Trachemys scripta elegans (red-eared slider): 117880841
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Entry
117880841 CDS
T07347
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117880841 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117880841 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117880841 (LDB3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117880841
NCBI-ProteinID:
XP_034633247
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All DBs
Position
7:complement(73736564..73951387)
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AA seq
859 aa
AA seq
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MSYNVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSHMNQGDLVVAIDGVNTDGM
THLEAQNKIKSASYNLSLTLQKSKRPAPVPTATPKVDSPRPVIPHQKDPALEISGNRTTF
SPLTSTATGPLGSILATNGTFSGYLSKQEISCSNSSSFLKTTAVRTSMASLSVTPDISPA
KSNLGSKLSPVFTDGSSPKHQLSPARQYNNPIGLYSAETLKEMAEMHKLSLKRRASEGGL
PRGTEYVERFNPNVLKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAG
QAQAQGGELAGESPLASLPVKDPHIDSASPVYQAVLKTQNKSEDELDDWTRRSANLQSKS
FRILAQMTGTEYMQDPDEEALRRSSGKENVAAAAENSPTGSHHVAQYVTSSVWHPPKSRT
MDANIDKAKPVASKGSVRFGTGTSQREASYIRTGQKAPLTSSNNQSTPVEHAPVSTSSAS
APVPVASANQSATATQNTSSQMTPPSATPISVVQDSFSSSFQSFNRHSSTSISYQSKKRG
TGQSYTSTPVSQGTASSSGYSESPVPAPKPRVVTTASIRPSVYQPAPAPAQAPVHSYAPG
KADPSCRPPWVTDDSFSQKFAPGKTTTSVTKHTLPRGAPAPSPASTSAYSSPSIPASSQT
PAVARGTIQRAERFPASNRTPLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVC
FVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLF
HMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQP
FYSKKDKPLCKKHAHAINV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaacgtgactctaaatggacctggaccatggggtttccgactgcaaggggga
aaggacttcaacatgcccttgaccatatccagaatcacccctggcagcaaagcagcccag
tcccacatgaaccagggggaccttgtggtagccattgatggagtcaacacagatggcatg
acccacttagaggcccagaacaagatcaaatcagccagctacaacctgagccttaccctt
caaaaatctaaacgcccagctccagttccaacagccacacctaaagttgactctcccagg
cctgtaattccccatcagaaggaccctgctttggaaatcagtggcaacagaacaaccttc
agtcctctaactagcacagcgactgggcctttgggtagtattttagccaccaatggaacg
ttttcaggctacctcagcaagcaggagatcagctgttcaaatagctcttccttcttaaag
accactgcagttagaacttccatggcctctctatctgtgacacctgacatttcacctgca
aagagtaacctaggttcaaaactaagtcctgtgttcactgatggcagtagtcctaaacac
cagctgagccctgcaaggcaatataacaaccccattggcctttactcagcagagactcta
aaggaaatggctgagatgcataaattaagtctcaaacgaagggcttcagaaggtggactt
cctagaggcactgagtatgtggaacgcttcaaccctaatgtcctgaaggactctgctctg
tctacacacaaacccattgaggtgaaaggcccgggtggcaaggccactataattcatgcc
cagtataacaccccgatcagcatgtattcccaggatgctatcatggatgccatcgcaggc
caggcacaggcccaaggtggtgaacttgctggtgaatctccattggctagccttcctgtt
aaagatcctcacatagatagtgcctctccggtgtatcaggctgtgcttaaaactcagaac
aagtctgaggatgagcttgacgactggactcgccgttctgccaatctgcagtccaagtct
ttccgcatccttgcccagatgaccggaacggagtacatgcaagacccggatgaagaagcc
ctgaggagatcaagtggcaaggaaaatgttgctgcagcagctgaaaacagccctacaggt
tctcatcatgtggcacagtatgtgacctcaagtgtttggcatcctcctaagtcacgcacc
atggatgccaacattgacaaagctaagccagtggcctccaagggttccgtgaggtttgga
acgggtacaagtcaaagggaagccagttacatcaggactggccagaaagcccctcttact
tcatccaataatcaaagtacccctgttgagcatgcgccagtgtctaccagctctgcctct
gctcctgtgccagttgcttcagccaatcagtctgctactgctactcaaaacacatccagt
cagatgacaccaccatcagccactcccatctctgtagtacaagattccttctcttcctct
ttccaaagcttcaaccggcattcttccacctccatcagctaccagtcaaaaaagagaggt
acgggccagtcctatacatcaacaccggtttcccagggtaccgcttcttcctcaggctac
agtgaaagtccagttcctgctccaaaaccaagagttgtcactactgctagcataaggccc
tctgtctaccagccagcaccagcaccggcacaagcaccagtgcattcttatgcaccaggc
aaggctgatccttcatgccgccctccttgggtaacagatgactccttttcccagaaattt
gcacctggaaaaaccaccacctctgttaccaaacataccctgccacggggtgctccagca
ccatctcctgcctcaacttcagcctactcgtctccttcaataccagcctcttcccagact
cctgctgtagcccggggaacaattcaaagggctgagcgtttcccagccagcaaccgaact
cctctctgtggacactgtaacagcatcattcggggtcctttcctggtagccatgggtcgt
tcctggcacccagaggagttcaactgtgcttactgcaagacatctttagcagatgtgtgc
tttgtggaggagcagaacagtgtgtactgtgagcgctgttatgaacagttctttgcacca
acctgtgccagatgccataccaagatcatgggggaagtgatgcatgctctaaggcagact
tggcacacgacttgctttgtctgtgctgcctgtaagaaaccgtttgggaatagcctcttc
cacatggaggatggggagccctactgtgagaaagattacattgctttgttcagcacaaaa
tgccatggctgtgattttcctgttgaagcaggagataaattcattgaagcccttggacac
acttggcatgatacctgctttatttgtgctgtgtgccatgtgaatttggaaggtcagcca
ttttactccaagaaagataagccactgtgcaagaaacatgctcatgccatcaatgtctaa
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