Trachemys scripta elegans (red-eared slider): 117880555
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Entry
117880555 CDS
T07347
Symbol
TSEN2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2 isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117880555 (TSEN2)
Enzymes [BR:
tst01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
117880555 (TSEN2)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
117880555 (TSEN2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Chlamy_scaf
Motif
Other DBs
NCBI-GeneID:
117880555
NCBI-ProteinID:
XP_034632724
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All DBs
Position
7:complement(37462664..37479667)
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AA seq
476 aa
AA seq
DB search
MAEAVFHAPRRKRRVFESYDSPFPIPASQEDICGKDFKLYQAEIINNNVIVRNPKDIEQL
YSKGYFGKGILSRSRPEYNISDPLLVAKWQDAKINMPILSSKKYQCHLEWAKSLMQEQGL
DDCSVNKILENYTKPFDLPFMKEEGEVAQNDDSYCRMAAEMENVEDGMKLSRDSAINNGD
SAAPNVKCHNMSVDCKKACLEGDSAYNDPLANYGSEELYPLDTKAIVKVRCQKHDDFIVH
CSCKAEDYTNQVFHNLAKGKEYAYEYVLVQEEESKLCHEDEAANDKSNLIKREKLVCRRN
PFRIFEYLQLSLEEAFFLVYALGCLSIYYNEEPLTILKLWEVFSEVQPNFRTTYMAYHFF
RSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVNDNFVGSLRRPLNWMSLSGLNR
TTVNVSKELMLCYLIRPCDMTEKEMSSPDCLKRIKVQELIVNRWVSSRERSEQDEL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagttttccatgctccaagaaggaaaagacgagtgtttgagtcatatgat
tctccattccctattcctgcctcccaggaagacatctgtggaaaggatttcaagttatac
caggctgaaattattaacaacaatgtaattgtgagaaaccccaaagatatagaacagctg
tatagcaagggctattttggaaaaggtattctttcgagaagcagaccagaatacaatatt
tcagaccctttattggttgctaagtggcaagatgccaagataaacatgcccatactctca
tcaaaaaagtaccagtgtcatctagaatgggctaaaagccttatgcaagaacaaggactt
gatgactgctccgttaacaaaattcttgaaaattatactaagccatttgatctgcctttt
atgaaagaggaaggagaagttgcacaaaatgatgactcttactgcagaatggctgcagaa
atggaaaacgtagaagatggaatgaaactttcaagagattctgccataaataatggagat
tcagcagcaccaaatgttaaatgtcataacatgagtgtagactgcaagaaagcttgtttg
gaaggtgattcagcttacaatgatccactagccaactatggctctgaggaactgtatcca
ttggacactaaagctatagttaaagtacgttgccaaaagcatgatgattttattgtgcac
tgtagctgcaaggccgaagattataccaaccaagtatttcataacttggccaaagggaaa
gaatatgcttatgagtatgtattggtgcaggaagaagaaagcaaattgtgtcatgaagat
gaagcagcaaatgataaatcaaatttaatcaaaagggaaaaattagtatgcagaagaaat
ccatttaggatttttgaatatttgcaactcagtctggaggaggcatttttcttggtctat
gctctaggatgtttgagtatttattataacgaggaacctttaactattttgaagctatgg
gaagtttttagtgaagtgcaacctaattttagaactacatacatggcctatcacttcttc
cgaagtaagggatgggtccccaaagtaggactgaagtatggaaccgatctcttgctatat
cgaaaaggtccccccttttaccatgcaagttactcagtcattgctgaactggttaatgac
aactttgtagggtcactgcgcagaccgctcaactggatgtctttgtctggcttgaacaga
acaacagtgaatgtttctaaggaacttatgttatgctatttgattagaccgtgtgatatg
actgagaaagaaatgtcatcaccagactgtctaaaaagaattaaagttcaagaactgatt
gtaaatcgttgggtctcttcccgagagcgcagtgaacaagatgaactataa
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