Trachemys scripta elegans (red-eared slider): 117880647
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Entry
117880647 CDS
T07347
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117880647 (SORCS3)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Others
Others
117880647 (SORCS3)
Endosome - Lysosome transport
117880647 (SORCS3)
Endosome - Golgi transport
117880647 (SORCS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
117880647
NCBI-ProteinID:
XP_034632887
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All DBs
Position
7:complement(120326832..120788011)
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AA seq
1288 aa
AA seq
DB search
MEKGTGWSPACYIALLAWTWLLLSPWCFTGAEITCRPCSSSSPAPSSPSSRAKQQQEPPP
PPRGPFRWPGSRDVGFAREEALQEEQPGGGWGVGDEDEEEEALVVVLEEDRGWGRVRPAA
GAVEGTWGAGDARRSGAKGDGWAGEAHGKSPSRQRLGMAKGSGAAAAHGLEEMLLPPGDA
QEAGGSLGKVTSSHPLLPRARRSSGAPGQGQAGGGSPWTDGQKVTRTQAKGSKEEGKVTK
MRGGEELKLTSTTFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRST
DYGTTYEKLNDKVGLKTVLSYLYVSPTNKRKIMLLGDPEIESSILISSDEGATYQKYRLN
FYIQSLLFHPKQEDWILAYSLDQKMYSSVDFGRRWQLMHERITPNRFYWSVTGLDKEPDL
VHMEARTADGHAHYITCRIQECSETTRSGPFLRSIDTNSLVVQDEYVFIQVTAGGRANYY
VSYKREPFAQIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLA
LENVKSSRGLEGNIIIDLYEVAGIKGIFLANKKIEDQIKTFITYNKGRDWRLLQAPDTDL
RGGPLHCQLPFCSLHLHLQISENPYTSGSISSKETAPGLVVATGNVGSELSYTDISTFIS
SDAGNSWRQIFEEEYNVWYLDWGGALVAMKHTSMPIRHLWVSFDEGRSWSKYAFTSTPLF
VDGSLVEPGIETQLMTIFGHFSLRSEWQLVKVDYKSIFSRRCNKEDYQTWHLHNQGEPCV
MGERKIYKKRKPGAQCALGRDYSRTVVSEPCVCAEWDFECDYGYERHSNNQCMPAFWFNP
SSLPKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYVAKAEQCPGKAPRGLHVLTTDGKLL
AQQGHNTTFIILMEEGDLQRTNIQLDFGDGIAMSYANFSPIEEGIRHVYKSAGIFQVTAY
AENSLGSDTAVLFLHVVCPVEHVHLNVPFVAIRNKEVNLTAVVWPSQSGTLTYFWWFGNS
TKPLITLESSVSYTFATEGTNTITVQVSAGSALLQDTKDIAVHEYFQSQLLSFSPNLDYH
NPDIPEWRQDISKVIKRALMQVTGILDEQILVAVFPGLPTSAELFILPHKNTTERRKGHE
GDLEQVVELLFNALNQNLVQFELKPGVEVIAYVTQLTLAPLVDSSTGHSSSAMLMLLSVV
FVGLAVFLIYKFKRKIPWVNIYAQVQHDKEQEMIGSVSQSESAPKIALTEFTDPEELMEK
ELDTRVIGSISTIANSESTKEIPNCTSV
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggactggctggtccccagcctgctacatcgctctgctcgcctggacatgg
cttttgctctccccttggtgtttcaccggcgctgaaataacttgcagaccctgctcatct
tcctcgccggcgccttcttcgccctcctcgcgggcgaaacagcagcaggagccgccgccg
ccgcctcggggaccgttccgctggccggggagcagggacgtggggttcgccagggaagaa
gccctccaggaggagcagcccggcggaggatggggggtcggggacgaggacgaagaggag
gaggcgctggttgtggtgctggaagaggaccggggctggggaagggtccggccggctgcg
ggagcggtggaggggacgtggggcgctggggacgctcgcaggagcggggcgaagggggat
ggctgggctggggaggcgcacgggaaatctccgtctagacagcgcttggggatggcgaag
gggagcggagcagcagccgcccatggcctggaggagatgctgctgccgcccggagatgcc
caggaggcaggcggctcgctgggcaaagtgactagctcccaccccctgctgcccagggcg
aggaggagcagcggggcccctggccagggccaggcaggagggggcagcccttggacggac
ggacagaaagtgacccggactcaagccaaaggctccaaagaggaagggaaagtgaccaag
atgcgcggaggcgaggagctgaaactgaccagcaccactttcgccctgaccggggactcg
gcccacaaccaagccatggtgcactggtcggggcacaacagcagcgtgattctcattcta
acaaagctctacgacttcaacttggggagcgttactgaaagctcgctgtggaggtcaacg
gactatggcactacctatgaaaagctaaatgacaaagtgggcctgaagactgtgctgagc
