Trachemys scripta elegans (red-eared slider): 117880875
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Entry
117880875 CDS
T07347
Name
(RefSeq) hyaluronidase-4-like isoform X1
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00531
Glycosaminoglycan degradation
tst01100
Metabolic pathways
tst04142
Lysosome biogenesis
Module
tst_M00076
Dermatan sulfate degradation
tst_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117880875
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117880875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
tst02042
]
117880875
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117880875
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117880875
Enzymes [BR:
tst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
117880875
Bacterial toxins [BR:
tst02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
117880875
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Enzymes
117880875
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Enzymes
117880875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
EGF_Teneurin
EGF
SPE9_EGF_3rd
DUF7949
Rv0078B
Motif
Other DBs
NCBI-GeneID:
117880875
NCBI-ProteinID:
XP_034633343
LinkDB
All DBs
Position
7:45203848..45220557
Genome browser
AA seq
503 aa
AA seq
DB search
MAAKPLCRVEQTAVRPSSGRLLAWSSPAFRLHRCPLHRTVLLLLLLCPELPRGHNLKPSL
PPIVTDQPFLVAWNAPTARCWTSYEVPLSVASFSLLANAQEDFTGGNITIFYYDQLGLYP
YYLNKTTPPIAINGGCPQNASLLDHLDKMASDIATTMPSASFAGLSVIDWENWRPQWIRN
WDKKNVYRTMSAQLVRQRNPHWPDEQVELEAKWEFETAAAKFMVETLKLAQLLRPGGWWG
YYLFPECYNYHYWDDFENFTGGCPQVEVQRNNKLLWLWEQSKALYPSIYMEEVLRASLQG
KKFVQAKLSEALRVAQLPSINHSLPVFAYARPFYSYTLKELTQTDLVHTIGQAAAMGAHG
IVLWGGVEYSRNRPNCVKIQKYLTGTLGPYIVNVTTATKLCSQFVCNNHGRCLRRKMDLD
SYLHLDASSFQIRVDKAAHGPHVSVKGALTTQQRDRMRQEFTCHCYQGWRGEHCHSRGHS
NQLWAWDLCIPLVVMSAIWTWGM
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaacccctctgcagagtggagcaaactgcagtgaggcccagctcgggcagg
ctcctggcatggagctcaccggccttcaggctacacaggtgccccctgcaccgcactgtc
ttgctgctgctgctcctgtgccccgagctgcccagaggtcataatctgaagccatccttg
ccccccattgtgacagaccagccctttctggtggcctggaatgcaccaacggctcggtgc
tggacttcctatgaggtgcccctcagtgtggcctccttcagcctcctggcaaacgcgcag
gaagacttcacaggcgggaacatcaccatcttctactacgatcagctgggtctgtacccc
tactacctgaacaaaaccacgccacccatagccatcaacggcggctgcccacagaacgcc
agcctgctggaccacctggacaagatggccagcgacatcgccaccaccatgccctcagct
tccttcgctggcctgtctgtgatcgattgggagaactggaggccccagtggatccggaac
tgggacaagaagaatgtctaccggaccatgtccgcccagctggtgaggcaaaggaacccg
cactggcctgatgagcaggtggagctggaggccaagtgggagttcgagacggctgcggcc
aagttcatggtggagaccctcaagctggcacagttgctgcgccctgggggctggtggggc
tactaccttttccctgaatgctacaactatcattactgggatgactttgagaacttcact
gggggctgcccccaggtggaggtgcagcggaacaacaagctgctgtggctgtgggagcag
agcaaggcgctctacccctccatctacatggaggaggtgctgagagcctccctgcagggc
aagaagtttgtgcaggccaagctaagcgaagctctgcgcgtggctcagctgccctccatc
aaccactccctgcctgtcttcgcgtatgcccggcccttctacagctacaccctgaaggag
ctaacccagacagacctagtgcacacgatcgggcaggcagcagccatgggggctcacggc
atcgttctctggggaggtgtggaatattctcgcaaccggcccaactgtgtaaagatccag
aaatacctgactggcaccttaggcccttacatcgtcaacgtgaccacggcaaccaaactc
tgcagccagtttgtctgcaacaaccatggccgctgccttcgcagaaagatggatttggac
agctacctgcacctggacgcgagctccttccagatccgagtggacaaagccgcccatgga
ccacacgtgtccgtgaaaggagccctcaccacccagcagagggacaggatgagacaagag
ttcacatgtcactgctaccagggctggaggggggaacactgccattcccggggtcacagc
aaccagctctgggcatgggacttgtgcatccccctggtggtgatgtctgcaatatggacg
tggggcatgtga
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