Trachemys scripta elegans (red-eared slider): 117880839
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Entry
117880839 CDS
T07347
Symbol
VEGFB
Name
(RefSeq) vascular endothelial growth factor B isoform X1
KO
K05448
vascular endothelial growth factor A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04020
Calcium signaling pathway
tst04370
VEGF signaling pathway
tst04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117880839 (VEGFB)
04370 VEGF signaling pathway
117880839 (VEGFB)
04020 Calcium signaling pathway
117880839 (VEGFB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117880839 (VEGFB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117880839 (VEGFB)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117880839 (VEGFB)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Growth factors (RTK binding)
117880839 (VEGFB)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117880839 (VEGFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
VEGF_C
Motif
Other DBs
NCBI-GeneID:
117880839
NCBI-ProteinID:
XP_034633241
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All DBs
Position
7:complement(30362506..30368046)
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AA seq
274 aa
AA seq
DB search
MRAPRETLHLLLATALQLIGCAAKAPQPQTKGTHPLGEVIQWMEVYNRSFCQPKEMLVPV
SEEHPDEVEHLLAPSCVPLRRCAGCCADEGLQCVPTRMHVVVMEVMKTRYLYSHLDQLAF
VEHSACECRPKTNSKVNPERPVRPRGKNSIGRKHKKKRPPEQDSPHLPSCPPCSDKRRRQ
DPRTCQCRCRRRSQHCQDRGLELNEHSCSHSVLPRGVRSCADDLMGEGGDLGPASPPPPP
KPSSSLDPEQDFGPECPLLERSPRKTSKAALEWT
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagagccccccgggagaccttgcacctcctgctggctacagccctgcagctgatcggc
tgcgcagctaaggcaccacagccccagacgaaggggacccacccgctgggggaagtgata
cagtggatggaggtttataaccgcagcttctgccagccgaaggagatgctggtgcccgtg
agcgaggagcacccagatgaggtggagcacctgctggcaccctcctgcgtgcccctgcgt
cgctgtgctgggtgctgtgccgacgaggggctgcagtgtgtgcctacccgcatgcatgtg
gtggtgatggaggtgatgaaaacccgctacctgtacagccacctggaccagctggccttc
gtagagcacagtgcctgcgaatgcagaccaaagacaaatagcaaagtaaatccagaaagg
cctgtacggcccagggggaaaaacagcattggacgcaaacacaaaaagaagagaccccct
gaacaggactccccccacctgccctcctgcccaccctgctcagacaaacggaggcgccag
gatcctcggacatgccagtgccgctgccggcgcaggtcccagcactgccaggaccggggc
ttggagctcaatgagcactcatgcagccactctgttctcccccgaggtgtgagaagctgc
gcagatgatctgatgggggaggggggtgacctgggaccagcctctcctcccccccccccc
aagcccagctcttcattggatccagaacaagactttggccctgagtgccccctgctggag
aggagcccaaggaagacgagcaaggctgccctggaatggacctga
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