Trachemys scripta elegans (red-eared slider): 117880605
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Entry
117880605 CDS
T07347
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117880605 (CFAP43)
Cilium and associated proteins [BR:
tst03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
117880605 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
CFAP43_N
Beta-prop_RIG_2nd
Beta-prop_HPS5
YPEH2ZP
DUF7607
Motif
Other DBs
NCBI-GeneID:
117880605
NCBI-ProteinID:
XP_034632809
LinkDB
All DBs
Position
7:121148075..121241021
Genome browser
AA seq
1699 aa
AA seq
DB search
MESDAENGEELDNGRRRARGADLEMRWVQGFTNRNVGFVNNKTICYPCGNYILFVDIETK
KTTVLKCKNGHIGAFAVNGNSQVVAFSDQKLNPVIYIYTFPGLVKRSEIKGKAQLDYSLL
AFSYMGPYLASYSSVPEFALSIWDWQENILLCSKSQPGVKVTSMSFNPMNWHQLCLSNEN
SLTVWNIERNDQEHHLKSKPVRLPAEDGSLMCKQDVFFSHPDIQDLYYGPVLPISAIAGL
AGDEAETFRPKDDIQPSVHPTVHCWTATSDLYMGCEEGHFLAINVETLKASLLYYKPSQD
AKERRRTKFRSLPLLSGDSLKKEEDKRRTQKPVLLAMAYHKDGLYAAGSDGIVHFYQIKG
THYQMDDCFDVSEPITSLVFSPDYNTLLVETDKGSVYVYKPSQNEEVIKLLDACNDHFLS
ADFLTPGNKYCVSVAISGEVHVWLLEDGTFISKLCLNTQATAMVCCPSSYSVAVGTKVGH
VYFIDVTKVETPRVVHRVLLSNLPVRHLQYDQSGQYLITGAAEGHIFILDARPSKLFQVL
GYLVMSSEVLGLSAIYDVESELVEVMALLCPPDIRRARLEIFCLPSAITIDNDECIDERG
MLKNRVIQKRQYELDYPLSSAVRQKDDTVYGYCNHAPFICKYHLAKKKTWKDASVTLSEK
KIPSNQFAPGFLHFSPNSQLLASVAKDGVLFIRDAVTLETVAREHCHSYQGQGIGSLAFS
LDGQFILVSGVNDGTLVCLKWKTGDDEIKEATDYWRLILAILNNSIYSENTVLKSMAEWN
IATESLLESSLEKESQEMPQKKPSVEVTDEDSYHNLNILSTDEMTWLNQKVQKAIKEEIK
KFADKRKELKKGIKKLRKTIQEMMYENEQVPDIERLDQQEFNLDIEEQERLQAESEQEVA
RVRKEIEMENLAKCYLRDIIKKECWDSMSIKGRAIKCFHAAYKVTNYPMKERSKEELEAL
ERVLQLKKIESADLKIRKEIVEFQSQAVPPKEEGEKVEEEAVTDESTSNSLIGSLSAQFG
GDTSILYHQMDLHTREEKINQIILLQDIIYKVKTAFNKEFDTVARQKEQEIARVKERNLR
IQEIVEQLELQEVVWEPALTDDEIPEHALTVQDSEIKVEKYLTPQQRAKAEMMAKIEMER
RLAALNSARQRALYDMMGGVLEVKKEDILKIEIPPPPFVSKPDALWNEEEKKVFKEYEKK
VKELNEEREKYRKTLETELKKLQTSIQETTQNFDDTVSKLFERKVKSEMVIYQEELKINN
LLYSLLLDEELSTREAGLNHFLDKKRKEKLSTAEEVQVVRAQVDAYRETYDNLAAEDKIL
ERGFKKEFSDVPVHHIDHLFKLYKRRPRAQKIKMHLDTANPYGDRPGSARAYKEALAHLM
KAIDEMDDPENMPEGLDLPVWERFCLARRTKVEGEQLVKRKALTLAEMQAFLQKRMDDDE
KIRMDIEKILNELNMLREEKMRFQLDLTVQFLLKQGQVELESAAELIPDYTDAILLHKSV
IEELNCTIRAQGEKKIASMVESKDFSKGIFQLEWEHKKMKMLMEDLNQRARDIQNLHVSR
DRQLFLRILNYDSHITQQVSVMEQTLGVMDKLHKKNVKNYQKVFKDLEKRICLKEQANYK
LSQELQEILVSVSERRHIFEAADTQLVSEKAAKEHYQDIVQRRQLVDLAKEQAQEISVLQ
AEVERLRMRTFPALFEMEY
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggacgcggagaatggggaggagttggataacggccgccgccgcgccagggga
gccgacctggaaatgagatgggttcagggattcacaaacaggaatgttggttttgtcaat
aacaagactatctgctatccctgtggcaactacatcctttttgttgacattgaaacaaag
