Trachemys scripta elegans (red-eared slider): 117880668
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Entry
117880668 CDS
T07347
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117880668 (RRP9)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
90S particles
Other 90S particles
117880668 (RRP9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_RIG_2nd
WDR54
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
117880668
NCBI-ProteinID:
XP_034632920
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All DBs
Position
7:complement(47114446..47128464)
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AA seq
481 aa
AA seq
DB search
MAASGAKKKQQQRAAAAGGAGRRRRKVPDAEEKSWQKAGSKLNEEISSDSDAENPTFGGK
RKKENEAEEIEETAQEKKLRLAKLYLEQLRQQEEEKAEEEALEKDLVAGRLKEDVLEQKG
KLQRLIAKDLQPPDTAAIRVLRGHQLPITCLVISPDDKCIFSAAKDCSIIKWDVESGKKL
HVIPGGKKGTEAQHVCHTAHVLSMAISSDGKYLATGDRNKLIMIWEAVTCKHLYKFTGHR
DAVTGLSFQKGTHQLYSASHDRSVKVWNVAENAYVETLFGHQDAITGLDSLSRECCVTSG
GRDGTVRVWKIPEESQLVFYGHQGSIDCVQLINEEHMVSGADDGSVALWGLSKKKPLTTV
RQAHSNHGAQGLEQPYWISSVATLLNSDVVATGASRCSHSASVRLWKCGEGFRRLEPLFD
IPLIGFVNSLKFSSAGDFLVVGVGQEHRLGRWWRIKEAKNSICIIPLQRTTAGSAQPADG
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcgggagctaagaagaaacagcagcagcgagcggccgcggcggggggagcc
gggcgcaggcggcgcaaggtccctgatgcagaggagaaatcctggcagaaagctggctcg
aagctgaatgaggagatctccagcgactccgatgcagagaaccctacatttggtgggaag
cggaagaaggagaatgaggcagaagagattgaagagacggcacaggagaagaagctgaga
ttagccaaactttacctggagcagcttcgacagcaggaggaagaaaaagcagaagaggag
gccttggaaaaggacttggttgctggccgactgaaggaagatgtgcttgaacagaaggga
aaactgcagcgactgatcgccaaagatttgcagcctccagatacagcagccatccgagtg
ctgcgtggtcaccagctgcccatcacctgcctggtcatctctccagatgacaagtgcatc
ttctcagctgccaaagactgctccatcatcaaatgggatgtggagagcgggaagaagttg
cacgtgatccctggagggaagaaggggacagaggctcagcacgtctgccacacagcacat
gttctctctatggccatctcgtcagatggaaaatacctggccacaggagacagaaacaaa
ctgatcatgatctgggaggctgtcacatgcaagcacctgtataaattcactggccatcga
gacgctgtgacgggcttgtcgttccagaagggcactcaccagctgtacagcgcctcgcac
gatcgctctgtcaaagtctggaacgtggctgagaacgcctacgtggaaactctgttcggg
caccaggatgcgatcacggggctggacagcctgagccgggagtgctgtgtcacgtcaggc
gggcgagacggcaccgtccgggtctggaagatccctgaggagtctcagcttgtgttctac
gggcaccagggctccatcgactgcgtccagctgatcaacgaggagcacatggtgtccggc
gcggacgacgggtcggtcgccctttggggcctttcaaagaagaagccgctcacgacggtg
aggcaagcgcacagtaaccacggcgcccagggcctggagcagccgtactggatctcctca
gtggccaccctgctgaacagtgacgttgtagccacaggtgcctcgcgctgctcgcacagc
gccagcgtgcggctgtggaagtgcggtgagggattccgaaggctggagccgctcttcgac
atccccctgatcggctttgtcaacagcttgaagttctccagtgctggggatttcctggtt
gttggggtcggacaggaacacaggttgggccgctggtggcgaatcaaagaagccaagaac
agcatctgcatcatcccgctgcagaggacgacggctggcagcgcacagccagctgacggc
tcctaa
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