Trachemys scripta elegans (red-eared slider): 117880171
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Entry
117880171 CDS
T07347
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04110
Cell cycle
tst04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117880171 (SMC3)
04114 Oocyte meiosis
117880171 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117880171 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tst00535
]
117880171 (SMC3)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117880171 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
117880171 (SMC3)
Proteoglycans [BR:
tst00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117880171 (SMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
117880171
NCBI-ProteinID:
XP_034631909
LinkDB
All DBs
Position
7:complement(117971192..118019206)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLDDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKDLQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgatcattcagggatttcgaagctacagagatcaaactattgta
gatcctttcagttcaaaacacaatgtcattgtgggaagaaatggatctgggaaaagtaac
tttttctatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agattggctttgttgcatgaaggcacaggtcctcgtgttatttcagcatttgtggaaatt
atttttgacaactcagacaacaggttacctattgataaagaggaagtttcgcttcgcaga
gttattggagccaaaaaggaccaatatttcttagacaagaaaatggtgacgaaaaacgat
gtgatgaaccttcttgaaagtgctgggttttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggcaacagctcctgactctcagagattgaagttgttaaga
gaagtagctggtactagagtatatgatgagcgcaaagaagaaagtatttccttaatgaaa
gaaaccgagggtaaacgagagaaaatcaatgagttgttgaagtacattgaagagcgatta
cataccctggaagaggagaaagaagagctagctcagtatcagaagtgggataaaatgagg
agagcattagaatacaccatttataaccaggaactcaatgaaacacgtgctaaacttgat
gagctttctgccaaacgagagacaagtggagagaaatcaaggcagttgagagatgcacaa
caagatgctagagataaaatggaggatattgaacgacaagttcgagaactaaaaacaaag
atttcagcgatgaaagaggagaaggaacaactcagtgctgagagacaggagcagattaag
cagaggaccaaattagaacttaaagctaaggacttgcaagacgaactagctggcaacagt
gaacaaaggaaaagactgttaaaggagagacagaagcttcttgagaaaattgaggagaag
cagaaagagctagcagaaacggaacccaaattcaacagtgtaaaagaaaaagaagagcga
ggaattgctagactagcacaagctacccaggaaagaacagatctttatgcaaaacaaggc
cgaggaagccagtttacttccaaagaagaaagggataagtggattaaaaaggaactcaag
tctctagatcaggcaatcaatgacaaaaaacgacagattgcagcaatacacaaagattta
gaagatacagaggctaataaagagaagaatctggagcaatacagtaaattggaccaagat
cttaatgaagttaaagctcgtgtcgaagaactggacagaaagtattatgaggtgaaaaac
aaaaaagatgaactacagagtgaaagaaattatctgtggagagaggagaatgctgaacaa
caagctcttgctgcaaaacgagaggatttggagaagaaacagcaacttcttagagcagca
acaggaaaggccattctaaatggtatagacagcataaacaaagtcttggagcactttcgc
cggaaaggcataaaccaacatgttctaaatggttaccatggaattgtgatgaataatttt
gagtgtgagcctgctttctacacttgtgttgaagttactgcagggaacaggttattttat
catattgtggattccgatgaggtcagtacaaagatcttaatggagtttaataaaatgaac
cttcctggagaagtaacttttctgcctctcaacaagctggatgttagagatactgcttac
cctgaaaccaatgacgctattcctatgatcagtaaactgagatacaatcccagatttgac
aaagccttcaaacatgtttttggaaagactcttatttgtcgtagcatggaggtgtctacc
cagttggccagagctttcactatggattgtattactttggaaggtgatcaagtcagccat
cgtggtgctctgactggaggttattatgacacaagaaagtctcggcttgaactgcaaaaa
gatgttagaaaggcagaagaagaacttggtgaacttgaagcaaaactcaatgaaaacttg
cgcagaaacattgaaaggattaataatgaaattgaccaactgatgaatcaaatgcagcaa
attgagacccaacagagaaaattcaaagcttcccgagacagcatcttgtcagaaatgaaa
atgctgaaagagaagagacagcagtctgaaaaaacctttatgccaaagcaacgcagcttg
caaagcttggaggcaagcttacatgccatggaatcaactcgagaatcgttaaaagcagaa
ttgggaacagacttgctgtctcagctcagcctagatgatcagaaacgagtggatgcactt
aatgatgagattcgacaactgcaacaagaaaacagacagcttttgaatgagaggattaaa
ctggaaggcatcatcacaagagtagagacatacctcaatgagaatctcagaaaacgctta
gaccaagtggaacaagaattgaatgagctacgagagacagaaggcggcactgttcttact
gccacaacatcagaactcgaggccatcaacaaacgagtgaaggataccttggcacgatca
gatgatctggataactcaattgacaaaacagaagcagggattaaagacctccaaaaaagt
atggaacgctggaagaacatggagaaggaacacatggatgcaattaaccatgacacaaaa
gaacttgaaaagatgacaaatcggcaaggcatgcttctcaagaagaaggaggaatgcatg
aagaaaatcagagaattgggctcacttccacaggaggcctttgaaaaatatcagacattg
agtttaaaacagttattccgtaagctggagcagtgcaacacagagctgaaaaaatacagc
catgtcaataaaaaagctttagaccagtttgttaacttctcagagcagaaggagaagctg
ataaaacgacaggaggagctggataggggctacaaatctattatggagctgatgaatgtc
cttgaactcagaaaatatgaagctatccagcttactttcaaacaggtgtcaaaaaacttc
agtgaggtgttccagaagttagtacctggtggcaaagccacgctagtgatgaagaaagga
gatgtggagggcagtcaatcccaggatgagggtgaaggcagtgctgagagcgagagggga
tctggatctcagagcagtgtgccatctgtagaccagttcacaggagttgggattagggtg
tcatttacaggaaaacagggtgaaatgagagaaatgcagcaactttcaggtggacagaag
tccttggtggccctagctctgatttttgctatccagaaatgtgatccagctcctttttac
ctgtttgatgaaattgaccaagctctggatgctcagcacagaaaggctgtttcagatatg
attatggaactagctgaacatgcccagtttattacaacaacttttaggcctgaactgctt
gagtcggctgataagttctatggtgtaaaattcagaaacaaggttagtcatattgatgtg
atcacagcagagatggccaaagactttgtggaagatgacaccactcatggttaa
DBGET
integrated database retrieval system