aagacgacagtgctgaagtgtaagaatggccacattggagcctttgcagtgaatgggaac
agtcaagtggtggctttttcagaccagaagctaaatcctgtcatctatatctacactttt
ccaggactcgttaaacggtcagaaataaaagggaaggcacagctggactactctttactt
gcattcagttacatgggtccttatctggccagttactcttcagtcccagaatttgctctt
tcaatatgggactggcaagaaaatatccttttgtgcagtaaatctcaaccaggtgtgaaa
gtgacctctatgagctttaaccccatgaactggcaccagctttgtttgtccaatgaaaac
tccctgactgtctggaatattgaaaggaacgatcaagaacatcatctcaagtcaaagcct
gtcagactccctgccgaagatgggtctctgatgtgtaaacaggatgtctttttttcacat
cctgatatccaagacctctactatgggcctgtgctgccaatttcagcaattgctgggctg
gcaggggatgaagcagagacatttaggcctaaagatgacatccagccttcagtccaccct
accgtccactgctggactgcaacgtctgacctgtatatgggctgtgaagagggacatttt
ttggcaattaatgttgagacactcaaagcttctcttctttattacaaaccttcacaagac
gctaaagaacgaaggcgaacaaaatttcgttccttaccacttctttctggcgatagtttg
aaaaaggaagaagacaaacggagaacacaaaaacctgttctgcttgccatggcatatcat
aaggatggactatatgcagctggaagtgatggtattgtgcacttttaccaaatcaaaggc
acacactatcagatggatgattgctttgatgtatcagaacccataaccagcctcgttttc
tcccctgactacaacacattactagtagaaacagacaagggatcagtctatgtctataaa
ccttctcagaatgaggaagtcatcaaactcttggatgcatgcaatgatcatttcctgtca
gctgattttcttactccagggaataagtattgtgtgtctgtagcaatttcaggggaagtg
catgtttggctgctggaggacggaactttcataagcaagctctgcctgaatacacaggca
actgctatggtctgctgcccctcctcatatagtgttgctgtggggaccaaagtgggtcat
gtctatttcattgatgttaccaaagttgaaacgccacgtgtggttcacagagttcttctt
tccaacttacctgtgcgccatctgcaatatgatcagagtggtcagtacctcataactgga
gctgcagaaggacatatctttattttagatgctcggccctcaaaattattccaggttctt
ggatacttagtgatgagtagtgaagtcctaggcctttctgcaatatatgatgtggagagt
gaattagttgaggtgatggcacttctttgtccaccagacatcagaagagcaagactggaa
atcttttgtctgccttcagcaattacaatagacaatgatgagtgtattgatgaaagaggg
atgctgaagaaccgtgtcattcagaagcgccagtacgaattagattaccccctgtcctca
gcagtcagacagaaagatgacactgtgtatggctactgcaaccacgcacctttcatctgt
aaataccatcttgccaaaaagaaaacctggaaagatgcgtcagttactttatcagagaag
aagattccaagcaaccagtttgcaccagggttcctccatttttcacctaacagccagctg
ttggcatcagtggctaaggatggagtattgtttatccgtgatgctgttactttggaaaca
gttgctcgggagcattgccattcttaccaaggacagggaattggatcgttggcgttttca
ttggatggccagttcatacttgtcagtggcgtgaatgatggtacccttgtgtgcctgaaa
tggaagactggagacgatgaaattaaggaagctactgattattggcgactcattctcgcc
attctgaacaactcaatttacagtgaaaatactgttttaaagtccatggcggaatggaac
attgctacagagtccctactggaatcatccttggaaaaggaatctcaggaaatgccccag
aagaaaccaagtgtggaggtgacggatgaagatagctaccacaacctgaacatactcagt
actgatgaaatgacatggctcaaccagaaagttcagaaggccatcaaagaagagatcaag
aagtttgctgacaagaggaaagaactgaaaaaaggaattaaaaagctccgtaaaactatt
caggaaatgatgtatgaaaatgaacaggtgcctgatattgaaagactggaccagcaggaa
