Trachemys scripta elegans (red-eared slider): 117880636
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Entry
117880636 CDS
T07347
Symbol
LRIT1
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117880636 (LRIT1)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117880636 (LRIT1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
fn3
Ig_2
LRR_5
Motif
Other DBs
NCBI-GeneID:
117880636
NCBI-ProteinID:
XP_034632862
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All DBs
Position
7:complement(72554918..72570202)
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AA seq
635 aa
AA seq
DB search
MWITVGLVCCLVFGGLPSAHCTCPSQCSCAFHSINEGTKARTVLCNDPEMTLTPVNIPGD
TSKLRIEKTAIRRVPGEAFHSLRNLEYLWMPYNSLASVSVITFRGLRRLQELRLDGNDLI
LFPWEVLADMPQLRLLDLHNNELTSIPAEAARYIKNITYLDLSSNKLMTLPQELISTWAN
LQAVPYFPNDNSKIILGLQDNPWVCDCSLYEMVHFLNFQSPNIAFIEPRLKCFTPRSLAG
VFFSQVELRKCQSPVVHTSVAKVKTILGSTVLLRCGTTGVPIPELSWRRADGNQLNGTVH
QEISSDGMSWSILGLPVVSYLDSGEYICKAKNFLGATEAFISLIITDSEGTDDPNANSKG
VWNGKVSGMEAAAYNDKLVARYVITTSTSPTLGARPVRVNTEENLGFQNEAQNMVKEQNN
NPRNLLSSLPPGQQEPERIVRSVRVIGDTDQSVSLAWKAPQAKNTTIFSVLYAIFGEREM
RRISVEPGKTKITIDGLMPKTKYIVCVCVKGLIPRKEQCIIFSTDEVASAGGTQKLINVV
VISVACVIAVPLTLVVCCGALKRRCKKCLVRKPKEVQESYVTFESLSPGAKTKGGEGEYL
TRHTPDESNRLLSARSSVDSEAIPKTEGQPNEYFC
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcactgtgggcttggtctgctgcttagtttttggaggactgccttcggctcac
tgcacttgcccttcccaatgtagctgcgccttccatagtatcaatgaaggaacaaaagca
agaactgtgctgtgcaatgacccagagatgacactcacccctgtgaacatcccaggagat
acatctaaacttcgaatagaaaagacggccatcaggagagtaccaggagaagctttccat
tctctccgtaatctggaatacctctggatgccctacaattctttggctagtgtcagtgtg
attacctttaggggtctccgccggttacaggaattgagactggacgggaatgacttaatc
ttatttccatgggaagttcttgcagacatgccccagctacggctgctggatttacacaat
aatgaactcacctcaataccagcagaagctgctcgttacatcaagaacatcacctacttg
gatctgtctagcaataaactgatgactcttcctcaagagcttatttcaacctgggctaac
ctccaggcagttccttacttccccaatgacaattccaagatcatcttaggtttgcaggac
aatccttgggtgtgtgactgcagtctgtatgaaatggtccatttcctaaacttccagtct
cctaacatagcatttatagagccaagactgaaatgctttaccccacggagtcttgctgga
gtcttcttcagtcaagtcgaactaagaaaatgtcaaagccctgttgtacatacttctgta
gccaaagtgaagaccatactgggtagcactgtgttactgcggtgtggtactactggggta
cctattcctgaactcagctggagacgggctgatggtaatcaactcaatggcacagtgcac
caggaaatttctagtgatggaatgagctggtctattctaggcttgcctgtagtctcctat
ctggattctggagagtacatttgtaaagcaaagaacttcctaggggctacagaggctttc
atatccctcatcatcactgattctgaaggcactgatgaccctaatgctaactctaaagga
gtatggaatgggaaggtgagcgggatggaagcagctgcttacaatgataagctggtggct
aggtacgttatcacaacctcaacttcacctacattaggtgccagaccagtccgtgttaac
acagaagagaatctagggttccagaatgaggcacagaatatggtgaaggagcagaataac
aatccaagaaatcttctatcaagtctacctcctggtcaacaggagccggaacgtatagtg
aggtctgtcagagtgataggagacacggatcaaagtgtctcattggcctggaaagctcct
caggcaaagaacacaaccatattcagtgtcctttatgccatttttggagaaagggaaatg
cgcagaatcagtgtggagccaggtaagactaagatcaccattgacgggctgatgccaaag
accaaatacatagtgtgtgtctgtgtgaaagggctgatccccaggaaggagcaatgcatc
atattttccacagatgaagttgccagtgccggtggaacccaaaaactcattaatgtggtg
gtgatcagtgtggcctgtgtcattgctgtgcctctgaccctagtggtctgctgtggggca
ttgaaaaggcgctgcaaaaaatgcttagtgcggaaacccaaggaagttcaggagtcctat
gtcacatttgaaagtctgtctccaggggccaaaactaaaggaggggaaggagaatacttg
actagacacaccccagatgagtctaacagactgctgtctgcacgatctagcgtggactca
gaagcaataccaaagacagaggggcaacccaatgagtacttttgctga
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