctagacagtgttcctaggataccttgggcctttgccatgactgaagtgtgt
ggtgtgattctctgctacatttggctcctggttctcctccttcacagacacaggtctata
ctcttacgcagattgtgtagcttaatggggacagtgttcttgttgcgttgctttacaatg
tttgttacctcactctctgtgccaggccagcatctgcaatgttccggaaagttgtatggc
aacgtgtgggcaaaacttcagcgagcatttgcaatatggagtggttttggaatgacactc
actggagtacatacatgtggagactacatgttcagtggccatactgttgtcctgactatg
ctgaacttctttgtcactgaatatacaccaagaagctggaacttcttgcatactttatcc
tgggtcctgaatctctttggaatcttcttcattttggctgcacatgaacattattctata
gatgtcttcattgccttctacatcaccacaagactctttttgtactaccacacattggct
aataccagagcatatcagcagagtaggagagcgagaatctggtttccaatgttttctttt
tttgaatgcaatgttaatggtacagttcctaatgagtattgctggcccttttcaaaacct
acaataatgagaaggttaattggatga
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