ttcaacctggacatcgaagaacaggaaaggctgcaggcggagagtgaacaagaagtggcc
agggtaaggaaggagattgagatggagaatctagccaaatgctatctgcgtgacatcatc
aaaaaggaatgctgggactccatgtccataaaaggtcgtgcaattaagtgcttccatgca
gcctataaggtgacgaattacccaatgaaagaacgtagtaaagaagagttggaagccttg
gaaagggtactgcagttaaagaagattgagtcagctgatcttaagattcggaaggagatt
gttgagtttcagtctcaggctgtaccacctaaggaggaaggggagaaggtggaagaagaa
gctgtgactgatgagagcacctccaattccctgatcgggagcctgagtgctcagtttggg
ggagacacctccattttgtaccaccaaatggacctgcacaccagggaggagaagattaat
cagatcatattactgcaggacatcatttacaaagtgaagactgcctttaataaggagttt
gataccgttgctcgacagaaggagcaggagattgcacgtgtaaaggaaaggaacctgagg
atccaagaaatcgtagaacagctcgaactccaggaggtggtctgggagccagctctgaca
gatgatgagataccagagcacgctctcactgtccaggattcagagattaaagttgaaaaa
taccttaccccacagcagagagcaaaagcagagatgatggctaagattgaaatggaaaga
cgtcttgctgctctgaacagtgcaagacaacgtgccctttatgacatgatgggtggggtc
ctagaagtcaaaaaggaagacatcttgaagatagagattcccccacctccttttgtttct
aaacctgatgccctttggaatgaagaagaaaagaaagtattcaaggaatatgagaaaaaa
gttaaggagctgaatgaagaaagggaaaaatacagaaagacactagaaactgaattgaag
aaacttcaaacctccattcaggaaacaacacaaaattttgatgacaccgtaagcaagctc
tttgagcggaaagttaaatcagagatggtcatataccaggaggaactcaaaataaacaac
ctcctttactctttgctgttggatgaagagctgagcacaagagaagctggactgaatcac
ttccttgacaagaagcggaaggagaagctcagtactgcagaggaggtccaggttgtacga
gcacaagttgatgcttacagagagacctatgacaacttagcagctgaagacaaaattctg
gaacgtggctttaaaaaggaattttctgatgtcccagtgcatcacattgatcatcttttc
aaactttacaaacgccgaccaagagcccagaagatcaagatgcaccttgacactgctaac
ccttatggagatcggccaggctcagccagagcttacaaagaggcacttgcccatttaatg
aaagccatagatgaaatggatgatcctgaaaacatgcctgagggattagacctgcctgtc
tgggaacgtttctgtttggctagacgaacaaaagtggaaggcgaacagctggtgaaacgg
aaagccctgacgctagcggagatgcaggcctttctccagaaaaggatggatgatgatgag
aagataaggatggacattgaaaaaattttaaatgaactcaatatgctacgagaggagaag
atgaggtttcaactggatttgactgtccaatttctgcttaaacaaggacaggtggaattg
gagagtgctgctgagctaataccagattatactgacgctattctccttcacaagagtgtt
attgaagaactgaattgcacaatccgggctcaaggagaaaagaaaattgctagcatggtg
gaaagtaaagacttctctaaagggatatttcagctggaatgggaacataaaaaaatgaag
atgctgatggaagatctaaaccagagggctcgggatattcaaaatctgcatgtttcaaga
gatcgccagctattcctacgcatactaaactatgacagccacatcacccaacaggtttca
gtaatggagcagacgcttggtgtgatggataagctgcacaagaagaatgtgaagaactat
cagaaagtatttaaagatctggagaagcgtatctgtttaaaggaacaagcaaactacaaa
ctcagccaggagctgcaagaaatacttgtgtctgtttcagaaaggcggcatatctttgaa
gcagctgacacacagctggtttctgaaaaagccgcaaaggagcattaccaggatattgtg
cagcgacgacagctagtggatcttgcaaaagaacaggcccaagagatttcagttcttcag
gcagaagttgaaaggctgagaatgagaacatttcccgccctttttgaaatggaatattag
DBGET
integrated database retrieval system
