Trachemys scripta elegans (red-eared slider): 117880421
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Entry
117880421 CDS
T07347
Symbol
CATSPER1
Name
(RefSeq) cation channel sperm-associated protein 1
KO
K16889
cation channel sperm-associated protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117880421 (CATSPER1)
04040 Ion channels [BR:
tst04040
]
117880421 (CATSPER1)
Cilium and associated proteins [BR:
tst03037
]
Motile cilia and associated proteins
Sperm associated proteins
117880421 (CATSPER1)
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
117880421 (CATSPER1)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117880421
NCBI-ProteinID:
XP_034632472
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Position
7:complement(33296568..33308101)
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AA seq
426 aa
AA seq
DB search
MDYLTVPVVSGIQMEKPPYKEEMPPVSQASLQATSASSHPTKILKGKQDPRQGRKWRGTM
VLLRLAWERTLPRLLTLRAIIHKLTHLLAFELFILTVVFIHTAVLVVQTFAAVQVRGEWF
FSVMDAVFLCVYVLEALLKLIALDLDYFRNPWNDIDFFVMIMMVLDFVLPLLISPGHNTH
ENAVSLFRVLRVFKGVRAVRVFRLLLTLRVLENLQELTSTFALSGPSIGAILLLMFTCLF
MFSVVLHDLFQNSDPHRFGELFDTIFTLFQLFTLDDWSFIYLDSVQGGASYIIFFLMAYI
LIEYFTFLNLVIAVLVDNFQLTLIKRQELQKQKSLLQPKESSIEDIVSGKPVQEGHMKLE
DDEFFLAQLNKHMDGSESREKQLLFTYLQLMASVEHLQQQFRSQAATTDKIVDSFFETAE
QDFPHH
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggactacctgactgtgcctgttgtgtccggcatccagatggagaagcctccatacaaa
gaggagatgccccctgtctcccaggcctccttgcaagccacctcggcctcctcccacccc
acgaagatattgaaagggaagcaggacccccggcaggggcggaagtggaggggcaccatg
gtcctcctgcgcctggcgtgggagaggaccttgccccggctgctgaccctgcgggccatc
atccacaagctcactcatctgctggccttcgaactcttcatcctcactgtggttttcatc
cacacggcagtgctggtggtgcagaccttcgccgcggtgcaggtccgtggagagtggttc
ttctctgtcatggacgctgtcttcctgtgtgtgtacgtgctggaggcactgctgaaactc
atcgccctggacctcgactacttccgcaatccctggaatgacattgattttttcgtcatg
atcatgatggtgctggactttgtgctgccgctcctcatctccccgggccacaacacccac
gagaacgctgtcagcctcttccgcgtgctccgcgtcttcaagggtgtccgggctgtgcgg
gtctttaggctgctgctcacactgcgggtgctggagaacctgcaggagctgacaagcacc
ttcgcgctgtctggcccgtccatcggggccatcctgctgctgatgttcacctgcctcttc
atgttctcggtagtgctgcatgacctgttccagaactctgacccccatcgcttcggggag
ctcttcgacaccatcttcaccctcttccagctcttcacgctagatgactggtccttcatc
tacctggacagtgtccaagggggtgcctcatacattatcttcttcctgatggcctacatc
ctcattgagtacttcaccttccttaacctggtcatcgctgtcctggtggacaatttccag
ttgaccctgatcaagcgccaagagctgcagaagcagaagagtctgctgcagcccaaggag
agcagcatagaagatattgtatcaggcaagccagtccaggagggacacatgaagctggag
gacgatgaattcttcctggctcagctcaacaagcacatggacggcagcgagagcagggag
aagcagctgctcttcacctacctgcagctgatggcgtcagttgagcacctccagcagcag
ttccgctcccaggctgccaccaccgacaagattgtcgacagcttcttcgagacagccgag
caggactttccccaccactga
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