Trachemys scripta elegans (red-eared slider): 117880730
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Entry
117880730 CDS
T07347
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117880730 (RRP12)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
90S particles
Other 90S particles
117880730 (RRP12)
Pre-60S particles
Other pre-60S particles
117880730 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
DUF6780
NAM-associated
Motif
Other DBs
NCBI-GeneID:
117880730
NCBI-ProteinID:
XP_034633047
LinkDB
All DBs
Position
7:complement(125508547..125529087)
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AA seq
1291 aa
AA seq
DB search
MGKAGRLRSGAARKLQRWRKGHSSDSNPESRRHRLAARSRFFSRPAEKSDLTVDALKLHN
ELQSGSVRSEQAGQGAQLCMEEDDGAAVTEKSSRTFLSGLSDCTNLTFSKVQRFWESSSA
AHREICAVLAAVTEVIRSQGGTESETEYFAALMTTLEAVESPESLAAVAYLLNLVLKRVP
GPVLIKKFSDTSKVLMGIMASQAGSGPSSALRWVLSCLATLLRKQDLAAWSYPVTLQVYH
GLLSFTVHAKPKVRKEAQHGVCSILKGSEFLFGDTAPTHHPAAQSTARFCVQEIEKSGGT
KEATTTLHVLTLLRDLLPCLPLAVVKTCCETLLRVMTLSHVLVTACAMQAFHSLFSAQPG
LACLSAELNAQIITALYDYMPSENDLQPLLAWLAVMEKAHSNLARLQRDLCWGHLPRLFT
AAVSCLLSPHPQVLAAATQTLKALLSECVAPHMAELGPVSASASGPASHVCRMFRAVEEG
LTYRFHAAWASVLQVLRAFFEVCGKQCHPFMRKCLQSLCDLRHSPHFPHTSELDRAVGAA
VASMGPEVLLQAVALEIDGTEETLDFPRSWLLPVIRDHVQGTRLSFFTSYFLPLAATLKS
RAAELAQAGKSLESKIYDTLQWQIWTMLPGFCTRPTDVTASFKGLARTLGTAISERADLR
LTVCQALRTLISKGCETDAERAEVGRFAKNFLPILFNVYSQPGDAGGGAAHRRAVLDTIR
TYLTITEQQMVCGFLEKASEKLTGPESTEFTRLSILDLIVAMAPYADEPSLGALYRTIQP
SLQSKEHGVQKKAYRVLEEVCAAPRLPCQAFVRSHLDQLKRDLLGSLQSAASPAKRPRLK
CLFHIVKQLTAEHEDFVVALVPEVILCTKEVSVGARKNAFLLLVEMGEAFLRFGPTPQGA
MQRFLLLVYAGLTGSVTMISCTLLALTRLLFQFKDHMGLAVAEQLLQNVCLLLGSRTRDV
VKAALGFLKVALLLLDAQLLAKHVQTMLEAVGRLTDDMRRHFRMKLRNLFTKFIRKFGFE
LVRGLLPAEYHKVLLNIRKAEARSRKQRALKQAVAASEEEAPAQPRGDSVEELLADSDSE
QEEGERRGGREQRKQARQKSQAWLKEGEGDEPLNFLDPNVAQRVLATKPGGGRARGASHD
FKVSADGRLIIREGPEDEDDEGAKGVDEEMADLMQEVGIRSKKAQKRRFREEAEDEEPED
GTQMHYKAGGSGIHRRLGTGPALGADYKAKKGRGDVKKKGRLDPYAYIPLNRAKLNRRKK
AKMQGQFKGLMKGAQRGAQTGRKHRQKERHV
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggccggcaggctccgctccggggccgcccgcaagctccagcgctggcggaag
gggcacagcagcgacagcaaccccgagagccgccgccaccgcctggccgcccgcagccgc
ttcttcagccggcccgcggagaagagtgacctgactgtggatgcgctgaagttacacaat
gagctacagtcggggtccgtgcgctcggagcaggcaggccagggcgcccagctctgcatg
gaggaggacgatggagccgctgtcaccgagaagtcctcgcgcaccttcctgagcggcttg
agcgactgcaccaacctcaccttcagcaaagtgcagcggttctgggagtccagctccgcc
gcgcacagagagatctgcgcggtgctggctgcggtgacggaggtgatccgctcgcagggc
ggcacggagagcgagaccgagtacttcgcggcgctgatgacgacgctggaggccgtggag
tcgccggagtcgctggctgctgtcgcctacctgctcaacctggtgctgaagcgggtgcca
gggcccgtgctgataaagaagttctcggacacctccaaagtgttgatgggcatcatggcc
tcgcaggccggcagcggcccctcctctgccctgcggtgggtgctctcctgcctggccacg
ctgctgcggaagcaggacctggcagcctggagctaccccgtcacgctgcaggtttaccat
ggcttgctcagcttcacggtccacgccaagcccaaggtgcggaaggaagcccagcacggc
gtctgctccatcctgaagggcagcgagttcctgttcggggacacggctcccacgcaccac
ccggctgcgcagtccacagcccggttctgtgtgcaggagatcgaaaagtccggaggtacc
aaggaggccaccaccaccctgcatgtcctgaccctgctccgggacctgctgccctgcctg
