Trachemys scripta elegans (red-eared slider): 117880680
Help
Entry
117880680 CDS
T07347
Name
(RefSeq) putative neutral ceramidase C isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00600
Sphingolipid metabolism
tst01100
Metabolic pathways
Module
tst_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117880680
Enzymes [BR:
tst01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
117880680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
117880680
NCBI-ProteinID:
XP_034632952
LinkDB
All DBs
Position
7:complement(91076079..91133035)
Genome browser
AA seq
737 aa
AA seq
DB search
MGEKCKSRFSCLEVVLIVLFMLMTIIALILLVLLFVPKKTRTADNNGKLLKAAGSKNYLI
GVGRADCTGPVAEVPLMGYANPDQLAGGILSRLYSRAFIVAEPDDSKRVVFVSADIGMVS
QRLRLEVIKQLKSKYGELYRQDNVILSGTHTHSGPAGYFQYTIFLLTSKGLIKPSLNALV
NGIIKSIDIAHQNMKKGRLFINKGLVENSQINRSPYSYLQNPESERNRYSSNTDKEMVVL
KMVDVNGQELGLLSWFAIHPVSMNNTNHLINSDNVGYASYLFEQEKNKGLLPGEGPFVAA
FASSNLGDVSPNIKGPHCINTGESCDNPNSYCPVGGAKMCMAAGPGSDMIDSTKIIGQNL
YLKAKELYNLASQEVTGPLHSAHQWVNMTDVTVQLNATHTGKTCKPALGYSFAAGTIDGV
GFFNFTQGSLEEQPFWETIHNQLLGEPSNETKECHKPKPILLNTGEISLPYPWHPEIVDV
QLFTIGSLSIVAFPGELTTMSGRRLREAIKNEFESHGTQGMNVVIAGLCNVYTHYITTYE
EYQVQRYEAASTIYGPHTLSAYIQLFRGLAKAVATNTVQDLPNGPEPPFFNIINMTLLPV
VLPDVAPVSKTFGDVLQEVQPLYRVGEVAEATFVGANPRNSAQNTTLKTFLTVEKYDNIS
GNWHVMYNDASWDTRFYWTKGFLGRSKAKVEWHIPSSTEPGLYRIQYFGHYKVQPILKPV
QFYAFNGTSSVFQVVKL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaagtgcaaatcccgtttctcgtgcctggaagtggtactcattgtcctgttc
atgctgatgacaataattgctttgattcttctagttcttctctttgtccctaaaaaaacc
aggactgcagacaataatggcaagttacttaaagctgctggttctaaaaactacctgatt
ggtgttggtcgagctgactgcactggtccagttgcagaagtccctttgatgggctatgcc
aatccagaccagctggctggtggaattctctctcgtctatatagtcgagctttcattgtg
gcagagcctgatgattccaaaagagtggtgtttgttagtgctgacataggcatggtgtcg
caaagacttaggctggaggtaatcaagcaattgaagagtaaatatggggagctatacaga
caagacaatgttatactgagtggtactcacacccattcaggacctgcaggctatttccaa
tatactatctttttgctaactagcaagggtcttatcaaaccatcccttaatgcacttgta
aatgggattataaagagcattgatatagcacaccagaatatgaaaaaaggaagacttttt
atcaataaaggtttggtagaaaatagccaaatcaacagaagtccttactcttatcttcag
aatccagagtctgaaagaaacaggtattcatcaaatacagacaaagaaatggtggtgctg
aagatggtcgatgtaaatggacaggagctaggccttctcagctggtttgcaattcatcct
gtcagtatgaacaacacaaaccatctcataaatagtgacaacgtgggctatgcatcttac
ctgtttgaacaagagaagaacaaaggactgcttcctggagagggaccctttgtagcagcc
tttgcatcatccaacctgggagatgtatcacccaatatcaaaggcccacactgcataaac
acaggagagtcatgtgataaccccaacagttactgtccagtcggcggggctaaaatgtgc
atggctgcaggtcctggcagtgatatgattgacagtacaaaaattataggacaaaatctc
tatttgaaagcaaaggaactgtataatttagcttcccaggaggtaacaggacctctccat
tcagctcaccagtgggtgaacatgactgatgttactgtccagctcaatgccacccataca
ggtaaaacatgtaaaccagccttgggctacagctttgcagcaggtactatcgatggagtg
ggattcttcaatttcacacaaggttcactagaagagcagccattctgggaaactattcat
aaccagctgcttggagagccatccaatgaaacaaaagagtgccacaaacctaagccaatc
cttttaaataccggagagatttcattgccttatccatggcaccctgaaatagttgatgtt
cagctttttaccattgggtccctctcaatagttgcttttccaggagagctgacgacaatg
tcaggacggagactacgggaagctattaaaaatgaatttgaatcccacgggacccaggga
atgaatgtcgtaattgcaggcttatgcaatgtttatacccattacattactacttatgaa
gaataccaggttcaacgatatgaggcagcatccaccatttatgggccacacactctctct
gcttatattcagttgttcagaggactggccaaggctgttgctacgaatacagttcaggat
ttgccaaatggtccagagccaccattcttcaacataatcaacatgactttgttacctgtt
gttcttcctgatgttgcaccagtcagtaaaacatttggggatgtgttacaggaagtacaa
ccactgtacagagtgggagaagttgctgaagcaacttttgtaggtgcgaaccccaggaat
tctgctcagaacactacactcaaaaccttccttacagttgagaaatatgataacatttca
ggaaattggcatgtaatgtataatgatgcctcatgggataccagattttactggaccaaa
ggatttcttggtcgcagcaaggccaaagtagaatggcatattccaagttctacggaacca
gggctctacagaatacaatactttgggcactacaaggttcaaccaattctgaagccagtt
cagttttatgcattcaatggcacctcttcagtatttcaagttgtaaaattgtag
DBGET
integrated database retrieval system
