Trachemys scripta elegans (red-eared slider): 117880560
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Entry
117880560 CDS
T07347
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117880560 (BHLHE40)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
117880560 (BHLHE40)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF1978
KH_DTX3L
Motif
Other DBs
NCBI-GeneID:
117880560
NCBI-ProteinID:
XP_034632738
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Position
7:15417504..15422094
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AA seq
413 aa
AA seq
DB search
MEMIPSAQPPPACLGKLPALESNEMPGLAFSHMYQVYKPRRGLKKSEDNKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIEQQQQKIIA
LQNGLQAGDLSSRNLDTSQEMFQSGFQMCAKEVLQYLGKHENTRDLKSSQLVSHLHRMAS
EVLQGGASRKAGDAPLKTVDLKEKSGSLPKTAEGYGKNCVPVIQRTFAHSSGEQSGSDTD
TDSGYGGELEKSDSNADQQYFPKDTGLNYTMQERISSIKQETEDPPAKRTRMETSEDEGH
FSSDLIGSSSSFLGPHPHQPPLCLPFYLIPPSATAYLPMLEKCWYPASMPVLYPSLPASA
AALSGLMNPDKISPSLLMPQRLPSPLPVHSPIDSSALLQALKQIPPLNLETKD
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgatccccagcgcccagccccctcccgcctgcctgggcaagctgcctgcgctg
gagagcaacgagatgcccgggctggccttttctcacatgtatcaagtgtacaagcccagg
agagggttaaaaaaaagtgaagacaataaggagacctataaattgccccacagactgata
gagaagaagagacgtgataggattaatgagtgcatcgcccaactgaaagatctcttacca
gaacatctcaaacttacaactttaggtcatttggagaaggcggtggttcttgaacttacc
ttgaagcatgtgaaagcactaactaatctcattgagcagcagcaacagaaaataattgct
ttacagaatggtttacaagctggtgacttatcatcgagaaaccttgataccagccaggaa
atgtttcaatctggtttccagatgtgtgccaaggaagtgctgcaatacctgggaaagcat
gagaacaccagggatctgaaatcttctcagctggtcagtcatctgcaccgaatggcctct
gaggttctccagggcggagccagccgaaaagctggagatgcgcccctgaaaacggtggac
ttgaaggagaagtctggctctttgcccaaaactgctgagggttatggcaagaactgtgtg
cctgttatacagaggacttttgcacactccagtggagagcagagcgggagcgacacagac
acagacagtgggtatggaggagagctggagaaaagtgattcaaacgctgatcaacagtat
tttccaaaggatacgggactcaactataccatgcaagagagaataagctctattaagcaa
gagactgaggacccaccagccaaaaggaccagaatggaaacttcagaagacgaaggccat
tttagcagtgatctgattggctcttcaagtagttttttgggccctcaccctcaccagcct
cctttgtgcctgcctttttatttgatcccaccatccgcaactgcctatctgcctatgctg
gagaagtgttggtacccggcttccatgcctgtcttgtacccaagtctcccagcctctgct
gcagcactttcagggctaatgaacccagataaaatctctccatctctcctgatgcctcag
agacttccttctccactaccagtccattcccctatcgactcctcagctctgcttcaagct
ttgaagcagattcctcctttgaacttggaaaccaaagactaa
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