ccgctggccgtggtgaagacctgctgcgaaaccctgctccgcgtcatgaccctcagccat
gtgctggtgacggcgtgcgccatgcaggccttccacagcctcttcagtgcccagcctggt
ctggcgtgcctgtctgccgagctcaacgcccagatcatcaccgccctgtacgactacatg
cccagcgagaacgacctgcagcccctgctggcctggctggccgtcatggagaaggcacac
agcaacctggccaggttgcagagggacctgtgctgggggcacctcccccgcctcttcacg
gctgctgtgagctgcctcctctccccccacccacaggtgctggcggccgcgacgcagacg
ctcaaggctctgctgagcgagtgcgtcgctccccacatggccgagctggggcccgtttct
gcctctgcctccggacccgcctcccacgtctgcaggatgttcagggcggtggaggagggc
ttgacgtaccgattccacgcggcgtgggcctccgtgctgcaggtgctgcgggccttcttc
gaggtgtgcgggaagcagtgccatcccttcatgaggaagtgtctccagtccctgtgcgac
ctgcgccactccccacacttcccccacaccagcgagctggaccgggcggtgggggctgcc
gtggccagcatgggccccgaggtgctgctgcaggctgtggccctggagatagacggcaca
gaggagacgctggatttcccccgcagctggctcctgccggtgatccgggaccacgtccag
ggcacgcggctcagcttcttcaccagctatttcctgcccctggcagccaccctgaaaagc
agagccgcggagctggcccaggccgggaagagtctggagtccaagatctatgacacgctg
cagtggcagatctggaccatgctgcctggcttctgcaccaggccaacggacgtgactgcc
tccttcaaagggctggcgcggacgctgggcacagccatcagcgagcgggcagacctgcgg
ctcaccgtctgccaggccctgcgcacgctcatcagcaagggctgcgagacggacgccgag
cgagcggaggtcggccgcttcgccaagaacttcctgcccatcctgttcaacgtgtacagc
cagccgggggacgctgggggcggcgcagcccaccggcgcgccgtgctggacaccatccgc
acgtacctgacgatcactgagcagcagatggtgtgcgggtttctggagaaagccagcgag
aaactgaccggccccgagagcacggagttcaccaggctctccatcctggacctgatcgtg
gccatggcgccctacgccgacgagccctccctaggcgccctctaccgcaccatccagccc
tcactgcagagcaaggagcacggggtgcagaagaaggcgtaccgcgtgctggaggaggtg
tgcgcggccccccggctcccctgccaggccttcgtccgcagccacctggaccagctgaag
agagatctgctgggctccctgcagagtgccgcctccccggccaagaggccgcggctgaag
tgcctgttccacattgtgaagcagctgactgctgaacacgaggacttcgtggtggccctg
gtcccagaggtgattctctgcaccaaggaggtgtcggtgggggcccggaagaacgccttc
ctgctgctggtggagatgggggaggccttcctccgctttggccccacaccgcaaggggcc
atgcagcggttcctgctcctggtctacgcgggactgacaggctcggtcaccatgatcagc
tgcaccttgctggcgctgacccgcctcctcttccagttcaaagatcacatggggctggcg
gtggcggagcagttgctgcagaacgtctgtctgctgctgggctcgcgcacgcgggacgtg
gtcaaggcggccctgggcttcctcaaggtggcgctgctgctgctggatgcccagttactg
gccaagcacgtccagacgatgctggaggccgtggggcgtctgacagacgacatgaggcgt
cacttccgcatgaagctgagaaacctcttcaccaagttcatccggaagttcggcttcgag
ctggtgcgggggctgctgcccgccgagtaccacaaggtgctgctgaacatccgcaaggcc
gaggcccggagccgcaagcagcgggccctgaagcaggcggtggccgcgagcgaggaggag
gcgccggcgcagcccaggggagacagcgtggaggagctcctggccgactcagactcggag
caggaggagggcgagaggcgtggcgggagagagcagaggaagcaggcgcggcagaagagt
caggcctggctgaaggagggcgaaggggacgagcccctcaacttcctggaccccaacgtg
gcccagagggtgctggctacgaagccgggcggcggcagggccaggggagcgagccatgac
ttcaaggtttcggcggacgggcgcctgattatccgcgagggccctgaggacgaggacgac
gagggagccaaaggagtggatgaggagatggccgacctgatgcaggaagtggggatccgg
agtaagaaggctcagaagcgccggttccgggaggaggcggaggatgaggagccggaggat
gggactcagatgcactacaaagctggaggctccggcattcaccggcggctgggcacaggg
ccggcacttggggctgactacaaggccaagaaaggccgaggtgacgtgaagaagaaaggc
cggctggacccctacgcctacatcccgctgaacagagccaagctcaaccgaaggaagaag
gcgaagatgcagggacagttcaaggggctgatgaagggggcccagcggggtgcgcagacc
ggccgcaagcaccgccagaaggagcgtcacgtgtga
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