Trachemys scripta elegans (red-eared slider): 117880196
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Entry
117880196 CDS
T07347
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04141
Protein processing in endoplasmic reticulum
tst04210
Apoptosis
tst04217
Necroptosis
tst04218
Cellular senescence
tst04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117880196 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117880196 (CAPN1)
04217 Necroptosis
117880196 (CAPN1)
04218 Cellular senescence
117880196 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117880196 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117880196 (CAPN1)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
117880196 (CAPN1)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C2: calpain family
117880196 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
117880196
NCBI-ProteinID:
XP_034632012
LinkDB
All DBs
Position
7:complement(31617554..31672743)
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AA seq
714 aa
AA seq
DB search
MAEEIITPVYCTGVSAQVQKQRAKDLGLGQHENAVKYLGQDFEKLRNACLQSGALFRDDT
FPPAAASLGFKELGPNSSKTYGIKWKRPMEMCSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNETILHRVVPHGQSFQNGYAGIFHFQIWQFGEWVDVVVDDLLPTKDGKLAFVHS
AQGNEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWYELRKPPSDLYQIILK
ALERGSLLGCSIDITSALDMEAVTFKKLVKGHAYSVTGAKQINYRGQSVNLIRMRNPWGE
VEWTGAWSDNSSEWNVVDPSVGQQLRIKMEDGEFWMSFQDFLREFTRLEICNLTPDALKA
RTFRKWNTTLYDGTWRRGSTAGGCRNFPATFWINPQFKIRLEEVDDNDDDYSRESGCSFL
LALMQKHRRRERQYGKDMETIGFAVYEVPREFVGQSAVHLKRDFFLANASRARSEQFINL
REVSTRFKLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDQIQANLPDEKVLSE
SEIDDSFKQLFKQLAGADMEISVSELQTILNKIISKHKDLRTKGFSTESCRSMVNLMDRD
GNGKLGLVEFNILWNKIRSYLVVFRKFDLDKSGCMSAYEMRMALESAGFKLNKKLYELII
TRYSEPDLAVDFDNFVCCLVRLETMFRFFQSLDTDKDGIVTFDLFKWLQLTMFA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaatcatcaccccagtgtattgcacaggcgtctccgctcaggtccagaag
cagagggctaaggatctaggcctggggcagcatgagaatgcagtgaagtacttgggccag
gactttgagaagcttcggaatgcatgcttacagagtggagccctcttccgagatgacacc
ttccctcctgcagccgcctccttgggcttcaaagaattgggtccaaactcctccaaaacc
tatggaatcaagtggaagagacccatggaaatgtgttccaacccgcagttcattgttgat
ggagccacccgcacagacatctgccagggagcgctcggtgactgctggctcttagctgca
attgcttctctcaccttgaatgaaaccatcctccatcgagtggtcccccatgggcagagc
ttccagaatggatatgctggcatcttccacttccagatctggcagtttggggagtgggtg
gacgttgtagtggacgatcttctcccgacgaaggatgggaagctggcttttgtacactca
gcacaaggcaatgagttttggagtgccctactcgagaaagcttatgccaaggtgaatggc
tgctatgaagctctgtctggaggaagcacctcagagggctttgaagacttcactggaggg
gtcaccgaatggtacgagcttcggaaaccccccagtgacctttaccaaattattttgaaa
gctctggaaaggggatctctgcttggctgctccattgatattaccagtgctttggacatg
gaggctgtaacatttaaaaagctggtgaagggtcatgcctattcggtcacaggagccaaa
cagattaactaccgaggacagagtgttaatctaattcgaatgcgaaacccatggggagag
gtggaatggactggagcctggagtgataactcttctgagtggaacgtggtggacccctct
gtgggacagcagctaaggattaaaatggaagatggggaattctggatgtccttccaagat
tttttgagagagttcacacggctggagatctgtaaccttactccagatgcactgaaagcg
cgcaccttccgcaagtggaacacaacactctatgatggcacctggagacgggggagcaca
gctggaggctgcaggaattttccagctactttctggataaaccctcagtttaaaatccga
ctggaagaggtggatgataatgatgatgactacagcagagaatcgggctgcagctttctc
ctggcactcatgcagaagcaccgtcgcagggaaaggcaatatgggaaggacatggagacc
attggctttgctgtctatgaggttcctcgtgagtttgtaggccagtctgcagttcacctg
aaacgagatttcttcctggcaaatgcctcacgagctcgctcggagcagttcataaacctt
cgtgaagtcagcacgcgcttcaagttgcctccaggggagtatattgttgtgccttccacc
ttcgaacctaacaaggaaggagattttgtcctgagggtcttctcagagaaaaaagctgga
actgaggagatggatgatcagatccaggctaatcttccagatgagaaagtgctttctgaa
agtgagattgatgacagtttcaagcaacttttcaagcagcttgctggagcggatatggaa
atcagtgtctcagaactgcagactatcctcaacaaaatcataagtaaacataaagacctc
cggactaaagggttcagtactgagtcatgccgaagtatggtgaacctcatggatagagat
ggaaatgggaaattaggactggtggaattcaacatcctctggaacaaaattaggagttac
ctggttgtctttaggaagtttgatttagacaagtctggatgcatgagtgcctatgaaatg
cgaatggcgctggagtctgcaggctttaaactgaacaagaaactgtatgaattgatcatc
acccgttattctgagcctgacttggctgttgactttgataactttgtgtgctgtttagtg
cgacttgaaaccatgttcaggttttttcaatctctggacacagataaagatggaattgtc
acttttgacttatttaagtggttacagctaaccatgtttgcttga
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integrated database retrieval system
