Trachemys scripta elegans (red-eared slider): 117880352
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Entry
117880352 CDS
T07347
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117880352 (SHQ1)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
117880352 (SHQ1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
CS
Motif
Other DBs
NCBI-GeneID:
117880352
NCBI-ProteinID:
XP_034632341
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All DBs
Position
7:complement(10915362..11012709)
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AA seq
612 aa
AA seq
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MITPAFELSQDPDFLTITINVPYAKVSEFDVYFEGKDFKFYAKPYFLRLTLPGRIVEDGR
EKASYNVDKGIFTVRLPKETSGQYFDGLDMLTALLAQKKSRSAKPLVEEIGTSAELAEEE
EEEEEFDWEIEQTPYHETAESTLHLQCCYGFGNLKSGVFQRLQDELSDVIDVKDPDLTPA
DGRRQKRLDTEAAKFDPDHYLADFFDDVVIQHVLKYKPWWVDAYAKKMASQGRNPQEHVS
QTTFVSLSEEEREQLRKFTNKSYLLDKRTRHQVYFSLIDILLAYCYEICITEGDKNVESS
WNIRKLSATLCWLESFTSIPEVLVSFGRRVLCYPLYRHFRLVTRAFSDTIMILQLGKSAV
LKCLLDIHKIFRENDPAYILNDLYITDYCIWIQKTKSKKLAALAESLQKAKLTKAHLGFE
LEELESAALLVQEEESELKAVSSVSKQQLPSSELETSDSEESSSTSSSETESSDSDEQES
STSEDGKINSLQGTLQEERTAPLIDCNGLGRDTDTLTLDVSNEKSKASLQSTSVPGKLIE
ELGKKMQTAIRLSEQPEELATASYTVLQEKGANYAVEPQRLSEDPSGKENFLEVSPKKNL
LLFVGSTNEDED
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgataactccagcatttgaactgagccaggacccagattttcttactataacaatcaat
gtaccttatgccaaagtttcggagtttgatgtatattttgaaggaaaggattttaaattt
tatgctaagccttactttctcaggttaactcttcctggaagaattgtggaagatggaaga
gaaaaagcatcttataacgtggacaaaggcatttttacagttcgactgcctaaggagact
tctggtcagtattttgatgggttggacatgctgacggctctgttagcacagaagaaatct
agatcagctaaaccattagtggaagagataggtacctctgctgagctagccgaggaggag
gaggaagaggaagaatttgactgggaaattgaacagaccccttatcatgaaactgcagaa
agcactttacatttacaatgctgctatgggtttggaaatttgaaatcaggagtgttccag
cgattgcaggatgaactcagtgatgttattgacgttaaggatccagacttaactcctgca
gatggacgcagacagaaacgactggacactgaggctgctaagtttgatcctgatcattat
cttgctgacttttttgacgatgtggtcattcagcatgttttgaagtacaagccctggtgg
gttgatgcttatgcaaaaaagatggcttcccagggaaggaatcctcaggaacatgttagt
caaacaacgttcgtctccttgtcagaagaagagagagagcagctgagaaaattcacaaat
aaatcttacctgctagataaaagaacccgtcatcaagtgtatttcagtttaattgatatc
cttctggcatactgctatgaaatttgtattactgaaggagacaaaaatgtcgagtcatca
tggaatatcaggaaactgagtgcaactttgtgctggctcgagagtttcactagtattcct
gaagtcctggtatcctttggaagaagagttttatgttatccactctacagacatttcaga
ttagtgacacgagccttcagtgatacaatcatgatattgcaactaggtaaaagtgctgtt
ttgaaatgtctgttggacattcacaagatttttcgagaaaatgaccctgcctacatcctt
aatgatctctacattacggactactgtatttggattcaaaaaaccaagtcaaaaaagttg
gcagcacttgctgaatccctacagaaagccaaattaactaaggcccatttagggtttgag
ctggaagagttggaatcagctgcacttctggtacaagaggaagaaagtgagttaaaagct
gtcagctctgtttccaagcaacagctgccttcctctgaattggagacgagtgactctgaa
gaatcaagcagtacttcatcatctgagacagaaagctctgattcagatgaacaagagtcc
tcaaccagtgaagatgggaaaataaattctctacaaggcacactccaagaggagaggaca
gccccacttattgactgcaatggattagggcgagacacagacactttgacgttagatgtt
agtaatgaaaaatcgaaggcttctttacaatctacatctgttcctggaaaactgatagag
gaattaggaaagaaaatgcagactgcaattaggctttcagaacagcccgaagaattggct
actgcgagctacacagttttgcaagagaaaggagcaaattatgcagttgaaccccaaaga
ctttctgaggatccaagtggaaaagaaaatttcttggaggtttccccaaagaaaaaccta
ctgctgtttgttggcagcacaaatgaagatgaagactaa
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