tacctttatgtcagtcctacgaacaagaggaagataatgctcctgggcgacccggagatt
gagagcagcatattgattagctctgacgaaggggccacgtatcaaaagtaccggctgaac
ttttacatccagagcctgttgttccaccccaagcaggaggactggattctggcatacagt
ctcgatcaaaagatgtatagctctgtggattttggaagacgctggcagctaatgcatgag
cggatcactccaaacaggttttactggtccgtaacgggtttggataaggagcctgacctt
gtgcacatggaagcccggacagctgatggacacgcccactatataacctgtcggatccag
gagtgctcggagactaccagaagcggaccgtttttgcgctccatcgacaccaactcactt
gttgtccaggatgaatatgtctttattcaggtgactgctggtggaagagcaaattactat
gtgtcgtacaaaagggaacccttcgctcaaattaaattgcccaaatactcactaccaaag
gacatgcatattattagcacggatgagaatcaggtgtttgcagccgtgcaggagtggaac
cagaacgatacgtacaacctttatatatctgatacccgaggggtctacttcacgctggcc
ttggagaatgtgaagagcagccggggactggagggaaacatcatcattgacctttatgag
gtagcagggatcaaaggcatattcctggctaataagaagatagaggaccagataaagact
ttcatcacctacaacaagggcagagactggcgcttgctgcaggctcctgacaccgatctg
agagggggtcctctacactgccagctgcctttttgttccttgcacctgcatttgcaaatc
tcagagaatccatacacatcaggaagtatctccagcaaggagacggctcccgggcttgtg
gtggctacaggcaacgttggctctgaactctcatataccgatatcagcacgttcatatct
tctgatgccggaaactcatggagacagatcttcgaggaagaatacaatgtgtggtatctc
gactggggtggggcacttgtggccatgaagcacacgtcaatgcctatccggcatttgtgg
gtgagtttcgatgaaggaagatcctggagtaaatatgccttcacatcgacgccgcttttt
gtggatgggtccctcgtggagccgggcatagagacgcagctaatgacaatttttggccac
ttcagtctccgctctgaatggcagctggtcaaagtggactacaaatccatcttcagcagg
aggtgcaacaaagaggactaccaaacctggcacctgcacaatcagggtgagccttgcgtc
atgggagagaggaagatctataagaaacgcaagcctggagcccagtgtgccctgggtcga
gactactccagaaccgttgtatcagaaccttgtgtctgtgccgaatgggacttcgagtgt
gactatggctatgaaaggcacagtaacaaccagtgcatgccagctttctggttcaacccg
tcctccttgccaaaagactgcagtctcggccagagctacctgaacagcaccgggtatcgg
aggattgtgtctaacaattgcacggatgggctgcgggaaaaatacgtggccaaagcggag
cagtgccccggcaaagccccgcgtgggctgcacgtcctcaccaccgacggcaagctgctt
gcccagcaagggcacaacaccaccttcatcatccttatggaagagggcgatctccagagg
acaaacatccagctggatttcggagacggtattgccatgtcctatgctaatttcagcccc
atagaggagggcatcaggcatgtttataagagcgctgggatctttcaggtgacggcctac
gcggaaaacagcctgggctccgacactgctgtcctcttcctgcatgtggtctgtccagtg
gagcatgtccatctgaacgtacccttcgttgccattaggaataaggaagtcaaccttacc
gcggtggtatggccaagtcaatcgggcaccctaacctacttctggtggtttggtaacagc
accaagcccctcatcaccctagaaagcagcgtctcctacaccttcgccaccgaggggacg
aacaccatcacggtgcaggtctctgctgggagtgccctcctgcaggacacgaaggacatc
gccgtgcatgagtatttccagtctcagctcttgtcgttttcccctaatctggattaccac
aatcctgacatccccgagtggagacaagatattagcaaagtgatcaagcgagctctaatg
caggtgaccggtatcctcgatgagcagattttggtggcggtatttcctggcctgcccacc
tccgctgagctcttcatactaccccacaaaaacacaacggagaggaggaaaggccatgaa
ggcgatctggagcaggttgttgaactcctctttaatgctctcaaccagaacctggtccag
tttgagctgaagcctggcgtcgaagtcatcgcgtacgtcactcagttgacgttagcacct
ctcgtggattccagcaccgggcacagcagttcggcgatgttgatgttgttgtctgtggtc
tttgtcggcttggctgtttttttaatctacaaatttaaaaggaaaatcccgtgggttaac
atctacgctcaagtccagcacgacaaggaacaggagatgatcggttccgtcagccaaagc
gaaagtgcccccaagatcgcactgaccgagttcactgaccctgaggagctaatggagaaa
gaactggatacgcgggttataggaagcatctcgacaattgctaacagcgaaagcacaaag
gaaatccccaactgcactagtgtttaa
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