Trachemys scripta elegans (red-eared slider): 117880460
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Entry
117880460 CDS
T07347
Symbol
WNT5A
Name
(RefSeq) protein Wnt-5a
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04150
mTOR signaling pathway
tst04310
Wnt signaling pathway
tst04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117880460 (WNT5A)
04150 mTOR signaling pathway
117880460 (WNT5A)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
117880460 (WNT5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117880460 (WNT5A)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Morphogens
117880460 (WNT5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
117880460
NCBI-ProteinID:
XP_034632575
LinkDB
All DBs
Position
7:26429721..26447442
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AA seq
385 aa
AA seq
DB search
MEKSIGILVQGGALGTVGSAMASKYLIVVLAIFSSFAQVVIEASSWWSLGMNHMNPMNPV
QMSEVYIIGAQPLCSQLAGLSQGQKKLCHLYQDHMQYIGEGAKTGIKECQYQFRHRRWNC
STVDNNSVFGRVMQIGSRETAFTYAVSAAGVVNAMSRACREGELSSCGCSRAARPKDLPR
DWLWGGCGDNIEYGYRFAKEFVDARERERIYQKGSYESARILMNLHNNEAGRRTVYNLAD
VACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAAMKLNSRGKLVQVNSRFNTPT
IHDLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTVQTERC
HCKFHWCCYVKCKKCTEIVDQFVCK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatccattggaatattagttcaaggaggtgctttggggacagttggcagtgca
atggcttccaagtacctcatagtggttctggccattttctcctctttcgcccaggttgta
atagaagccagctcttggtggtctttaggtatgaatcatatgaatcctatgaaccctgtt
cagatgtcagaggtatatataataggagcacagccactatgtagtcaactagcaggactt
tcccaaggacagaagaaactctgccacttgtatcaggaccacatgcagtatattggagag
ggggcaaagacaggcattaaggaatgccagtatcagttcagacacagaagatggaattgc
agcactgtggacaacaactctgtttttggcagagtcatgcaaataggcagtagggagact
gcctttacttatgcagtcagcgctgctggggtggttaatgcaatgagccgcgcctgccga
gagggggagctctcctcctgtggctgcagcagagcggccaggcccaaagatttaccccgg
gactggctgtggggtggctgtggggataacatcgaatatggctaccgcttcgccaaggag
tttgtggatgctcgggagcgtgagagaatttatcagaaaggttcttacgagagtgctagg
attttgatgaacctgcataacaacgaggctggaagacgaactgtgtataacttggctgat
gtggcctgtaagtgccatggggtgtctggctcctgcagcctgaagacctgttggctgcag
ttggctgatttccgcaaagtgggtgatgccctgaaggagaaatatgatagcgctgctgcc
atgaaactcaacagccggggcaagctggtgcaagtgaacagccgcttcaatacgcccacc
atccacgacctggtctacattgaccctagccccgactattgtgtgcgcaatgagagcacc
ggctccctaggcacccagggccgcctctgcaataagacctcagagggcatggacggctgc
gaactcatgtgctgtggccggggctatgaccagttcaagacagtgcagacggagcgctgc
cactgcaagttccattggtgctgctatgtgaaatgcaagaagtgcacagagatcgtggac
cagtttgtgtgcaaatag
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